KEGG   Cricetulus griseus (Chinese hamster): 100763050
Entry
100763050         CDS       T02813                                 
Symbol
Pbrm1
Name
(RefSeq) protein polybromo-1 isoform X3
  KO
K11757  protein polybromo-1
Organism
cge  Cricetulus griseus (Chinese hamster)
Pathway
cge03082  ATP-dependent chromatin remodeling
cge05225  Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:cge00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    100763050 (Pbrm1)
 09160 Human Diseases
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    100763050 (Pbrm1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cge03021]
    100763050 (Pbrm1)
   03036 Chromosome and associated proteins [BR:cge03036]
    100763050 (Pbrm1)
Transcription machinery [BR:cge03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     100763050 (Pbrm1)
Chromosome and associated proteins [BR:cge03036]
 Eukaryotic type
  Chromatin remodeling factors
   PBAF complex
    100763050 (Pbrm1)
SSDB
Motif
Pfam: Bromodomain BAH HMG_box HMG_box_2 Phage_int_SAM_2
Other DBs
NCBI-GeneID: 100763050
NCBI-ProteinID: XP_027245343
UniProt: A0A9J7J7E9
LinkDB
Position
1
AA seq 1702 aa
MGSKRRRATSPSSSVSGDFDDGHHSVPTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDY
KDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLF
NNAKAYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDTQGTEGSSPSYL
KEILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSY
KTIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKIFYMKKAEIEHHEMAKSSLRIRTA
SNLAAARLTGPSHSKSSLGEERNPTSKYYRNKRAVQGGRLSAITMALQYGSESEEDAALA
AARYEEGESEAESITSFMDVSNPFHQLYDTVRSCRNNQGQLIAEPFFHLPSKKKYPDYYQ
QIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSTIYKRVLKLQQVMQA
KKKELARRDDIEDGDSMISSATSDTGSAKRKRNTHDSEMLGLRRLSSKKNIRKQRMKILF
NVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMM
EDMKLMFRNARHYNEEGSQVYNDAHILEKLLKDKRKELGPLPDDDDMASPKLKQSRKSGV
SPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMDME
KIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEGDE
DSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNFPNKPPLTFDIIRK
NVESNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIRIRDELCKNGEILL
SPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEEKREAEKSEDSSGTAGLSGLHRTY
SQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHL
ATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVFVCESRYSAKT
KSFKKIKLWTMPISSVRFVPRDVPLPVVRVASVFANADKGDDEKNTDNSEDNRAEDNFNL
EKEKEDVPVEMSNGEPGCHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVRDG
AAYFYGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMSCILGKCAVLSFKDFLSCRPT
EIPENDILLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIIPQKEPSPLLEK
KIQLLEAKFAELEGGDDDIEEMGEEDSEVIEPPSLPQLQTPLASELDLMPYTPPQSTPKS
AKGSAKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLETAKKAE
