Cricetulus griseus (Chinese hamster): 100766816
Help
Entry
100766816 CDS
T02813
Symbol
Col22a1
Name
(RefSeq) collagen alpha-1(XXII) chain isoform X2
KO
K16630
collagen type XXII alpha
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100766816 (Col22a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Laminin_G_3
DUF6672
Motif
Other DBs
NCBI-GeneID:
100766816
NCBI-ProteinID:
XP_027271060
UniProt:
A0A9J7JMP9
LinkDB
All DBs
Position
4:117262030..117548119
Genome browser
AA seq
1613 aa
AA seq
DB search
MSVPKNRKAMGVPRGSPSACILWMLLLWGGDSGCQAQRAGCKSVQYDLVFLLDTSSSVGK
EDFEKVRQWVANLVDTFEVGPDHTRVGVVRYSDRPTTAFELGRFSSREEVKAAARRITYH
GGNTNTGDALRYIISRSFSVQAGGRPGNRAFKQVTILLTDGRSQDLVLDAAAAAHASGIR
IFAVGVGAALKEELDEIASEPKSAHVFHVSDFNAIDKIRGKLRRRLCENVLCPSVRVEGD
HFKPTNGGTKEITGFDLMNLFRVKEILGKRENEAQSSYVRMGSFPVVHRTEDVFPQGLPD
EYAFVTTFRFRKTSRKEDWYIWQVMDQYGIPQVSIRLDGENKAVEYNAVGAMKDAVRVVF
RGSQVDDLFDRDWHKMAVSIQAHSVSLYINCVLVQTLPIEERENIDIQGKTVIGKRLYDS
VPIDFDLQRIVIYCDSRHAELETCCDIPSGPCQVTVVTEPPPVSPELPTPASEQIGFLKT
INCSCPAGEKGERGFAGPMGLPGQKGDSGSIGLMGAPGPKGEKGDPGRGPFIRGEKGEKG
SLGPPGPPGRDGSKGIRGEPGELGEPGLPGEVGMRGLQGPPGLPGPAGHVGAPGLQGEQG
ERGAPGEKGQQGLDGFPGKPGKTGEQGRPGPPGVTGSRGEKGDVGPAGPPGVPGSVVQRE
GLKGEQGVPGLRGHQGLPGPPGAPGLIGPEGRDGPPGPQGLRGKKGEVGPPGTPGALGPQ
GPPGPPGVQGPPGPGGSPGLPGELGFPGKPGPSGHVGPPGKDGLRGPPGLPGSKGEPGDP
GESGVPGIPGPRGEVGEQGLAGLPGKKGEVGLPGAPGFPGVHGEKGDQGEKGELGLPGLK
GAQGEKGEAGPAGPPGLPGSPSMFTPHPRMPGEQGPKGEKGDPGDPGALGPQGHPGELGP
QGPTGPPGAKGHNGAHGPPGAAGNPGAPGPAGPPGISGPPGSLGPPGVRGAPGKDGERGE
KGTAGQEGSPGPAGPRGDPGAPGLPGPPGKGKDGEPGLHGPPGLPGPLGTKGDRGTPGIP
GSPGSRGDPGIGVAGPPGPSGQPGDKGPPGSRGLPGLPGPQGPAGQDGAPGSPGERGPPG
KPGPSSLLSPEDINLLVKDMCNNCPPGPPGLPGLPGFKGDKGLPGKPGREGTEGKKGDTG
PQGLPGPPGIAGPQGNQGDRGAEGEVGQKGDQGHPGVPGFMGPPGNPGPPGADGKAGPAG
PPGLKGPQGKEGPPGPQGPSGIPGIPGEEGKQGRNGKPGPPGEPGKAGDPGLSGAEGARG
PQGFKGHTGDPGPPGLRGEPGTTGPPGREGSPGKDGDTGPAGLQGPRGPRGPPGSSGSPG
SAGDPGHPGAPGPKGNKGENGSPGLPGFLGPRGPPGEAGEIGAPGKEGAPGKPGEPGSKG
ERGDPGTKGDKGFPGGKGQPGDPGIPGHKGHTGLMGPQGQPGESGPPGPPGLPGQPGFPG
LRGESPSIDILRRLIEEELGKQLEAKLAYLLAQMPPIHMKSSHGRPGPPGPPGKDGLPGR
TGPIGEPGQPGQGGLEGPSGPMGPKGDRGVKGDPGTPGVGLRGEMGPPGIPGRPGEPGYA
KDGLPGSAGPQGERGPAGHPGPPGPPGPPGQCDPSQCAYFASLAARPSNVKGP
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttcccaagaacaggaaagccatgggtgtccccagagggagtccttcggcctgc
attctgtggatgctactgctgtggggaggggacagtggctgccaggcccaacgtgcaggc
tgcaaaagtgtgcagtatgacctggtcttcctcttggacacctcttccagtgtgggcaag
