Cricetulus griseus (Chinese hamster): 100763233
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Entry
100763233 CDS
T02813
Symbol
Ctcf
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
cge
Cricetulus griseus (Chinese hamster)
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cge03000
]
100763233 (Ctcf)
03036 Chromosome and associated proteins [BR:
cge03036
]
100763233 (Ctcf)
Transcription factors [BR:
cge03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100763233 (Ctcf)
Chromosome and associated proteins [BR:
cge03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100763233 (Ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
100763233
NCBI-ProteinID:
XP_027261640
UniProt:
G3HZM6
LinkDB
All DBs
Position
3:181922935..181964412
Genome browser
AA seq
734 aa
AA seq
DB search
MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDACHLPQNQTDGGEVVQDVNSSVQM
VMMEQLDPTLLQMKTEVMEGTVAPEAEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELPPQEDPSWQKDPDYQPPAKKSKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETKKSKRGRKR
KMRSKKEDSSDSEENAEPDLDDNEEEEEPAVEIEPEPEPQPQPQPQPVAPAPPPAKKRRG
RPPGRTNQPKQNQPTAIIQVEDQNTGAIENIIVEVKKEPDAEPVEGDEEEAQAATTDAPN
GDLTPEMILSMMDR
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaggcagttgaagccattgtggaggagtctgaaactttcattaaaggaaag
gagagaaagacttaccagagacgtcgggaagggggccaggaagaagacgcttgccacttg
ccccagaaccagacagatgggggtgaggtggtccaggatgtcaacagcagtgtacagatg
gtaatgatggaacagctggatccaacccttcttcaaatgaagactgaagtaatggagggt
acagtggctcctgaagcagaggctgcagtggacgatacccagatcataaccttgcaggtt
gtaaatatggaggaacagcccattaacataggagagcttcagcttgttcaagtacctgtt
cctgtgactgtacctgttgctactacttcagtagaagaacttcagggggcttatgagaat
gaagtatctaaagagggccttgcagaaagtgaaccgatgatatgtcacaccttacctttg
cctgaagggtttcaggtggtgaaagtgggggccaatggagaagtggagacactagagcag
ggggagcttcctcctcaggaagacccaagctggcaaaaagacccagactatcagccacca
gccaaaaaatcaaagaaaacaaaaaagagcaaactacgttacacggaggagggcaaagat
gtggatgtgtctgtctatgattttgaagaagaacagcaggaaggtctgctgtctgaggtt
aatgctgagaaagtggttggtaacatgaagcctccaaagccaacaaaaattaaaaaaaaa
ggtgtaaagaagacattccagtgtgagctttgcagttacacgtgtccgaggcgttcaaat
ttggatcgtcacatgaaaagccacactgatgagagaccacataagtgccatctctgtggc
agagcattcagaacagtaaccctcctgaggaatcaccttaatacacatacaggtactcgt
cctcacaagtgcccagactgcgacatggcctttgtgaccagtggagaattggtgcggcat
cgtcgttataaacacacccacgagaagccatttaagtgttccatgtgtgactatgccagt
gtagaagtcagcaaattaaaacgacacatccgctctcatactggagagcgcccgttccag
tgcagtttgtgcagttatgccagcagggacacatacaagctgaaaaggcacatgagaacc
cattcaggggaaaaaccatatgaatgttatatttgtcatgctcggtttacccagagtggt
accatgaagatgcacattttacagaagcacacagaaaatgtggccaaatttcattgtccc
cactgtgacactgtcatagcccgaaaaagtgatttgggtgtccacttgcgaaagcagcat
tcctatattgagcagggcaaaaaatgtcgctactgtgatgctgtgtttcatgagcgctat
gctctcatccagcatcaaaaatcacataaaaacgagaagcgcttcaagtgtgaccagtgt
gattatgcttgtagacaggagaggcacatgatcatgcacaagcgcactcacacgggcgag
aagccttatgcctgcagtcactgcgacaagaccttccgccagaaacagctccttgacatg
cacttcaagcgttatcacgaccccaactttgtccctgcagcctttgtctgttccaagtgt
gggaaaacattcactcgccggaatacaatggcaagacatgctgataattgtgctggtcca
gatggtgtggaaggggaaaatggaggagagactaaaaagagcaaacgaggaagaaaaaga
aagatgcgttctaaaaaagaagactcctctgacagtgaagaaaacgctgagccagatctg
gatgacaatgaggaggaggaggagcctgctgtagaaattgaacctgagccagagcctcag
cctcagcctcagcctcagcctgtggccccagccccaccacctgccaagaagaggagagga
cgacctcctggaagaaccaaccagcccaaacagaaccagccaacagccatcattcaggtt
gaagaccagaatacaggtgcaattgagaacattatagttgaagtcaaaaaagagccagat
gctgagcctgtggaaggggacgaagaggaggctcaagcagccaccacagatgcccccaat
ggagacctcacgcctgagatgatcctcagcatgatggaccggtga
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