YEERAAKVAEQQERERAAQQQQPSASPRAGTPVGALMGVVPPPTPMGMLNQQLTPVAGMM
GGYPPGLPPLQGPVDGLVSMGSMQPLHPGGPPPHHLPPGVPGLPGIPPPGVMNQGVAPMV
GTPAPGGSPYGQQVGVLGPPGQQAPPPYPGPHPAGPPVIQQPTTPMFVAPPPKTQRLLHS
EAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGAHTTMADALW
RLRDLMLRDTLNIRQAYNLENV
NT seq 5109 nt   +upstreamnt  +downstreamnt
atgggttccaagagaagaagagctacctccccttccagcagtgtcagtggagactttgac
gatgggcaccattctgtgcctacaccaggcccaagcaggaaaaggagaagactgtctaat
cttccaactgtggatcctattgctgtgtgccatgaactctataacaccatcagagactat
aaggatgagcagggcagactcctctgtgagctgttcattagggcaccaaagcggagaaat
caaccagactattatgaagtggtttctcagcccattgacttgatgaaaatccaacagaaa
cttaaaatggaagagtatgatgatgttaatctgctgactgcagacttccagttgcttttt
aacaatgcaaaggcttattataagccagattcccctgaatataaagctgcttgtaaactc
tgggatttgtaccttcgaacaagaaatgaatttgttcaaaaaggagaagcagatgacgaa
gatgatgatgaagatgggcaagacactcaaggaactgaaggttcttctccaagttaccta
aaggagatcctggagcagcttcttgaagccatagttgtagccacaaatccatcaggacgg
ctcatcagtgaactttttcagaaactcccttccaaagtgcaatatccagactattatgca
ataattaaggagcctatagatctcaagaccattgctcagagaatacagaatggaagctac
aaaactattcatgcaatggccaaagatatagatcttctagcaaaaaatgccaaaacatat
aatgagcctggttctcaagtattcaaggatgccaattcgattaaaaaaatattttatatg
aaaaaggcagaaattgaacatcatgaaatggctaaatcaagtcttcgaataaggactgca
tcaaatttggctgcagccaggctgacaggtccttcgcacagtaaaagcagccttggtgaa
gaaagaaaccccactagcaagtattaccgtaataaaagagcagtccaagggggtcgctta
tcagcaattaccatggcacttcagtatggctcggaaagtgaagaggatgctgctttagct
gccgcacgttatgaagaaggggaatctgaagctgaaagcattacttcctttatggatgtc
tccaatccttttcatcagctttatgacacagttaggagctgtcggaataaccaagggcag
ctcatagccgaaccttttttccatttgccttcaaagaaaaaatacccagattattatcag
caaattaaaatgcctatatcgcttcaacagatcagaacaaaactaaagaaccaagaatat
gaaactttagatcatttggagtgtgatctgaatttaatgtttgaaaatgccaaacgctat
aatgttcccaattcaaccatctataagcgagttctgaaattgcagcaagtcatgcaggca
aagaagaaagagcttgccaggagagatgacattgaggatggagacagcatgatctcttcc
gctacttctgatactggtagtgccaaaagaaaaaggaatactcatgacagtgagatgttg
ggtctcaggaggctatccagtaaaaagaacataagaaaacagcgaatgaaaattttattc
aatgttgttcttgaagctcgagagccaggttcaggcagaagactttgtgatctatttatg
gttaagccatccaagaaggactatcctgattactataaaatcatcttagagccaatggac
ctgaaaataattgagcataacatccgaaatgacaaatatgcaggtgaagaaggaatgatg
gaagacatgaaactcatgttccgaaatgccaggcactacaatgaggagggctcccaggta
tacaatgatgctcatatcctggagaagttactcaaagataaaaggaaagagctgggacca
ctacctgatgatgatgacatggcttctcccaagcttaagcagagtagaaagagtggtgtt
tctcctaagaaatcaaagtacatgactccaatgcagcagaagctaaatgaagtgtatgaa
gctgtaaagaactatactgataagaggggtcgccgtctcagtgctatatttctaagactc
ccctctagatcagagctgcctgactactatctgaccattaaaaaacccatggacatggaa
aaaattcgaagtcacatgatggcaaacaaataccaagatatagattctatggtagaggac
tttgtcatgatgtttaataatgcctgtacctacaatgaaccagagtctttaatctacaaa
gatgctcttgtcctacataaagtcctccttgaaacccggagagacctggagggagatgag
gattctcatgtcccaaatgtgaccttgctgattcaagaacttatccataatctttttgtg
