Cricetulus griseus (Chinese hamster): 100763050
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Entry
100763050 CDS
T02813
Symbol
Pbrm1
Name
(RefSeq) protein polybromo-1 isoform X3
KO
K11757
protein polybromo-1
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03082
ATP-dependent chromatin remodeling
cge05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100763050 (Pbrm1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100763050 (Pbrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cge03021
]
100763050 (Pbrm1)
03036 Chromosome and associated proteins [BR:
cge03036
]
100763050 (Pbrm1)
Transcription machinery [BR:
cge03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100763050 (Pbrm1)
Chromosome and associated proteins [BR:
cge03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
100763050 (Pbrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
Phage_int_SAM_2
Motif
Other DBs
NCBI-GeneID:
100763050
NCBI-ProteinID:
XP_027245343
UniProt:
A0A9J7J7E9
LinkDB
All DBs
Position
1
Genome browser
AA seq
1702 aa
AA seq
DB search
MGSKRRRATSPSSSVSGDFDDGHHSVPTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDY
KDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLF
NNAKAYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDTQGTEGSSPSYL
KEILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSY
KTIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKIFYMKKAEIEHHEMAKSSLRIRTA
SNLAAARLTGPSHSKSSLGEERNPTSKYYRNKRAVQGGRLSAITMALQYGSESEEDAALA
AARYEEGESEAESITSFMDVSNPFHQLYDTVRSCRNNQGQLIAEPFFHLPSKKKYPDYYQ
QIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSTIYKRVLKLQQVMQA
KKKELARRDDIEDGDSMISSATSDTGSAKRKRNTHDSEMLGLRRLSSKKNIRKQRMKILF
NVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMM
EDMKLMFRNARHYNEEGSQVYNDAHILEKLLKDKRKELGPLPDDDDMASPKLKQSRKSGV
SPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMDME
KIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEGDE
DSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNFPNKPPLTFDIIRK
NVESNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIRIRDELCKNGEILL
SPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEEKREAEKSEDSSGTAGLSGLHRTY
SQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHL
ATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVFVCESRYSAKT
KSFKKIKLWTMPISSVRFVPRDVPLPVVRVASVFANADKGDDEKNTDNSEDNRAEDNFNL
EKEKEDVPVEMSNGEPGCHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVRDG
AAYFYGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMSCILGKCAVLSFKDFLSCRPT
EIPENDILLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIIPQKEPSPLLEK
KIQLLEAKFAELEGGDDDIEEMGEEDSEVIEPPSLPQLQTPLASELDLMPYTPPQSTPKS
AKGSAKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLETAKKAE
YEERAAKVAEQQERERAAQQQQPSASPRAGTPVGALMGVVPPPTPMGMLNQQLTPVAGMM