gaggactttgagaaggtgcgccagtgggtggccaacctggtagacacctttgaggtgggc
cctgatcacacccgtgtgggggtcgtgcgctacagtgaccggcccactacagcctttgaa
ctgggccgcttcagctcccgggaggaggtgaaggcagctgctcggcgcatcacctaccat
gggggcaacacaaacacaggcgatgcactgcgttacattatcagccgcagcttttctgtg
caggcaggtggccggcctggaaaccgtgccttcaagcaggtgaccatcctattgacggat
ggccgtagccaggacctggtgctggatgccgcagcagccgcccatgcatcaggcattcgc
attttcgcagttggtgtgggcgcagcactgaaggaggagctggacgagattgcttcagaa
cccaagtccgcgcatgtcttccatgtttccgacttcaacgccattgacaagatccgtggc
aagctgaggcgtcggctttgtgaaaacgtgctctgccccagtgttcgggttgaaggagac
cactttaaacccaccaatggaggaaccaaggaaatcacaggttttgatctgatgaatttg
ttccgtgtgaaggaaatcttggggaagagagaaaatgaagcacagagttcctatgtacgg
atgggttccttccctgtggtgcacagaactgaggatgtatttccccaaggtctgcctgat
gagtatgcctttgtcacgaccttccggttcaggaaaacatcacggaaagaagattggtac
atctggcaggtcatggaccagtatggcatcccacaggtctcaatccggctggatggtgag
aacaaggcagttgagtacaatgctgtgggtgctatgaaagatgctgtcagggtggtcttc
cgaggttcccaggttgatgacctctttgatcgtgactggcacaagatggctgtaagcatc
caggcacacagtgtgtccctctacattaactgtgtgctggttcagacactgcccattgaa
gagagggagaacatcgacatccaggggaagactgtgattggcaagcgactctatgacagt
gtgcccattgattttgacctgcagcggattgtgatttactgtgactccaggcatgcagaa
ctggagacttgctgtgacatcccatcgggtccgtgtcaggtgactgtggtgacagagcct
ccacctgtgtctccagagctgcccactcctgccagtgaacagattgggttcttgaagacc
atcaactgctcatgcccagctggagagaagggtgaaaggggctttgctggccctatggga
ctccctggtcagaagggagattcagggtctattggactaatgggtgctccaggacccaag
ggagaaaaaggagaccctgggagaggacccttcattcgaggagaaaagggtgagaaggga
tccttgggcccacctgggccacctggaagagatggcagtaaaggcataagaggggagcca
ggagagctgggagagccgggactgcctggagaggtgggcatgagggggcttcagggacct
cctggactgccaggacctgctgggcatgttggcgctccaggtctccaaggagaacaaggg
gaaaggggagctccaggagaaaagggtcagcaaggcctggatggattcccggggaagcct
ggaaagacaggagagcagggaagacctggacctcctggtgtaacaggatcccgaggagag
aagggagatgtgggacctgcaggaccccctggtgtgccaggctctgtggtgcagagagag
ggcctgaagggagagcagggagtccctggactaagaggtcaccaaggccttcctgggcct
ccaggagcaccaggtttgattggtccggaaggcagagatggaccccctgggcctcaaggt
cttcgagggaagaaaggtgaagtgggtccaccaggaacccctggagcactggggccacag
ggcccccctggaccacctggcgttcaagggccacctggacctggaggatccccgggttta
cctggagagctgggcttcccaggaaaacctgggccctctggtcatgtggggccacctgga
aaggatgggctgaggggaccacctggccttcctggctccaagggagaaccaggggaccct
ggagaaagtggcgtgcctggaattcctggacctcggggtgaagttggggagcagggcctt
gcaggtcttcctggcaagaagggggaagttggccttcctggtgctccaggcttcccagga
gtacatggagagaaaggagaccagggagaaaaaggtgaattgggacttcctgggctaaaa
