Cricetulus griseus (Chinese hamster): 100765502
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Entry
100765502 CDS
T02813
Symbol
Pum1
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100765502 (Pum1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
DUF6922
Motif
Other DBs
NCBI-GeneID:
100765502
NCBI-ProteinID:
XP_027255243
UniProt:
A0A9J7FAF3
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All DBs
Position
2:complement(22442557..22553763)
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AA seq
1192 aa
AA seq
DB search
MSVACVLKRKAVLWQDSFSPHLKHHPQEPANPNMPVVLTSGTGSQAQPQPAANQALAAGT
HSSPVPGSIGVAGRSQDDAMVDYFFQRQHGEQLGGGGSGGGGYNTSKHRWPTGDNIHAEH
QVRSMDELNHDFQALALEGRAMGEQLLPGKKFWETDESSKDGPKGIFLGDQWRDSAWGTS
DHSVSQPIMVQRRPGQNFHVNSEVNSVLSPRSESGGLGVSMVEYVLSSSPGDSCLRKGGF
GPRDADSDENDKGEKKNKGTFDGDKLGDLKEEGDVMDKTNGLPVQNGIDADVKDFSRTPG
NCQNSANEVDLLGPNQNGSEGLAQLTSTNGAKPVEDFSNMESQSVPLDPMEHVGMEPLQF
DYSGTQVPVDSAAATVGLFDYNSQQQLFQRPNALAVQQLTAAQQQQYALAAAHQPHIGVF
PAGLAPAAFVPNPYIISAAPPGTDPYTAGLAAAATLGPAVVPHQYYGVTPWGVYPASLFQ
QQAAAAAAATNSATQQSAPQAQQGQQQVLRGGASQRPLTPNQNQQGQQTDPLVAAAAVNS
ALAFGQGLAAGMPGYPVLAPAAYYDQTGALVVNAGARNGLGAPVRLVAPAPVIISSSAAQ
AAVAAAAASANGAAGGLAGTTNGPFRPLGTQQPQPQPQQPSNNLASSSFYGNNSLSSNSQ
SSSLFSQGSAQPANTSLGFGSSSSLGATLGSALGGFGTAVANSNTGSGSRRDSLTGSSDL
YKRTSSSLTPIGHSFYNGLSFSSSPGPVGMPLPSQGPGHSQTPPPSLSSHGSSSSLNLGG
LTNGSGRYISAAPGAEAKYRSASSASSLFSPSSTLFSSSRLRYGLSDVMPSGRSRLLEDF
RNNRYPNLQLREIVGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDV
FGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMV
RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRIL
EHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQ
HKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEP
GQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPICGPPNGII
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgcatgtgtcttgaagagaaaagcagtgctttggcaggactctttcagcccc
cacctgaaacatcaccctcaagaaccagctaatcccaacatgcctgttgttttgacatct
ggaacagggtcgcaagcgcagccacaaccagctgcaaatcaggctcttgcagctgggaca
cactccagccctgtcccaggatccataggagttgcaggccgttctcaggacgacgctatg
gtggactacttctttcagaggcagcatggtgagcagcttgggggaggaggaagtggtgga
ggcggctataatactagcaaacatcgatggcctacaggggataacattcatgcagaacac
caggtacgctctatggatgaattaaatcatgattttcaagcacttgctctggagggaaga
gctatgggtgagcagctcttgccaggtaaaaagttttgggaaacagatgaatccagcaaa
gatggaccaaaaggaatattcctgggtgatcaatggcgagacagtgcctggggaacatca
gatcattcagtttcccagccaatcatggtgcagagaagacctggtcagaatttccatgtg
aacagtgaggtcaattctgtactgtccccacgatcggagagtgggggactaggcgttagc
atggtggagtatgtgttgagctcatccccgggcgattcctgtctaagaaaaggaggattt
ggcccaagggatgcagacagtgatgaaaacgacaaaggtgaaaagaagaacaagggtacg
tttgatggagataagctaggagatttgaaggaggagggtgatgtgatggacaagaccaat
ggtttaccagtgcagaatgggattgatgcagacgtcaaagattttagccgtacccctggt
aattgccagaactctgctaatgaagtggatcttctgggtccaaaccagaatggttctgag