GGYPPGLPPLQGPVDGLVSMGSMQPLHPGGPPPHHLPPGVPGLPGIPPPGVMNQGVAPMV
GTPAPGGSPYGQQVGVLGPPGQQAPPPYPGPHPAGPPVIQQPTTPMFVAPPPKTQRLLHS
EAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGAHTTMADALW
RLRDLMLRDTLNIRQAYNLENV
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atgggttccaagagaagaagagctacctccccttccagcagtgtcagtggagactttgac
gatgggcaccattctgtgcctacaccaggcccaagcaggaaaaggagaagactgtctaat
cttccaactgtggatcctattgctgtgtgccatgaactctataacaccatcagagactat
aaggatgagcagggcagactcctctgtgagctgttcattagggcaccaaagcggagaaat
caaccagactattatgaagtggtttctcagcccattgacttgatgaaaatccaacagaaa
cttaaaatggaagagtatgatgatgttaatctgctgactgcagacttccagttgcttttt
aacaatgcaaaggcttattataagccagattcccctgaatataaagctgcttgtaaactc
tgggatttgtaccttcgaacaagaaatgaatttgttcaaaaaggagaagcagatgacgaa
gatgatgatgaagatgggcaagacactcaaggaactgaaggttcttctccaagttaccta
aaggagatcctggagcagcttcttgaagccatagttgtagccacaaatccatcaggacgg
ctcatcagtgaactttttcagaaactcccttccaaagtgcaatatccagactattatgca
ataattaaggagcctatagatctcaagaccattgctcagagaatacagaatggaagctac
aaaactattcatgcaatggccaaagatatagatcttctagcaaaaaatgccaaaacatat
aatgagcctggttctcaagtattcaaggatgccaattcgattaaaaaaatattttatatg
aaaaaggcagaaattgaacatcatgaaatggctaaatcaagtcttcgaataaggactgca
tcaaatttggctgcagccaggctgacaggtccttcgcacagtaaaagcagccttggtgaa
gaaagaaaccccactagcaagtattaccgtaataaaagagcagtccaagggggtcgctta
tcagcaattaccatggcacttcagtatggctcggaaagtgaagaggatgctgctttagct
gccgcacgttatgaagaaggggaatctgaagctgaaagcattacttcctttatggatgtc
tccaatccttttcatcagctttatgacacagttaggagctgtcggaataaccaagggcag
ctcatagccgaaccttttttccatttgccttcaaagaaaaaatacccagattattatcag
caaattaaaatgcctatatcgcttcaacagatcagaacaaaactaaagaaccaagaatat
gaaactttagatcatttggagtgtgatctgaatttaatgtttgaaaatgccaaacgctat
aatgttcccaattcaaccatctataagcgagttctgaaattgcagcaagtcatgcaggca
aagaagaaagagcttgccaggagagatgacattgaggatggagacagcatgatctcttcc
gctacttctgatactggtagtgccaaaagaaaaaggaatactcatgacagtgagatgttg
ggtctcaggaggctatccagtaaaaagaacataagaaaacagcgaatgaaaattttattc
aatgttgttcttgaagctcgagagccaggttcaggcagaagactttgtgatctatttatg
gttaagccatccaagaaggactatcctgattactataaaatcatcttagagccaatggac
ctgaaaataattgagcataacatccgaaatgacaaatatgcaggtgaagaaggaatgatg
gaagacatgaaactcatgttccgaaatgccaggcactacaatgaggagggctcccaggta
tacaatgatgctcatatcctggagaagttactcaaagataaaaggaaagagctgggacca
ctacctgatgatgatgacatggcttctcccaagcttaagcagagtagaaagagtggtgtt
tctcctaagaaatcaaagtacatgactccaatgcagcagaagctaaatgaagtgtatgaa
gctgtaaagaactatactgataagaggggtcgccgtctcagtgctatatttctaagactc
ccctctagatcagagctgcctgactactatctgaccattaaaaaacccatggacatggaa
aaaattcgaagtcacatgatggcaaacaaataccaagatatagattctatggtagaggac
tttgtcatgatgtttaataatgcctgtacctacaatgaaccagagtctttaatctacaaa
gatgctcttgtcctacataaagtcctccttgaaacccggagagacctggagggagatgag
gattctcatgtcccaaatgtgaccttgctgattcaagaacttatccataatctttttgtg
tcagtcatgagtcatcaggatgatgagggaagatgttacagtgactccttagcagaaatt
