Cricetulus griseus (Chinese hamster): 100765854
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Entry
100765854 CDS
T02813
Symbol
Cnot3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X2
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100765854 (Cnot3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cge03019
]
100765854 (Cnot3)
Messenger RNA biogenesis [BR:
cge03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100765854 (Cnot3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100765854 (Cnot3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cluap1
DUF4407
Motif
Other DBs
NCBI-GeneID:
100765854
NCBI-ProteinID:
XP_027286797
UniProt:
A0A9J7KCT1
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Position
9:21563712..21579334
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AA seq
753 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRHIEKHRYH
VRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALV
ATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQS
PAKNGSKPVHSNQHPQSPAVPPTYPSGPPSATSALSSTPGNNGASTPAAPPSALGPKASP
APSHNSGTPAPYAQAVAPPNAGGASSAQPRPPSAQPSGGSGGSGGGSSSSSNSGAGGGGA
GKQNGATSYSSVVADSPAEVALSSSGGSSASSQALGPASGPHNPAPITSKESSTAAPTGA
GSAASGSGNNSGGPSLLVPLPVNPPSSPTPSFSEAKAAGTLLNGPPQFSTTPEIKAPEPL
SSLKSMAERAAISSGIEDPVPTLHLTERDIILSSTSAPPTSAQPPLQLSEVNIPLSLGVC
PLGPVSLTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTV
EFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFE
QGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaaactccaaggtgagattgatcgctgcctcaagaaggtgtccgaa
ggcgtggagcagtttgaagatatttggcaaaagctccacaatgcagccaacgcgaaccag
aaagaaaagtatgaggctgacctaaagaaggagattaagaagctacaacggctgagggac
cagatcaagacatgggtagcatccaacgagatcaaggacaaaaggcagctcatcgaaaac
cgcaagctcattgaaacgcaaatggaacggttcaaagttgtggaacgagagaccaaaacc
aaagcttatagcaaggagggcctaggtctggctcagaaggtggaccctgcccagaaggag
aaggaagaggttggccagtggcttacgaacaccattgacaccctaaatatgcaggtggac
cagtttgagagtgaggtggagtcactgtcggtgcagacacgcaagaagaagggcgacaag
gatcagaagcaggaccgcattgagggcctgaagcggcacatcgagaagcaccgataccac
gtgcgcatgctcgagaccatcctgcgcatgctggacaacgactccatcctggtggacgcc
atccgcaagatcaaggacgacgtggagtactacgtcgactcctcccaggaccccgacttc
gaggagaacgagttcctctacgacgacctggacctcgaggacattccacaggcgctggtc
gccacctccccacccagccacagccacatggaggacgagatcttcaaccagtccagcagc
acgcccacctcaacaacttccagctctcccatcccacccagcccagctaactgcactacg
gaaaactctgaagatgataagaagaggggccgctccacagacagtgaagtcagtcagtct
ccagccaaaaacggctccaagcctgtccacagcaaccagcacccccagtccccagctgtg
ccgcccacctacccctctggccccccatctgccacttctgccttgagctccacccctggc
aacaatggggcctctaccccagcagcacctccaagtgccctgggccccaaggccagtcca
gctcccagccacaactcgggtactcctgccccctatgcccaggctgtggccccacccaat
gccggcggggccagcagtgcccagccccggccccccagcgcccagccgagcgggggaagt
ggtggcagcggcggcgggagcagcagcagcagtaacagtggtgcaggcggaggaggggcc
ggcaagcagaacggcgccaccagctacagttcggttgtcgcggacagccctgcagaggtg
gccctgagcagcagcggggggagcagtgccagcagccaagccctggggcccgcttcgggc
cctcacaacccagctcccatcacctcaaaggaatccagtacggcagccccaacgggggct
gggagtgcggcttcaggctcagggaacaactcagggggacccagcctcttggtgccactg
cctgtgaatccccccagttctccaacacccagcttcagtgaggccaaggcagctgggacc
ctgctcaatggtcctccacagttcagcaccaccccagagatcaaggcccccgaaccgctg
agctctctgaaatccatggcagaacgggcagctatcagctctggcattgaggaccctgtg
ccaacgttacacctgacagagcgagacatcatcctgagcagcacatcagcaccccccacc
tcagcccagccacccctgcagctgtcagaggtgaacataccattgtcactgggcgtgtgt
ccactggggccagtgtccctcaccaaggagcagctctaccagcaggccatggaagaggcc
gcctggcaccacatgccccacccctctgactccgagcgcattcggcagtacctcccccgg
aacccttgcccgacgcccccctaccaccaccagatgccacccccacactcggacaccgtg
gagttctaccagcgcctgtcaaccgagacactcttcttcatcttctactatctggaggga
accaaggcgcagtacttggcagccaaggccctgaagaagcagtcctggagattccacacc
aagtacatgatgtggtttcagaggcatgaggagcccaagaccatcacagatgagtttgag
cagggcacctacatctactttgactacgagaagtggggccagcggaagaaagaaggcttc
acctttgagtaccgctacctggaggaccgggacctccagtga
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