Cricetulus griseus (Chinese hamster): 100765831
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Entry
100765831 CDS
T02813
Symbol
Tcof1
Name
(RefSeq) treacle protein isoform X4
KO
K14562
Treacher Collins syndrome protein
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100765831 (Tcof1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cge03009
]
100765831 (Tcof1)
Ribosome biogenesis [BR:
cge03009
]
Eukaryotic type
90S particles
Other 90S particles
100765831 (Tcof1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Treacle
Motif
Other DBs
NCBI-GeneID:
100765831
NCBI-ProteinID:
XP_027258613
UniProt:
A0A9J7FIP8
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All DBs
Position
2:178249874..178284029
Genome browser
AA seq
1331 aa
AA seq
DB search
MAEARKRRELLPLIYHHLLQAGYVRAAREVKEQSGQKSFLTQPTTLLDIYTHWQQTSELG
QKQKAKDDASLQAKQSRVSDPISSSESSEEEEEEAETKTAKAIPRPTSVNSIATAADLPS
SMKEKAQAKTKTANKMVNSVQQPASGKAVVHLLSGKSPKKSAEPLANTVLASETEEEGSV
PALGATAKPGVLSTGQASSSSEDTSSSSDETDVEVKVSVKPAQAKVSPAPAKEPPARTAP
CPTKSGSGMPRLQEGTPAAPGRTAHAEESESSEEDSESEDEPPAGMPSQVKAPGKVLHGR
AASVSAKEVSGKGPTSAPPEKTRPIVTPAKAGKPEKETESSSEDSSDSEDEEPVAVMTTP
QVRPSGKNPQVKSTSTPAKGSSQKGAPPVTSGKAGPAAAQAQAGKPEESDSSSEGSESDS
GKTPAAVTLSTSSAQVKPLGKSQQVRPASTVSLGPSGKGARPPCPGKTGSAVLGVQMGKV
EEDSESSSEDSDDGAVTPAKAKALGKRATPALPQKAGPVAAQVKIERRKEDSESSEESSE
ESTDSEEEAAPAASAPAQAKPDLEKQTKASPRKGTPATPASAMVSSMRVSTAPSSEEGSG
AAPGTTRVQGKSVGKGLQGKGDLGQGMAPVHPERPGPTVAHVRITAQEDSEDSEEESSSE
EDETSAQAKPLGKPLQAKAIPPPTKASPAKRPTSASGKVSPSKGKPPMSTVQNSALSARV
PATGKAGAPAVQAQKGLVAGAGQDSESSSEEESDSEEEAPAQTKPVGKTSQVRAASAPAK
ESPGKGAHPGATKKTGPTSAQAQTGKTEGSESSSEESDSDGEMPSAIIPAQGGASQPAKS
RASAPAAPEKSIEDSSESSDEELPSSQVIKPPLISVNPNRSPAATLSQVQAVSNPRKAQA
SGTMAQSSSSESEDEDMIPDTQPSTHATKANVVTVPTSLPRTAPQPSKSEQSSRMPKGKK
PKAASTQQISSDVKTLPVTPPQSTPVQSKTTNKPRKPKLPAKQQPPSTYRSSSSDSSDTS
SGSEEDAKRPQVATSAPRLDPHLSQKETVVEETPDESGEDELVAPSQVLARSLLSGYVTP
GATVANSQASKATSRPDSNPLVSSAPVTKDNPDGKQKAKSQDAADTVFPKTGRKETSSDT
TPPKPKKAKKSTWTSATPTQALQNSITQCLREQSWSLSEAQVQASVVKVLAELLEQERQK
ATEAIKESGKKGKKRKLSGDQLAAGAPESKKKASGTSKTKSKLDEVNADGKGKGSSGSQG
AKAKPESELGLKVESGQQNDTKNKKEKKKSSKKKKSKDKKGKKKGKKTSAKDPDSQIKKK
KKKKKTAEPAV
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggccaggaagcggcgggagctgcttcccctcatctaccatcacctgctgcag
gctggctacgtccgcgcggcgagggaagtgaaggaacagagcggccagaagagtttcctg
actcagcccaccacccttctggacatctatacacactggcaacagacctcagagctcggc
cagaaacagaaggcaaaggatgatgcatcactgcaagccaagcagtcccgggtgtcagac
cccattagcagctcagagagctcagaggaggaggaagaggaggcagaaaccaaaactgcc
aaagccatcccaagaccgacatctgtcaattccatagccacggctgcagatttgccatca
agcatgaaggaaaaggcccaggcgaagaccaagacagccaacaagatggtgaactctgtg
cagcaacctgcatcaggaaaagcggtggtccacctgctctctgggaagtcacccaagaag
tcagcagagcccttggcaaacactgtcttggcctccgaaactgaggaggagggcagtgtc
ccagcccttggagccactgccaagcctggagtgttgtcaacgggccaagccagcagttcc
agtgaagacacctccagctcaagtgatgagacagacgtagaggtgaaagtttcagtaaaa
ccagcccaggccaaagtttccccagcccctgccaaggagcctcctgcaaggacagcccca
tgccctaccaagtcagggagtgggatgccccggctccaagaaggtacaccagccgctcca
gggaggactgcacatgcagaagagtctgagagcagtgaagaggactctgagagtgaggat
gagcctcctgctgggatgcctagccaggtaaaggcccctggaaaagttcttcatggcaga
gctgcctcggtttctgccaaggaggtttctggaaaagggcccacctcagcaccaccagag