cctgctgtggatccgaactttcccaacaaacctccccttacatttgacattattaggaag
aatgttgaaagtaatcgctatcggcgacttgatttatttcaggagcatatgtttgaagta
ttggaaagagcaagaaggatgaataggacagattccgaaatatatgaagatgcagtagaa
cttcagcagttttttattagaattcgtgatgaactctgcaaaaatggagagatccttctt
tctccagcactcagctataccacaaaacatttacataacgatgttgaaaaagaaaaaaag
gaaaaattacctaaagaaatagaggaagataaactaaaacgagaagaagaaaaaagagaa
gctgaaaaaagtgaagattcctcaggtactgcaggcctctcaggcttacatcgtacctac
agccaagactgcagctttaagaatagcatgtatcatgttggagattatgtctatgttgaa
cctgcagaggccaatctacaaccacatatagtctgtattgagagactgtgggaggattcg
gctggtgaaaaatggttgtatggctgttggttttatcggccaaatgaaacattccatttg
gctacacgaaaatttctggaaaaagaagtttttaagagtgactattacaataaagttcct
gttagtaaaattctaggcaaatgtgtagtcatgtttgtcaaggaatactttaaattatgc
ccagaaaactttcgagatgaggatgtttttgtctgtgaatcaagatactctgctaaaacc
aagtctttcaagaaaattaaactgtggacaatgcccatcagctcagttagatttgtccct
cgggatgtacccttgcctgtggttcgagtggcctcagtatttgcaaatgcagataaaggg
gatgatgagaagaatacagacaactcagaggacaatcgagctgaagacaattttaatttg
gaaaaggaaaaagaagatgttcctgtagagatgtccaatggtgaaccaggttgccactac
tttgagcagcttcattacaatgacatgtggctgaaggttggcgactgtgtcttcatcaaa
tcccatggcttggtgcgccctcgtgtgggcagaattgaaaaagtatgggttcgagatgga
gctgcatatttttatggccccattttcattcacccagaagaaacggaacatgagcccaca
aaaatgttctacaaaaaagaagtatttctgagtaatctggaggaaacctgccccatgagt
tgtattctgggaaaatgtgctgtgttgtcattcaaggacttcctctcctgcaggccaact
gaaataccagaaaatgacattctgctttgtgagagccgctataatgagagtgacaagcag
atgaagaaattcaaggggttgaagaggttttcactctctgctaaagttgtagatgatgaa
atttactacttcagaaaaccaatcattcctcagaaagaaccctcacctttgttggaaaag
aagatacaattgctagaagctaagtttgctgagttagaaggtggagatgatgatattgaa
gagatgggagaagaggatagtgaggtcattgaacctccatctctacctcagcttcagact
cccctggccagtgagctggacctcatgccctacacaccccctcagtctaccccaaagtct
gccaaaggcagtgcaaagaaggaaggttctaaacggaaaatcaacatgagtggctacatt
ctattcagcagtgaaatgagagctgtgattaaagcccagcacccagactactcttttggg
gagctcagcagactggtggggacagaatggagaaaccttgagacagccaagaaagcagaa
tatgaagagcgggcagctaaagttgctgagcagcaggagagagagcgagcagcacagcaa
cagcaaccgagtgcttctccccgagcaggcacccctgtgggggctctcatgggggtggtg
ccaccaccaacaccaatggggatgctcaatcagcagttgacacctgttgcaggcatgatg
ggtggctatccgccaggccttccacctttgcagggcccagttgatggccttgttagcatg
ggcagcatgcagccacttcaccctggggggcctccacctcaccatcttccgccaggtgtg
cctggcctcccaggcatcccaccacccggtgttatgaaccaaggagtagcccccatggta
gggactccagcaccaggtggaagtccatatgggcaacaggtaggagttttggggcctcca
gggcagcaggcaccacctccatatcctggtcctcatccagctggcccccctgtcattcag
cagccaacaacacccatgtttgtggctcccccaccaaagacccaaaggcttctccactca
gaggcctacctgaaatatattgaaggactcagtgctgaatccaacagcattagcaagtgg
gaccaaactctggcagctcgaagacgggatgtccatttgtcaaaagaacaggagagccgc
ctaccttctcactggctcaaaagtaaaggggcacacaccaccatggcagatgccctctgg
cgccttcgggatttaatgcttcgagacactcttaacattcgacaagcatacaacctagaa
aatgtttaa
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integrated database retrieval system