Cricetulus griseus (Chinese hamster): 100763926
Help
Entry
100763926 CDS
T02813
Symbol
Ptch1
Name
(RefSeq) protein patched homolog 1 isoform X3
KO
K06225
patched 1
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge04024
cAMP signaling pathway
cge04340
Hedgehog signaling pathway
cge04360
Axon guidance
cge05200
Pathways in cancer
cge05205
Proteoglycans in cancer
cge05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100763926 (Ptch1)
04024 cAMP signaling pathway
100763926 (Ptch1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100763926 (Ptch1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100763926 (Ptch1)
05205 Proteoglycans in cancer
100763926 (Ptch1)
09162 Cancer: specific types
05217 Basal cell carcinoma
100763926 (Ptch1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
MENTAL
Motif
Other DBs
NCBI-GeneID:
100763926
NCBI-ProteinID:
XP_027265457
UniProt:
A0A9J7JIV1
LinkDB
All DBs
Position
3:complement(281084735..281143377)
Genome browser
AA seq
1434 aa
AA seq
DB search
MASAGNAAGALGRQAGGGRRRRTGGPHRAAPDRDYLHRPSYCDAAFALEQISKGKATGRK
APLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLKAANLETNVEELWVEVGG
RVSRELNYTRQKIGEEAMFNPQLMIQTPKEEGANVLTTEALLQHLDSALQASRVHVYMYN
RQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPL
RWTNFDPLEFLEELKKINYQVDSWEEMLHKAEVGHGYMDRPCLNPADPDCPATAPNKNST
KPLDVALVLNGGCQGLSRKYMHWQEELIVGGTVKNATGKLVSARALQTMFQLMTPKQMYE
HFRGYEYVSHINWNEDRAAAILEAWQRTYVEVVHQSVAPNSTQKVLSFTTTTLDDILKSF
SDVSVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGIS
FNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSIS
NVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCCF
TSPCVSRVIQVEPQAYTEPHSNTRYSPPPPYSSHSFAHETHITMQSTVQLRTEYDPHTHV
YYTTAEPRSEISVQPVTVTQDTLSCQSPESTSSTRDLLSQFSDSSLHCLEPPCTKWTLSS
FAEKHYAPFLLKPKAKVVVILLFLGLLGVSLYGTTRVRDGLDLTDIVPRETREYDFIAAQ
FKYFSFYNMYIVTQKADYPNIQHLLYDLHKSFSNVKYVMLEENKQLPQMWLHYFRDWLQG
LQDAFDSDWETGRIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQLTKQRLVDADGII
NPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRIPAAEPIEYAQF
PFYLNGLRDTSDFVEAIEKVRVICNNYTSLGLSSYPNGYPFLFWEQYISLRHWLLLAISV
VLACTFLVCAVFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPVVILIASVGIGV
EFTVHVALAFLTAIGDKNHRAMLALEHMFAPVLDGAVSTLLGVLMLAGSEFDFIVRYFFA
VLAILTVLGVLNGLVLLPVLLSFFGPCPEVSPANGLNRLPTPSPEPPPSVVRFAVPPGHM
NNGSDSSDSEYSSQTTVSGISEELRHYEAQQGSGGPGHQVIVEATENPVFARSTVVHPES
RHHPPLNPRQQPHLDSGSLSPGRQGQQPRRDPPREGLRPPPYRPRRDAFEISTEGHSGPS
NRDRSGPRGARSYNPRNPTSTAMGSSVPSYGQPITTVTASASVTVAVHPPPGPGRNPRGG
PCPGYESYPETDHGVFQDPHVPFHVRCERRDSKVEVIELQDVGCEERPWGSSSD
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggctggtaacgccgccggggccctgggcaggcaggccggcggcgggaggcgc
agacggaccgggggaccgcatcgcgccgcgccggaccgggactatctgcaccggcccagc
tactgcgacgccgccttcgctctggagcagatttccaaggggaaggctaccggccggaaa
gcaccgctgtggctgagagcgaagtttcagagactcttatttaaactgggttgttacatt
caaaaaaactgcggcaagtttttggttgtgggtctcctcatatttggggccttcgctgtg
ggattaaaggcagctaatctcgagaccaacgtggaggagctgtgggtggaagttggtgga
cgagtgagtcgagaattaaattatacccggcagaagataggagaagaggctatgtttaat
cctcaactcatgatacagactccaaaagaagaaggcgctaacgtcctgaccacagaggcc
ctcctacaacacctggactcagcactccaggccagccgcgtgcacgtctacatgtataac
aggcaatggaagttggaacatttgtgctacaaatcaggggaacttatcacagagacaggt
tacatggatcagataatagaatacctttacccttgcttaatcattacacctttggactgc
ttctgggaaggggcgaagttgcagtcggggacagcgtacctcctaggtaagcctcctttg
cggtggacaaactttgaccccttggaattcctcgaagagttaaagaaaataaactaccaa
gtggacagctgggaggagatgctgcataaagctgaagtcggccatggatacatggaccgg
ccctgcctcaacccagccgacccagattgccccgccacagcccccaacaaaaattcaacc
