Cricetulus griseus (Chinese hamster): 100765372
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Entry
100765372 CDS
T02813
Symbol
Atxn2l
Name
(RefSeq) LOW QUALITY PROTEIN: ataxin-2-like protein isoform X13
KO
K23625
ataxin 2/2L
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge05014
Amyotrophic lateral sclerosis
cge05017
Spinocerebellar ataxia
cge05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100765372 (Atxn2l)
05017 Spinocerebellar ataxia
100765372 (Atxn2l)
05022 Pathways of neurodegeneration - multiple diseases
100765372 (Atxn2l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cge03019
]
100765372 (Atxn2l)
Messenger RNA biogenesis [BR:
cge03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100765372 (Atxn2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
DUF5415
Motif
Other DBs
NCBI-GeneID:
100765372
NCBI-ProteinID:
XP_027260470
UniProt:
A0A9J7JIY3
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All DBs
Position
3:74268132..74279754
Genome browser
AA seq
1043 aa
AA seq
DB search
MLKPQPPQQTSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLPATTAXPGPPAAVSPCLG
PAAAAAAGSGLRRGPDSILAAPAQHQERPGAVAIGSVRGQSTGKGPPQSPVFEGVYNNSR
MLHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKASEPAGGPRREDIVDT
MVFKPSDVLLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDGNSDDYD
LESDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLARE
IESSPQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPSLVSREGKYIPLPQRVREGPRG
GVRCSGSRGGRPGLSSLPPRGPHHLDNSSPGPGSEARGINGGPSRMSPKAQRPLRGAKTL
SSPNNRPSGEASVPPTPAVGRMYPPRSPKSAAPAPVSASCPEPPIGSAVVSSASIPASSS
VVDPGAGSISPASPKISLAPTDVKELPTKEPGRTLEAQELARIAGKVPGLQNEQKRFQLE
ELRKFGAQFKLQPSSSPETGLDPFPSRILKEEAKGKEKEVDGLLTSDPMGSPVSSKTESI
LDKEDKPPLAAVGGTEGPEQLPPSCPSQTGSPPVGLIKGDDKEEGPVAEQVKKSTLNPNA
KEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISYIPQIHMGPAV
QAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAAGPPLVAAT
PYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVSSSTPQY
PSAEQPTPQALYATVHQSYPHHATQLHGHQPQPATTPTGSQPQSQHAAPSPVQHQAGQAP
HLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHPHQQLPHGFTNMA
HVTQAHVQTGVTAAPPPHPGAPHPPQVMLLHPPQGHGGPPQGAVPPSGVPALSASTPSPY
PYIGHPQAPLPPPGELKIVLAAT
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcctcagccgccacaacagacctcccagccccagcagccgccccccacgcaa
caggccgtggcccgcaggcctcccggcgggaccagccctcctaacggcggcctcccgggg
ccgctgcccgccaccacggctnnccccgggcctcctgccgccgtctctccctgcctgggg
cctgcagccgccgccgccgccgggagcgggcttcgccgcggacccgacagcatcttggcg
gcgccagcgcagcatcaagagcggccaggggccgtggctatcggcagcgtcaggggacag
agcaccggaaagggacccccacagtcacccgtgtttgaaggtgtctataataattccagg
atgcttcatttcctgaccgctgtggtgggttctacttgtgatgtgaaggtgaaaaatggc
accacttacgagggcatttttaagactctgagctcaaagtttgaactggcagtagacgca