aagactaggccgatagtcaccccagccaaggcaggaaagcccgagaaggagacagagagc
agcagcgaggacagttccgacagtgaggatgaagagccagttgctgtgatgaccactcct
caggtgaggccttccgggaagaaccctcaggtcaaaagtacctcaacccctgccaagggg
tcctcccagaaaggggctcctccagtcacctctgggaaggcaggccctgcagcagctcag
gcccaggcagggaagccggaggaatcggacagcagcagtgaggggtcagagagcgacagt
ggcaagacgcccgcagctgtgaccctaagcacaagttctgcccaggtgaaacctttgggg
aaaagccagcaggtcagacctgcttccactgtaagcctggggccctcgggaaaaggcgcc
cgcccaccctgccctgggaagacagggtcagcagttctcggagtccaaatgggaaaggta
gaagaggactcagagagcagcagtgaggactctgacgacggggctgtgaccccagccaag
gcaaaagccttggggaaaagggctacccctgcactccctcagaaggcagggcctgtggct
gcccaggtcaagattgaaaggcgcaaagaagactcagagagcagtgaggagtccagtgaa
gagtcgactgatagcgaagaggaggcagccccagcagcttctgctccagctcaggccaaa
ccagatctggaaaagcagacaaaagcttcccctaggaaaggcaccccagccacccctgca
tctgccatggtctcctctatgcgagtgagcaccgcaccctctagtgaggaggggtcagga
gctgctcctggcactacaagggtgcaggggaagtctgtggggaagggcctccaagggaaa
ggtgacttgggacaagggatggccccagtgcaccctgagaggccggggcctacagttgcc
catgtcaggattacagctcaggaagactcagaggacagcgaggaggaatccagcagtgag
gaagatgagacctcagcacaggctaagcccttggggaaacctcttcaggccaaagccatc
ccacctcccactaaggcatctccagccaaacggccaacatctgcatctggaaaagtgagc
ccatccaagggaaagccacccatgagtactgtccagaacagtgctctctctgcaagggtg
ccagccacagggaaagcaggggccccagcagtgcaagcacagaaggggctagtggctgga
gcagggcaggactcggagagcagcagtgaagaagagtctgacagtgaagaagaggcacca
gctcagacaaaacctgtggggaaaacctctcaggttagagctgcctcagcccctgccaag
gagtcccctggaaaaggagcccatccaggagccaccaagaagacaggacctacatctgcc
caggcccagacagggaagacagaaggctcagagagcagtagtgaagaatcggacagtgat
ggggagatgccatcagccatcatcccagcccagggtggtgcctcccaacctgctaagagc
agagcctcagcgcccgcagccccagagaagagcatagaggactcctcagagagcagtgat
gaggagctgccgtcctcccaggtgattaaaccccctctgatttctgtcaaccctaatcgt
agtccagctgccaccctttcacaagtccaggctgtgagcaacccaaggaaggcccaggcc
tcaggcaccatggcccagagctcctcctctgagagtgaggatgaagacatgattcctgat
acacagccctccactcatgccactaaagccaatgtggtaactgtacccacatccctccca
cggacagccccccaacccagcaagagtgagcagtctagtcggatgccaaaaggcaagaaa
ccaaaggcagcatctactcagcagatcagcagtgacgtgaaaacactccctgtgacacct
ccccagagcacacctgtccagtccaaaacaaccaacaagcccagaaaacccaaacttcct
gccaagcagcagcctccctcaacctaccgcagcagctcaagtgatagcagtgacacctct
tcagggagcgaggaggatgccaagagaccccaggtggctacgtcagccccgagactggat
ccacacctttcccagaaggagactgtggtagaggagacccctgatgaatccggtgaagat
gagttggtggcgccctcacaggtacttgccaggtctctcctctcaggttatgttactcct
ggggcgactgtggccaattcccaggcttcaaaagccacttctaggccagactccaaccct
ttggtttcctctgctccggtcaccaaagataacccagatggcaagcagaaagcaaaatcc
caggatgcagcagacaccgtgttccctaaaacaggtaggaaagagacctcttcagacacc
acacctccgaagcccaagaaggctaagaaaagcacctggacctcagcaacacccacacag
gctctgcagaacagcatcacccagtgcctccgggaacagtcctggtccctgagcgaggcg
caggtgcaggcctctgtggtgaaggttctggcagaactgctggagcaggaaaggcagaag
gccacagaggccatcaaggagagtgggaagaagggcaagaagcggaagctgtcgggggac
cagctagcagcaggggccccagagagcaagaagaaggcctctgggacttccaagacaaaa
tcaaagctagacgaagtaaatgctgatggcaaggggaagggatcatctggctcccaaggg
gccaaggcgaagcccgaaagtgagctggggttaaaagttgagagtggacagcagaatgac
acaaagaacaagaaggaaaagaagaaatccagtaaaaaaaaaaaaagcaaggacaaaaag
ggaaagaagaaaggaaagaagacgtcagccaaagaccctgactcacagatcaagaagaag
aagaaaaagaagaagacagcagagcctgccgtgtga
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