tcagtcatgagtcatcaggatgatgagggaagatgttacagtgactccttagcagaaatt
cctgctgtggatccgaactttcccaacaaacctccccttacatttgacattattaggaag
aatgttgaaagtaatcgctatcggcgacttgatttatttcaggagcatatgtttgaagta
ttggaaagagcaagaaggatgaataggacagattccgaaatatatgaagatgcagtagaa
cttcagcagttttttattagaattcgtgatgaactctgcaaaaatggagagatccttctt
tctccagcactcagctataccacaaaacatttacataacgatgttgaaaaagaaaaaaag
gaaaaattacctaaagaaatagaggaagataaactaaaacgagaagaagaaaaaagagaa
gctgaaaaaagtgaagattcctcaggtactgcaggcctctcaggcttacatcgtacctac
agccaagactgcagctttaagaatagcatgtatcatgttggagattatgtctatgttgaa
cctgcagaggccaatctacaaccacatatagtctgtattgagagactgtgggaggattcg
gctggtgaaaaatggttgtatggctgttggttttatcggccaaatgaaacattccatttg
gctacacgaaaatttctggaaaaagaagtttttaagagtgactattacaataaagttcct
gttagtaaaattctaggcaaatgtgtagtcatgtttgtcaaggaatactttaaattatgc
ccagaaaactttcgagatgaggatgtttttgtctgtgaatcaagatactctgctaaaacc
aagtctttcaagaaaattaaactgtggacaatgcccatcagctcagttagatttgtccct
cgggatgtacccttgcctgtggttcgagtggcctcagtatttgcaaatgcagataaaggg
gatgatgagaagaatacagacaactcagaggacaatcgagctgaagacaattttaatttg
gaaaaggaaaaagaagatgttcctgtagagatgtccaatggtgaaccaggttgccactac
tttgagcagcttcattacaatgacatgtggctgaaggttggcgactgtgtcttcatcaaa
tcccatggcttggtgcgccctcgtgtgggcagaattgaaaaagtatgggttcgagatgga
gctgcatatttttatggccccattttcattcacccagaagaaacggaacatgagcccaca
aaaatgttctacaaaaaagaagtatttctgagtaatctggaggaaacctgccccatgagt
tgtattctgggaaaatgtgctgtgttgtcattcaaggacttcctctcctgcaggccaact
gaaataccagaaaatgacattctgctttgtgagagccgctataatgagagtgacaagcag
atgaagaaattcaaggggttgaagaggttttcactctctgctaaagttgtagatgatgaa
atttactacttcagaaaaccaatcattcctcagaaagaaccctcacctttgttggaaaag
aagatacaattgctagaagctaagtttgctgagttagaaggtggagatgatgatattgaa
gagatgggagaagaggatagtgaggtcattgaacctccatctctacctcagcttcagact
cccctggccagtgagctggacctcatgccctacacaccccctcagtctaccccaaagtct
gccaaaggcagtgcaaagaaggaaggttctaaacggaaaatcaacatgagtggctacatt
ctattcagcagtgaaatgagagctgtgattaaagcccagcacccagactactcttttggg
gagctcagcagactggtggggacagaatggagaaaccttgagacagccaagaaagcagaa
tatgaagagcgggcagctaaagttgctgagcagcaggagagagagcgagcagcacagcaa
cagcaaccgagtgcttctccccgagcaggcacccctgtgggggctctcatgggggtggtg
ccaccaccaacaccaatggggatgctcaatcagcagttgacacctgttgcaggcatgatg
ggtggctatccgccaggccttccacctttgcagggcccagttgatggccttgttagcatg
ggcagcatgcagccacttcaccctggggggcctccacctcaccatcttccgccaggtgtg
cctggcctcccaggcatcccaccacccggtgttatgaaccaaggagtagcccccatggta
gggactccagcaccaggtggaagtccatatgggcaacaggtaggagttttggggcctcca
gggcagcaggcaccacctccatatcctggtcctcatccagctggcccccctgtcattcag
cagccaacaacacccatgtttgtggctcccccaccaaagacccaaaggcttctccactca
gaggcctacctgaaatatattgaaggactcagtgctgaatccaacagcattagcaagtgg
gaccaaactctggcagctcgaagacgggatgtccatttgtcaaaagaacaggagagccgc
ctaccttctcactggctcaaaagtaaaggggcacacaccaccatggcagatgccctctgg
cgccttcgggatttaatgcttcgagacactcttaacattcgacaagcatacaacctagaa
aatgtttaa

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