KEGG   Cricetulus griseus (Chinese hamster): 100762124
Entry
100762124         CDS       T02813                                 
Symbol
Copa
Name
(RefSeq) coatomer subunit alpha
  KO
K05236  coatomer subunit alpha
Organism
cge  Cricetulus griseus (Chinese hamster)
Brite
KEGG Orthology (KO) [BR:cge00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cge04131]
    100762124 (Copa)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cge04147]
    100762124 (Copa)
Membrane trafficking [BR:cge04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    100762124 (Copa)
Exosome [BR:cge04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100762124 (Copa)
  Exosomal proteins of bladder cancer cells
   100762124 (Copa)
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 Beta-prop_EML_2 TPR_COPA_B Beta-prop_WDR36-Utp21_1st WD40_Gbeta EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR75_1st WD40_RFWD3 WD40_MABP1-WDR62_1st ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 100762124
NCBI-ProteinID: XP_027274761
UniProt: G3H7Y0
LinkDB
Position
5:complement(20729885..20778442)
AA seq 1224 aa
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKIQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLDALCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDP
EKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGALAADIDIDTV
GTEGWGEDAELQLDEDGFVEASEGLGEDALGKGQEEGGGWDVEEDLELPPELDIPAGVAG
GAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVIQFGPYKQLFL
QTYARGRTTYQALPCLPSMYSYPNRNWKEAGLKNGVPAVGLKLNDLIQRLQLCYQLTTVG
KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLCMEIERKKLPKESLEQ
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQ
TRKILSACEKNPTDACQLSYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYAPEFKGQI
CRVTTVTEIGKDVIGLRISPLQFR
NT seq 3675 nt   +upstreamnt  +downstreamnt
atgctaaccaaattcgagaccaagagcgcgcgggtcaaaggccttagttttcatcccaaa
agaccctggatcctgaccagtttacacaatggggtcatccagttatgggactatcgcatg
tgcactctcattgacaagtttgatgaacatgatggtccagtgcgaggcattgacttccat
aagcagcagccactgtttgtctctggaggagatgactataagattaaggtttggaattat
aaacttcggcgctgcctcttcacgttgcttgggcacttagattatattcgtaccacattt
tttcatcatgaatacccttggattctgagtgcctcagatgaccagaccattcgagtgtgg
aactggcagtctagaacctgtgtctgtgtgttaacaggacacaaccattatgtaatgtgt
gctcagttccacccctctgaagacctggtggtatcagctagcctggaccagactgtccga
gtttgggatatttctggtctaaggaaaaaaaatttgtctcctggtgctgtggagtctgat
gtgagaggcatcactggggttgatctgtttggaactacagatgcagtggtgaagcatgtc
cttgagggtcatgatcgtggagtaaactgggctgcctttcaccctactatgccccttatt
gtgtctggggcagatgaccggcaagtgaagatctggcgcatgaatgaatcaaaagcatgg
gaggttgacacctgccggggccattacaacaatgtatcttgtgctgtcttccaccctcgc
caagagctgatcctcagcaattctgaggacaagagtattcgagtctgggacatgtctaag
aggaccggggtccagactttccgccgggatcatgatcgtttctgggtcctagctgcccat
cccaacctcaacctgtttgcagcaggccatgatggtggaatgattgtatttaagctggaa
