Cricetulus griseus (Chinese hamster): 100765011
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Entry
100765011 CDS
T02813
Symbol
Lig3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100765011 (Lig3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cge03400
]
100765011 (Lig3)
Enzymes [BR:
cge01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
100765011 (Lig3)
DNA repair and recombination proteins [BR:
cge03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
100765011 (Lig3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
100765011
NCBI-ProteinID:
XP_027282284
UniProt:
G3GTU1
LinkDB
All DBs
Position
7:96189698..96215443
Genome browser
AA seq
1014 aa
AA seq
DB search
MTLAFKILFPRNLCALGRKELCLFSEQNHWPVIRQFSQWSETDLLRGCCLLQRRKPVLSF
QGGHLRPRATHLVFFPGSHVGLYTGPYEMAEQRFCVDYAKRGTAGCKKCKEKILKGVCRI
GKVVPNPFSESAGDMKEWYHVKCIFEKLERARATTKKIEDLTELEGWEELEDDEKEQISQ
HIADLSSKAAGTPKKKTAVQAKVTTTGQVSSPVKGASFVTSTNPRKFSGFSAAKTNNSEQ
GSLSSAPKTSLSTSKCDPKHKDCLLREFRKLCAMVAENPSYNTKTQIIQDFLQKGSAGDG
FHGDVYLTVKLLLPGVVKSVYNLNDKQIVKLFSRIFKCNPDDMARDLEQGDVSETIRVFF
EQSKSFPPAAKSLLTIQEVDAFLLHLSKLTKEDEQQQALQDIASRCTANDLKCIIRLIKH
DLKMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLHNEQEVKYQGQRRTLSVQASLMT
PVQPMLAEACKSIEYAMKKYPNGMFSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPHKVA
HFKDYIPKAFPGGQSMILDSEVLLIDNNTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIY
FNDVSLMDRPLCERRKLLHDNMVEIQNRIMFSEMKQVTKASDLADMINRVIREGLEGLVL
KDVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPD
SQKWCTVTKCAGGHDDATLARLQKELDMVKISKDPSKIPSWLKINKIYYPDFIVSDPKKA
AVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKEKADFD
VVAGDEGNSSTGGSNGENEGTAGSAAPHKAPKAPPSKSSASDKKAKQKLNNPNSRDGNKV
IPKPSPMKPGDKLAMKSSPVKVGVKRKAADETQCPTKVLLDVFTGVRLYLPPSTPDFKQL
KRYFVAFDGDLVQEFDMASATHVLGNRDDNTEAQLVSPEWIWACIRKRRLIAPC
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgactttggctttcaagatcctcttcccgagaaacctttgtgcccttggcagaaaagaa
ctgtgcctgttctcagaacagaatcactggcctgtcataagacagttcagccagtggtcg
gaaacagatctccttcgtgggtgctgcctcctccagagaagaaagcctgtcctatctttc
cagggaggtcatctaagaccacgtgccacccaccttgttttcttcccagggtcgcatgtg
ggactctatactggcccctatgagatggcggagcagcggttctgtgtggactatgccaag
aggggcacagctggttgcaagaaatgcaaggagaagattttaaagggcgtatgccgcatt
ggcaaagtggtgcccaatcccttctcagagtctgcgggcgatatgaaagagtggtaccat
gttaagtgcatatttgagaaactggagcgggctcgggctaccacaaaaaaaattgaagac
ctcacagagctagaaggctgggaagagctggaagatgacgaaaaggaacagatcagccag
cacattgcagacctgtcctctaaggcagctgggacacctaagaagaaaaccgctgtccag
gctaaggtgacaaccactggccaggtgtcatccccagtgaaaggtgcttcgtttgtcacc
agtaccaatcctcggaaattttctggattttcagcagccaaaaccaacaactctgagcaa
ggctccttaagctctgcccctaagacaagtctgtctacaagtaaatgtgaccctaagcac
aaagactgtctactacgagagttccggaagctgtgcgccatggtggctgaaaatcctagc
tacaatacaaagacccagatcatccaggacttcttgcagaaaggctctgcaggagatggc
ttccacggtgatgtgtacctaacagtgaagctactgctgccgggagtcgttaagagtgtt
tacaacttgaacgataagcagattgtgaaactttttagccgaatttttaagtgcaaccca
gatgatatggcccgggacctagaacagggtgacgtatcagagacgatcagagtcttcttt
gagcagagcaagtctttccccccagctgccaagagcctcctcaccatccaggaagtggat
gccttcctcctgcacctctccaagctcaccaaagaggatgagcagcagcaggccctgcag
gacattgcctccaggtgtacagccaatgaccttaagtgcatcatccggctgatcaagcat
gatctgaagatgaactcgggtgcaaagcatgtgttagatgcccttgaccccaatgcttat
gaagccttcaaagcctcgcgaaacctgcaggatgtggtggagcgagtccttcacaatgag
caggaggtgaagtaccaaggccagcgacggactctgagcgttcaggcctcactgatgact
cctgtgcagcccatgctggctgaggcctgcaagtccatcgagtatgcaatgaagaagtat
cccaatggcatgttctctgagatcaagtacgatggtgagcgagtccaggtgcataagaag
ggggaccacttcagctacttcagccgcagtctcaagcctgtcctgcctcacaaggtggcc
cactttaaggactacatccccaaagcctttcctgggggtcagagcatgatcttggactcc
gaagtgctcctgattgacaacaacactggcaaaccactgccctttgggactctgggagtg
cacaagaaagctgccttccaggatgctaatgtttgcctgtttgtttttgattgtatctac
tttaatgatgtcagcttgatggacaggcctctctgtgagagaaggaagcttcttcacgac
aacatggttgaaatccagaaccggatcatgttctcagaaatgaagcaagtcacaaaagcc
tccgacctggctgacatgataaaccgggtgatccgagagggcttagaagggctggtgcta
aaggatgtaaagggtacatacgagcctgggaagcgacactggctgaaagttaagaaagat
tatttgaacgagggggccatggcagatacagctgatctggtggttcttggggccttctat
gggcaagggagcaaaggtggtatgatgtccatcttcctcatgggctgctatgaccctgac
agccagaagtggtgcactgtcaccaaatgtgctggaggccacgatgatgccacacttgcc
cgactgcagaaggagctagatatggtgaagatcagcaaggatcccagcaagatacctagc
tggctgaagatcaacaagatctactatcctgacttcattgtttcagacccaaagaaagct
gctgtgtgggagatcacaggggcagaattttccaaatctgaggctcacactgctgatggg
atctccatccgatttcctcgatgcactcgaatccgggacgacaaggactggaaatctgcc
actaacctcccccaactcaaggaactataccagctgtccaaagaaaaggcagacttcgat
gtagtggctggagatgaggggaattccagtaccggaggtagcaatggtgagaatgagggc
actgctgggtctgctgcaccccacaaggcccccaaggcacctcctagtaagtcctctgcc
agtgacaagaaggccaaacagaagctgaataaccccaacagcagagatggcaacaaggtg
attccaaagccttcccccatgaaaccaggagacaagctggctatgaagtcttctccagtg
aaagtaggggtgaagaggaaagctgctgatgaaacccagtgcccgacaaaggtactgttg
gatgtcttcactggggtgcggctctacttgcctccttccacaccagacttcaaacagctc
aaacgctactttgtggcattcgatggagacctggtacaagaatttgacatggcctccgcc
acacatgtgctgggtaacagggacgacaacactgaggcccagctggtctctccagagtgg
atttgggcatgtatccggaaacggaggctgatagctccctgctag
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