aaacctcttgatgtggcccttgttttgaatggtggatgtcaaggtttatccaggaagtat
atgcattggcaggaggagttgattgtgggtggcacagtcaagaatgccactggaaaactg
gtcagtgctcgcgctctgcagaccatgttccagttaatgactcccaagcaaatgtacgag
cacttcagaggctatgagtacgtctctcatatcaactggaatgaggatagggcagcagcc
atcctggaggcttggcagaggacatatgtggaggtcgttcatcaaagcgttgccccgaac
tccacccagaaggtgctttccttcaccaccaccaccctggacgacatcctaaaatccttc
tccgatgtcagtgtcatccgagtggcaagtggctacctactgatgcttgcctatgcctgt
ttaaccatgctgcgctgggactgctccaagtcccagggtgccgtggggctggctggtgtc
ctgttggttgcactgtcagtggctgcaggattaggcctctgctccttgatcgggatttcc
tttaatgctgcgacaactcaggttttgccatttcttgctcttggtgttggtgtggatgac
gtcttcctcctggcacatgcattcagtgaaacaggacaaaataaaaggattccatttgag
gacaggaccggggagtgcctcaagcgcacaggagccagcgtggccctcacctccatcagc
aatgttactgccttcttcatggccgcattaatcccgatacctgcacttcgagcattctcc
ctccaggctgcggtagtagtggtgttcaattttgcgatggtgctgctcatttttcctgcg
attctcagtatggatttatatagacgagaagacagaagattggatattttctgctgtttc
acaagtccctgtgtcagcagggtgattcaggttgaaccacaggcctacacagagcctcac
agtaacacccgttacagccctccacccccctacagcagccatagcttcgcccatgaaaca
cacatcaccatgcagtccactgttcagctccgcacagagtacgaccctcatacgcatgtg
tactacaccaccgccgagccaagatccgagatctctgtacagccagtcaccgtcacccag
gacaccctcagctgtcagagccctgagagcaccagctccaccagggacctgctttcccag
ttctcagactccagccttcactgtctcgagcccccctgcaccaagtggacactctcttcg
tttgcagagaagcactatgctcccttcctcttgaaacccaaagccaaggttgtagtaatc
ctccttttcctgggcttgctgggggtcagcctttatgggaccacacgtgtcagagacggg
ctagacctcacggacattgttccccgggaaaccagagaatatgacttcattgctgcacag
ttcaagtacttttctttctacaacatgtatatagtcacccagaaagcagactacccaaat
atccagcacctgctttatgaccttcataagagtttcagtaatgtgaagtatgtcatgctg
gaagagaacaagcaacttccccagatgtggctgcactacttcagagactggctccaagga
cttcaagatgcatttgacagtgactgggaaactgggaggatcatgccaaacaattacaaa
aatggatcggacgatggggtcctcgcctacaaactcctggtgcagactggcagcagagac
aagcccatcgatatcagtcagttgactaaacagcggctggtggatgcagatggcatcatt
aaccccagcgctttctacatctacctgacggcttgggtcagcaacgaccctgtagcttac
gctgcctcccaggccaacatccggcctcaccgaccagaatgggtccacgacaaagccgac
tacatgccagagaccaggctgagaatcccagcagcggagcccattgagtatgctcagttc
cctttctacctcaacggcctgcgagacacctcggactttgtggaagccattgaaaaagtg
agagtcatctgtaacaactacacgagcttagggctgtccagctatcccaacggctacccc
ttcctcttctgggagcagtacatcagcctgcgacactggctgctgctagccatcagtgtg
gtgctggcctgcacgtttctagtgtgtgcggtcttcctgctgaacccctggacggctggg
atcattgtcatggtcctggctttgatgacagttgagctcttcggcatgatgggcctcatt
ggaatcaagctgagtgctgtgcctgtggtcatcctgattgcttctgtcggcattggagtg
gagttcaccgtccacgtggctttggcctttctgacagccattggtgacaagaaccacagg
gctatgcttgccctggagcacatgttcgctcctgttctggacggtgctgtgtccactctg
ctgggcgtactgatgcttgcagggtccgaatttgatttcattgtcagatacttctttgct
gtcctggcgatcctcaccgtcttgggggttctcaacggactcgttttgctgcctgttctc
ctgtccttctttgggccgtgtcctgaggtgtctccagccaatggcctgaaccggctgccc
actccttcgcctgagccacccccaagtgtcgtccgatttgcagtgcctcctggtcacatg
aacaatgggtctgattcctctgactcggagtacagctctcagaccacagtgtcgggcatc
agcgaggagctcaggcactatgaggcccagcagggttctggaggtcctggccaccaagtg
atcgtggaagccacagaaaaccctgtctttgcccggtccactgtggtccatcctgaatca
agacatcaccctcccttgaatcctcggcagcagccccacctggactctggctccctgtct
cctggacgacaaggccagcagcctcgaagggatccccccagagaaggcttgcggccaccc
ccatatagaccgcgaagagacgcttttgaaatttctactgaagggcattctggccctagc
aatagggaccgctcaggcccccgcggggcccgttcttacaaccctcggaacccaacgtcc
actgccatgggcagctctgtgcccagctacggccagcccatcaccactgtgacagcttcc
gcctccgtgactgtcgctgtgcaccccccacctggacctgggcgcaacccccgagggggg
ccctgtccgggctatgagagctaccctgagactgaccatggggtgttccaggacccccat
gtgcctttccatgtcaggtgcgagaggagagactccaaggtggaagtcatagagcttcag
gacgtggggtgtgaggagaggccttgggggagcagctctgactga
DBGET
integrated database retrieval system
