Cricetulus griseus (Chinese hamster): 100763282
Help
Entry
100763282 CDS
T02813
Symbol
Ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X3
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100763282 (Ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cge03041
]
100763282 (Ddx46)
Enzymes [BR:
cge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100763282 (Ddx46)
Spliceosome [BR:
cge03041
]
Complex A
U2 snRNP components
U2 related factors
100763282 (Ddx46)
Complex B
100763282 (Ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
FAM176
Motif
Other DBs
NCBI-GeneID:
100763282
NCBI-ProteinID:
XP_027265566
UniProt:
A0A9J7JMF4
LinkDB
All DBs
Position
3:274614938..274660317
Genome browser
AA seq
1032 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGSKSKKAENRSRS
KEKAEGGDSSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGSEMEGEELDPLDAYMEEVKEEVK
KFNMRSVKGGAGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI
TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI
EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS
IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY
TFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF
DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA
PTAGNAEKLEIAKRLALRINAQKNLGIESQVDVMQQATNAILRGGTILAPTVSAKTIAEQ
LAEKINAKLNYVPLEKQEEERQEGGQSESFKRYEEELEINDFPQTARWKVTSKEALQRIS
EYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNS
YQPTNKGRYKVL
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggagtctcgccattaccgaaaacggtcagcatcacgaggacgttctggaagt
cggtctaggagtcgttcaccctctgacaaaagaagtaaacgtggagatgacagacgttct
aggagtagagatagagacagaaggagagagaggtctcggagtagggacaaaagaagatcg
aggtcaagggacaggaagcggctgaggcgttccagaagtagagagcgagacagaagccga
gagagaagaagatctcggagccgagataggaggcgatcaaggagcagaagtcggggtcgt
cgatcccggtcctccagtcctggcagcaaaagcaagaaggctgagaacaggtctaggtcc
aaagagaaagcagaaggtggggacagttctaaagagaagaaaaaggacaaagatgacaag
gaagatgagaaagagaaggatgctgggaactttgaccagaataagctggaggaagaaatg
agaaaacgaaaagaaagagttgaaaaatggcgagaagaacagcgtaaaaaggccatggaa
aacataggggaattgaaaaaggaaattgaagaaatgaaacaagggaaaaaatggagtttg
gaagatgatgatgatgatgaagatgaccctgcagaagccgagaaggagggcagtgagatg
gagggcgaggagttagaccccctggacgcctacatggaggaagtgaaggaggaggtgaag
aagttcaacatgaggagcgtcaaaggcggcgccggcaatgagaagaagtctgggccaaca
gtcaccaaagttgttactgtggtaacaaccaagaaagcagtcgtagattctgataagaag
aagggggagctgatggagaatgaccaggatgccatggagtattcttcagaggaggaggaa
gttgatcttcagacggccctcacaggctaccagacgaaacagagaaaacttctagaacca
gttgaccatggaaaaattgaatatgaaccattcaggaaaaatttttacgttgaagttcca
gaactagcaaaaatgtctcaggaggaggtgaacgtgtttcgattggaaatggagggcatt
acagttaaaggaaaaggttgtcccaaacccattaaatcatgggtccagtgtggaatttcc
atgaagatattaaactccctcaagaagcatggctatgaaaagcccacaccaatccaaact
caagcaattcctgctataatgtctggacgggatttgattggcattgccaagacaggaagt
ggaaaaaccattgcctttcttttgcccatgtttagacatatcatggatcagagatcatta
gaagaaggagaggggccaatagctgtcatcatgactccaacccgagaactggctttacag
atcactaaagaatgtaagaagttttcgaagaccttgggactcagagtggtctgtgtgtat
ggagggacaggaatcagcgagcagatcgctgagctgaaaagaggtgctgagattattgtt
tgcacacctggtcgaatgattgacatgttagcggctaacagtggtcgggtcacaaatctt
cgaagagtgacgtatgttgttttagatgaagcagacagaatgtttgacatgggttttgaa
ccacaggtcatgcgcattgtggataatgtccgtcctgaccgacagacagttatgttttca
gctactttccctagagctatggaggctttggcccgcaggatcctgagcaagcccattgaa
gttcaggttggaggcaggagtgtggtttgctcagatgtggaacaacaagtgattgtgatt
gaagaagaaaagaaattcttgaaattgctcgagcttttaggccattatcaggagtcagga
tctgtcattatatttgtggataagcaggagcatgctgacggtcttctgaaggacttgatg
agggcctcttacccttgcatgtctcttcatggaggtattgatcaatatgacagagacagc
atcataaatgactttaagaatggaacctgcaaacttctcgtggccacgtctgttgctgct
cgaggtctagacgtgaaacatctaattcttgtagtaaattacagctgccccaaccattat
gaagattatgtgcacagagctggacgaactggaagagcaggcaacaagggttatgcctac
actttcatcacagaagatcaagctcgctatgctggtgacatcattaaagcgcttgaattg
tcaggcacggcagtgcctcctgatctggaaaaactctggagtgacttcaaagaccagcag
aaggcggaagggaaaataattaaaaagagcagtggtttctctggcaagggattcaagttt
gatgaaacagaacaggctttggccaacgagaggaagaagttacagaaagctgctcttggc
ctgcaggactctgatgatgaggatgctgctgtcgatattgatgaacagattgagagcatg
tttaattcaaagaagagagtaaaagacatggctgcaccgggcacatctagtgtgcctgcc
ccgactgcaggcaatgccgagaagctagagatcgccaagaggctggcgcttcgaatcaat
gctcagaagaacctgggcatcgagtctcaggtagatgtgatgcagcaagccaccaacgcc
atcctcagagggggcaccattctggctcccacggtgtctgcgaaaaccatcgcagaacag
cttgctgaaaagatcaatgccaagctcaattatgtgcctttggagaagcaggaagaggag
agacaggagggtgggcagagtgaatctttcaagagatatgaggaagaactagaaattaat
gacttcccacagacggcaaggtggaaagtcacctctaaggaagccctgcagagaatcagc
gaatactctgaagccgcgatcacaatcagaggaacctacttccctcctggcaaagagccc
aaagaaggggagcggaagatttacttggcgattgaaagtgccaacgaactggctgtgcag
aaagccaaggcagaaatcaccaggctcataaaagaagaactgatccgactgcaaaattca
taccaaccaacaaataaaggacgatacaaagtattataa
DBGET
integrated database retrieval system