cgtgaacgaccagcctatgctgttcatggcaatatgctgcattatgtaaaggaccgattc
ctccgtcagctggatttcaacagctccaaagatgtagctgtgatgcagttgaggagtggt
tccaagtttccagtgttcaacatgtcatacaatccagcagaaaatgcagtcctactgtgc
actagagcaagcaatttagagaatagtacctatgatctatacactatccccaaagatgca
gactcccagaatcctgatgcccctgaagggaaacgatcctcaggcctgacagcagtttgg
gttgctcggaatcggtttgctgtcctagatcgcatgcattcgcttctgataaagaacctg
aagaatgagatcaccaagaaaatccaggtgcccaactgtgatgaaatcttctacgctggc
actggcaacctcctgcttcgggatgcagattccatcacactctttgatgtccaacaaaag
cggactctggcatcagtgaagatttccaaggtgaaatatgttatctggtcagcagacatg
tctcatgtagcactactggccaaacatgccattgtgatctgtaaccgcaagctggatgct
ctgtgtaacatccatgagaacattcgtgtcaagagtggggcctgggatgagagtggggtg
tttatctataccacaagcaaccacatcaaatatgccgtcaccactggggaccatgggatc
atccgaactctggatttgcccatctatgtcacaagagtgaagggcaacaatgtatattgc
ctagacagggaatgtcgtcctcgagtactcaccattgatcccactgagttcaaattcaag
ttggccctcatcaacagaaagtatgatgaggtactgcacatggtgaggaacgccaaacta
gtgggccagtcaatcattgcttatctccagaagaagggttatcctgaagtggccctgcat
tttgtaaaggatgagaaaactcgcttcagcctagctctggagtgcggaaacattgagatt
gctctagaagcagccaaagccctggatgacaagaactgctgggagaagctgggagaagtg
gctctgctacagggtaatcaccagattgtagaaatgtgctatcagcgaaccaaaaacttt
gacaagctttccttcttgtaccttattactggcaacctagagaaacttcgcaagatgatg
aagattgctgagatccgaaaggacatgagtggccattatcagaacgccctttacctgggt
gatgtgtcagagagagtacgaatccttaagaactgtggacagaaatccctggcctatctc
acagctgctacacatggcttagatgaagaagctgagagtctaaaggaaacatttgaccct
gagaaggagacaatcccggacatcgatcctaatgccaagcttctccagccgcctgcacct
atcatgccactggataccaattggcccttattgactgtgtccaaagggttctttgagggc
tccattgccagcaaggggaagggaggagcgttggctgctgacattgacattgacactgtt
ggtactgaaggctggggagaggatgcggaactgcagttagatgaagatgggtttgtggag
gcttcagaaggtttgggagaggatgctcttggcaagggacaagaagaaggaggtggctgg
gatgtagaagaagatctggagctcccacctgagctggatatacctgctggggttgccggt
ggtgctgaagatggcttctttgtgcccccaaccaagggaacaagcccaactcaaatctgg
tgcaataactctcagcttccagttgatcacatcctggcaggttcttttgaaacagccatg
cggcttcttcatgaccaggtgggagtaatccagtttggcccctataagcaactgttccta
cagacatatgcccgaggccgcaccacctatcaagcactgccctgcttgccatccatgtat
agttaccctaatcgaaactggaaggaggcagggctaaagaatggtgtgccagctgtgggc
ctaaagcttaatgacctgatccaacgattacagctgtgctaccagctcaccacagttggc
aagtttgaagaagctgtggaaaagttccgttccattttgctcagtgtgcctcttcttgtt
gtggacaataagcaggagattgcagaggcccagcagctcatcaccatctgccgtgaatac
attgtgggtttgtgcatggagatagaaaggaagaagctgcctaaggagagcctagagcag
cagaagcgcatctgtgagatggcagcctatttcacacactcaaacctgcagcctgtgcat
atgatcctggtgttgcggacagccctcaaccttttcttcaagctcaagaatttcaaaaca
gctgccacatttgcccggcgcttgctagaacttgggccaaagcctgaagtggcccaacag
actaggaagatcctgtctgcctgtgagaagaaccccacagacgcctgccagctcagttac
gacatgcacaaccccttcgacatttgcgctgcatcttaccggcccatctaccgtggaaag
cccgtggagaagtgtccactcagtggggcctgctatgcccctgagttcaaggggcaaatc
tgcagagtcactacggtgacagagattggcaaagatgtgattggtctgaggatcagtcct
cttcagttccgctaa

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