ggcttagcccagctgaccagcaccaatggtgccaagcctgtggaggatttctccaacatg
gagtcccagagtgtccccttggaccccatggaacatgtgggcatggagcctctgcagttt
gattattcaggcacgcaggtacctgtggactcagcagcagcaactgtgggactttttgac
tacaattctcaacaacagctattccaaagacccaatgcgcttgctgtccagcagttgaca
gctgcccaacagcagcagtatgcgcttgcagccgcccaccagcctcacatcggtgtgttt
ccagcaggtttagctcccgctgcatttgtccccaacccatacatcatcagcgctgctccc
ccagggacggacccctacacagctggattggctgcagcagcgacacttggtccagctgtg
gtccctcaccaatattatggagtcactccatggggcgtctaccctgccagtcttttccag
cagcaagctgctgcagctgcagccgcaacgaattctgctactcagcagagtgctccacag
gcccagcaaggacagcagcaggttcttcgtggaggagctagccagcgtcctttgacccca
aatcagaaccagcagggacaacaaacagatccccttgtagcagctgcagcagtgaattct
gctcttgcctttggacaaggtcttgctgcaggcatgccaggttatcccgtcttggcacct
gctgcttactatgaccaaactggtgccctcgtggtgaatgcaggggcgagaaatggtctt
ggtgctccagttcggcttgttgctccggcgccagtcatcattagctcctcagctgcacaa
gcagctgtggcagcagctgcagcttcagcaaatggagcagccggtggtcttgctggaacc
acaaatggaccatttcgacctttaggcacccaacaaccccagccccagcctcagcagccc
agtaacaacctggcttccagctccttctatggcaacaactctctgagcagcaactcccag
agcagctccctcttctctcagggctctgcccagcctgccaacacgtccttgggattcggg
agcagcagttctcttggtgccaccctgggatcagcccttggagggtttggaacagcagtt
gcaaactccaacactggcagtggctcccgccgtgactccctgactggcagcagtgacctt
tataagaggacatcgagcagcttgacccccattggacacagtttttataacggccttagc
ttttcctcctctcctggacccgtgggcatgcctctccctagtcagggaccaggacattca
cagacaccacctccttccctctcttcacatggatcctcttcaagcttaaacctgggagga
ctgacaaatggcagtggaagatacatctctgctgctcctggtgccgaagccaagtaccgc
agcgcaagcagtgcctctagcctcttcagccccagcagcacccttttttcttcctctcgt
ttgagatatggactgtctgatgttatgccctctggcaggagcagacttttggaagatttt
cgaaataaccggtaccctaatttacaactacgggagattgttgggcatataatggaattt
tcccaagaccagcatgggtctagattcattcagctgaaactagagcgtgccacagcagct
gagcgccagcttgtcttcaacgaaatcctccaggctgcgtaccaacttatggtggatgtg
tttggaaattacgtcattcagaagttctttgaatttggcagccatgaacagaagctggct
ttggctgagaggattcgaggccatgtcctgtcattggcactgcagatgtatggctgccga
gttatccagaaagctttggaatttattccctcagaccagcaggtaattaatgagatggtg
cgggagctagatggccatgtcctgaagtgtgtgaaagaccagaatggcaaccatgtggtt
cagaagtgcatagaatgtgtacagccccagtctttgcagtttatcattgatgcattcaag
gggcaggtgtttgccttgtctacgcacccttatgggtgcagggtgattcagaggatcctg
gagcactgtctccctgaccagactctccctatcctcgaggagcttcaccagcatacggag
cagcttgtacaggatcaatatggaaattatgtaatacaacatgtactggagcatggtcgt
cctgaggataaaagcaaaattgtagcagagatccgaggcaatgtacttgtattgagtcag
cacaaatttgcaagtaatgttgtggaaaagtgtgtcactcatgcttcacgtacagaacgt
gctgtgctcattgatgaggtatgcaccatgaatgatggtccccacagtgccttatacacc
atgatgaaggatcagtatgccaactatgtggtccagaagatgatcgatgtggctgagcca
ggtcagcggaagattgtcatgcacaagatccggccacacatcgcgactctgcgaaagtac
acctatggcaagcacatcctggccaagctggagaagtactacatgaagaatggcgtcgac
ttggggcccatctgtggcccccctaatggtatcatctga
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integrated database retrieval system
