Cricetulus griseus (Chinese hamster): 100763393
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Entry
100763393 CDS
T02813
Name
(RefSeq) polyadenylate-binding protein 1-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03015
mRNA surveillance pathway
cge03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100763393
09123 Folding, sorting and degradation
03018 RNA degradation
100763393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cge03019
]
100763393
03041 Spliceosome [BR:
cge03041
]
100763393
Messenger RNA biogenesis [BR:
cge03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100763393
mRNA cycle factors
Stress granule specific factors
100763393
Spliceosome [BR:
cge03041
]
Complex C
Other components
Complex C specific factors
100763393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RBD_DEAH11
RBD_RDR6
RRM_occluded
RRM_3
HATPase_c
YflT
Motif
Other DBs
NCBI-GeneID:
100763393
NCBI-ProteinID:
XP_035294939
UniProt:
A0A9J7K3X8
LinkDB
All DBs
Position
2:complement(197847182..197849074)
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AA seq
630 aa
AA seq
DB search
MNPSAPGCPMASLYVGDLHPDVTEAMLYEKFSTAGPILSIRVYRDVITRRSLGYASVNFE
QPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRRSGVGNVFIKNLNKTIDNKALYDTFS
AFGNILSCKVVCDENGSKGHGFVHFETEEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE
TELGVRAKEFTNVYIKNFGDSMDDETLNDLFGRFGQVLSVKVMTDEGGKSKGFGFVSFER
HEDAQKAVDEMNGKELNGKHIYVGRAQKKVDRHTELKRKFEQVTQDRSIRYQGINLYVKN
LDDGIDEERLQKEFSPFGTITSTKVMMEGGRSKGFGFVCFSSPEEATKAVSEMNGRIVAT
KPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVMNPYQHAPSGYSVATVPQTQNCVP
CCSSQMTQPRPSARWTAQGARPHPFPNVPGAIHPAAPRSSFSSVRPGPSHVPQVVPAHRI
PNTSAQTGAHRPVAAASAPATPVRSVPQYKYTTGVRNPQQHLNAQLGQEPAVRVQGQEPW
TASMLVTAPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNLEPLSMLESPEFLRSK
ADEAVALLQAHQAKEVVQKALSSNSGVPTI
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccagcgccccaggctgccccatggcctcgctctatgtgggggacctgcacccc
gacgtgacggaggcgatgctctacgagaagttcagcacggccggacccatcctttccatc
cgggtgtacagggacgtgatcacccgccgctccctgggctatgcttctgtgaacttcgag
cagcccgcagacgcagagcgcgctttggacaccatgaattttgatgtcatcaagggcaag
ccggtccgcatcatgtggtctcagcgtgatccgtcactacgcagaagtggagtaggcaat
gtgttcattaaaaatttgaacaaaaccattgataataaagcgctgtatgatactttttct
gctttcggcaacatcctttcctgcaaggtagtttgcgatgagaacggctccaagggccac
ggattcgtacattttgaaacagaggaggcagcagaaagagccattgagaaaatgaacggg
atgcttctgaatgatcgcaaagtgtttgttggacggtttaaatctcgaaaagaacgagaa
acagagcttggagtgagggccaaggagttcaccaacgtttacatcaagaactttggggac
agcatggatgatgagaccctgaatgacctcttcggcaggtttggacaggtcttaagtgtg
aaagtcatgaccgatgaaggtggaaaatccaaaggattcgggtttgtcagctttgaaagg
cacgaagatgcacagaaagcggtggatgagatgaatggaaaggagctcaatggaaaacac
atctatgttggtcgagctcagaaaaaagtggaccgacacacagaactcaagcgcaaattt
gaacaggtgacacaagacaggagcatcagataccaaggtattaacctttacgtgaaaaat
cttgacgatggtattgatgaggagcgtctgcagaaagaattttctccgtttggaaccatc
accagtacaaaggttatgatggagggtggtcgcagtaaagggttcggttttgtgtgtttc
tcctcccccgaagaagccaccaaagcagtttcagaaatgaatggtagaattgtggccacg
aagccactgtatgtagctttagcccaacgcaaagaagagcgacaagctcacctcactaac
cagtatatgcagagaatggcaagtgtacgagctgtgcccaaccctgtgatgaacccctac
caacacgcaccttcaggttactccgtggctactgtcccgcagacacagaactgtgttcca
tgctgctctagccagatgactcagccgaggccaagtgctcgctggactgctcagggtgcc
aggcctcatccatttccaaatgtgcctggtgctatccacccagctgctcctagatcatca
tttagtagtgtaagaccaggtccttcacatgttcctcaagtcgtaccagcacaccgcatt
cctaacacatcagcacagacaggggctcaccgtcctgtggcagcagcttcagcaccagct
acacctgttcgctcggttccacagtataaatataccaccggagtgcggaacccccagcaa
catcttaatgcacagctggggcaagagcctgctgttcgggtgcagggtcaggaaccttgg
actgcttccatgttggtaactgctcctcaagaacaaaagcaaatgttgggcgaaaggctg
tttcctctcattcaagccatgcacccgactcttgctggtaagatcacgggcatgttgctg
gagatcgataacttagaaccacttagtatgcttgagtctccggagtttctacgctctaag
gctgatgaagctgtggccttgctccaagcccaccaagctaaggaggttgtccagaaagcc
cttagcagtaactctggtgtcccaactatttaa
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