Cricetulus griseus (Chinese hamster): 100767364
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Entry
100767364 CDS
T02813
Symbol
Upf3b
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X2
KO
K14328
regulator of nonsense transcripts 3
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03013
Nucleocytoplasmic transport
cge03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100767364 (Upf3b)
03015 mRNA surveillance pathway
100767364 (Upf3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cge03019
]
100767364 (Upf3b)
Messenger RNA biogenesis [BR:
cge03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
100767364 (Upf3b)
mRNA cycle factors
P-body specific factors
100767364 (Upf3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
100767364
NCBI-ProteinID:
XP_027287753
UniProt:
A0A9J7GLF2
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All DBs
Position
X:29399222..29419484
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AA seq
483 aa
AA seq
DB search
MKEEKDHRPKEKRVTLLTPQGATGGSVGATAEGARGEDRHDRNRDRKDALSKVVIRRLPP
TLTKEQLQEHLQPMPEHDYFEFFANDTSLYPHMFARAYINFKNQEDILLFRDRFDGYVFL
DNKGQEYHAIVEFAPFQKAAKKRIKKRDTKVGTIDDDPEYRKFLETYATDNEKMTSTPET
LLEEIEAKNRELIAKRTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEE
KRKRKDIEKLKKIERVPEREKIKDEPKIKVHRFLLQAVNQKNLLKKPEKGDEKELDKRDK
AKRPDKENLTEERASGQSCTLPRRSDVELKDEKPKRLDDESIRDYRDRDRDYERDQERMM
RERERLKRQEEERRRQQQKERYEKEKAFKRKEEEMRREKEAFRDKGKKSENPESICASDK
IEKKDEVIKRDRIRNKDRPAMQLYQPGARSRSRLCPPDDKPGDSPVDKKQESGISHRKEG
GEE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagagaaagatcacaggcctaaggagaagcgagtgaccctgttaacgcctcag
ggtgccacaggcggcagcgtgggagctactgccgaaggcgccagaggggaagataggcac
gatcgcaacagagacaggaaagacgctttgagcaaggtggtaattcgaagattgcctccc
actttgaccaaggagcagcttcaggaacatcttcaacctatgcctgagcatgattatttt
gagttttttgctaatgatactagtctgtatcctcatatgtttgccagagcatatatcaac
tttaaaaaccaagaagacatccttttattcagggaccgatttgatggctatgtattcctt
gacaataaaggtcaggaatatcatgctatagtagaattcgcaccgtttcaaaaagctgcg
aaaaagaggattaagaaaagagatacaaaagttgggactatcgatgatgatccagaatac
agaaaatttttggagacttatgccacagataatgaaaaaatgacatctactcccgagaca
ctgctggaagaaatagaagccaaaaaccgagaattaatagctaaaaggacaaccccactt
ttgagcttcctgaagaacaagcagagaatgagagaagaaaagagggaagaaaggaggaga
cgcgaaatagaaaggaaaagacaaagagaagaagagagaagaaaatggaaagaagaggag
aaacgaaaaagaaaagatatagaaaagctaaagaagatagaaagagttccagaaagagaa
aaaataaaggatgaaccaaagattaaggtacacaggtttctgttacaagctgtgaatcag
aaaaatctgctcaagaaaccagaaaaaggagatgaaaaagaacttgataaaagagacaaa
gcaaagagaccggacaaagagaatctgactgaagaaagagccagtgggcaaagttgtact
ctgcccaggcgttctgatgttgaactgaaggatgaaaagccaaagaggcttgatgatgag
agtatcagagattacagagacagggatcgggattatgaacgagatcaggagcgcatgatg
cgagaacgagagaggctgaagcggcaggaagaagaacgccgcaggcagcagcagaaggag
cgctatgagaaagagaaggctttcaaacgaaaggaagaggaaatgaggagagagaaagaa
gcatttcgagataaaggaaagaagagtgagaatccagaatcaatatgtgcctcagacaaa
attgaaaagaaagatgaagtgattaagagagaccgcataaggaacaaggatcgtccagca
atgcagctttaccaaccaggagctcgaagccgaagtcgactctgtccccctgatgacaag
cctggagattcaccagtggacaaaaagcaggaaagtggtattagccatagaaaagaagga
ggagaggagtga
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