ggtgcccaaggtgaaaagggtgaggctggtccagcaggcccccctggcttacctggaagt
ccatcaatgttcacaccacatccaagaatgccaggagagcaaggtcccaaaggagaaaag
ggtgaccctggtgaccctggtgccctgggaccacagggtcatcctggagaattgggccct
cagggacccactggacctccgggtgccaagggacataatggtgcacatgggcctccagga
gcagctggaaaccctggtgctccaggacctgcaggacccccgggtatcagtggcccccca
ggaagtttgggtccccctggtgtcagaggtgcccctgggaaagatggggagcgtggggaa
aagggaacagcagggcaggaaggcagcccggggccagctggtccacggggcgatcctggt
gctcctggcctccctgggccacctggaaaagggaaggatggggagccgggacttcatgga
ccacctgggttacctggtcccttaggaaccaagggtgatcgaggaacacctgggatacct
ggctctcctggcagtcgtggtgacccaggcataggggttgctggtccacctggcccttcg
ggacaaccaggagacaaaggacccccgggatctcgaggtttacctggattgcccggcccc
cagggaccagctggccaggatggtgcaccaggaagtccaggagaaagagggcctcctgga
aaaccaggcccttcttcacttctgtctccagaggacataaatctcctagtaaaggatatg
tgcaacaactgccctcctggtcccccaggcctcccaggtcttccaggtttcaaaggggac
aaaggtctcccaggaaagccagggagagaagggacagaaggcaaaaagggagatactggg
ccccaaggcctcccagggcctccaggcatagctggaccacagggaaaccaaggagatcgt
ggtgcagagggtgaggtgggacagaaaggcgatcagggtcaccctggagttccaggcttc
atgggcccaccagggaatcctgggccaccaggagcagatggaaaagcaggccctgcagga
ccaccaggacttaaaggtccccagggcaaagaaggccctcctggtcctcaaggcccatca
ggcattccaggaatcccaggagaagaaggcaaacagggcagaaatggaaaaccaggtccc
cctggagaaccgggtaaggcaggagatccaggcctatcaggagcagagggagccagaggt
cctcagggcttcaaaggacacacaggtgatcctggcccacctggtctaaggggagaacct
gggactactggaccccctggaagggaaggatcaccaggaaaagatggtgacactggacct
gcaggacttcagggtcccagaggaccaaggggcccaccgggtagcagtggatcacctgga
tccgcaggagaccctggccatccaggagccccaggcccaaagggaaacaaaggagaaaat
ggaagcccaggacttccaggttttttgggtccccgtgggcctccgggagaagcaggagag
ataggagctccaggcaaggagggtgctcctgggaagcctggagagccaggatccaaagga
gaaaggggagaccctggaaccaaaggtgacaaaggattcccaggtggaaagggccaacct
ggagaccctggaatcccaggccacaagggtcatactggcctgatgggtccccaaggacaa
ccaggggagagtggccctcctgggcccccaggactgcctggccagccaggatttccagga
ctgaggggtgagtctccatccattgacatcctgaggcgcctcattgaggaagagcttggg
aagcagctagaagctaaacttgcctacctcctggcccagatgcctcccatacacatgaag
tcctctcatggaagaccagggcccccaggaccccctggaaaagatgggcttccaggcaga
acaggccccataggtgaaccaggccagcctgggcagggaggtctggaaggaccctctgga
ccaatgggccccaaaggtgacagaggagtcaaaggtgaccctggcacacctggagttggc
ctccgaggagagatgggcccccctggaataccaggtcgacctggggaacctggctatgct
aaagatgggctcccaggaagtgcaggacctcaaggagagagaggaccagctggacatcct
ggccccccaggccctcctggccctccaggccagtgtgatccttcccagtgtgcgtacttc
gccagtcttgctgcccggccaagtaatgtgaagggcccatag
DBGET
integrated database retrieval system