gtgcaccggaaagcatctgagccagcaggtgggcctcgtcgggaagacattgtggacacc
atggtgtttaaaccaagtgatgttcttcttgtccacttccgaaatgttgacttcaattac
gctactaaagacaagttcactgactcggccatagccatgaactctaaggtgaatggagaa
cacaaagagaaggtgcttcaacgctgggagggcggtgacggcaacagtgatgactacgat
ctggaatccgatatgtccaatggatgggatcccaacgagatgttcaaatttaatgaggag
aactatggagtgaagaccacttatgacagcagtctgtcttcttacacggttcccttggaa
aaggacaactcagaagagtttcgacagcgggagcttcgtgcagctcagttggctcgagag
attgagtctagtccccagtaccgcctacggattgccatggaaaatgatgatgggcgaaca
gaggaggagaagcacagtgcagttcaacggcaggggtctgggcgggagagccccagcttg
gtatccagggaggggaagtatatccctctgcctcaacgagttcgggaaggtccccgggga
ggagttcgatgcagcggttctcgaggagggcggcctggccttagctctttgccacctcgt
ggccctcaccatcttgacaacagcagccctggccctgggtctgaggcacgtggtatcaat
ggaggcccttcccgaatgtctcccaaggcacagcggcctctgagaggtgccaagacttta
tcttcccccaacaataggccttctggagaagcttccgttcctccaacacctgcagtgggc
cggatgtaccctccacggtctcctaagtctgctgcccccgccccagtctcagcttcctgt
cctgagcctcccattggttcagcagtagtgtcctctgcctccatccctgcgtcatcatca
gttgtggatcctggagcaggctctatttccccagcgtctcccaaaatctccctggccccc
acagatgtaaaagaactcccaaccaaggagcctggtaggactttggaggcccaagagctg
gcccgaatagctgggaaagttcctggccttcagaatgaacaaaaacgatttcagttggaa
gaactgaggaagtttggagcccaatttaagcttcaacccagtagctcccctgagaccggc
ctggatccatttccttcccggatcttaaaagaagaggccaaaggaaaggagaaggaggtg
gatggcctattgacttcagatcccatgggatccccagtctcctcaaagacagaatccata
ttggataaggaagacaaaccacccctggcagcagtagggggcactgaggggccagagcag
ctcccaccatcttgccccagccaaactggcagtcctccagtgggtctcatcaagggagat
gacaaagaggagggccctgttgctgaacaagtaaagaagtccactttgaaccccaatgct
aaggagttcaatccaacaaagcctctgctgtctgtgaacaaatctaccagtactccaact
tcaccagggccccgaactcactcaacaccttccataccggtgctgacagcaggccagagt
gggctctacagtccccagtacatctcatatatacctcagatccacatgggaccagctgtg
caggcgcctcagatgtatccatatcccgtatccaattcggtgcctgggcagcagggcaag
taccggggtgcaaaaggctcacttcccccgcagcgctcagaccaacaccagccagcctca
gcccctccgatgatgcaggctgctgctgctgctgctggcccacccctggtggctgccaca
ccttattcttcctacatcccctacaacccacagcagttcccaggccagcctgccatgatg
cagcccatggcacactacccttcacagccggtgtttgcccctatgcttcaaagtaaccca
cgaatgttgacatcgggaagccacccccaggccattgtttcatcttccactcctcagtac
ccctctgcagagcagcctaccccccaagccctctatgctactgttcaccagtcctatcca
caccatgctacacagctccatggccaccagccgcagccggctaccacgcctactgggagt
cagccacaatcccagcatgcggcccctagtcctgttcagcaccaggccgggcaggcccca
cacctgggcagtggacagccacagcagaatctgtaccatccaggggccctaacaggcacg
ccgccttctctaccaccgggaccttctgcccagtcccctcagagcagctttccccagcca
gctgctgtgtatgccatccatccccaccagcagctgccccacggcttcaccaacatggcc
catgttacccaggcccatgtccaaactggagtcacagcagccccgcccccacaccctggg
gcacctcacccgccccaggtgatgctgctgcaccccccccagggccatgggggccccccc
caaggcgcggtgcccccgagtggggtgcctgcactctcagcttccacaccctcaccctac
ccctacatcggacacccccaagctccccttccaccccccggggaactgaagattgtcctg
gccgcgacctga
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