Cricetulus griseus (Chinese hamster): 100767645
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Entry
100767645 CDS
T02813
Name
(RefSeq) very low-density lipoprotein receptor isoform X5
KO
K20053
very low-density lipoprotein receptor
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge05017
Spinocerebellar ataxia
cge05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100767645
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100767645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cge04131
]
100767645
Membrane trafficking [BR:
cge04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
100767645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF_LRP2
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
100767645
NCBI-ProteinID:
XP_027262270
UniProt:
A0A8C2MB48
LinkDB
All DBs
Position
3:complement(34162536..34194608)
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AA seq
845 aa
AA seq
DB search
MGTSARWALWLLLALCWAPRDSCASASGKKAKCDNSQFQCTNGRCITLLWKCDGDEDCVD
GSDEKNCVKKTCAESDFVCKNGQCVPNRWQCDGDPDCEDGSDESPEQCHMRTCRINEISC
GARSTQCIPVSWRCDGENDCDNGEDEENCGNITCSADEFTCSSGRCVSRNFVCNGQDDCD
DGSDELDCAPPTCGAHEFQCSTSSCIPLSWVCDDDADCSDQSDESLEQCGRQPVIHMKCP
ASEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGI
RDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCDQEQDCSDWSDEPLKECNVNEC
LVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKCE
CSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNTVALDADIAA
QKLFWADLSQKAIFSASIDDKVGRHFKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVA
TLDGAKRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTDDIQ
WPNGITLDLVKSRLYWLDSKLHMLSSVDLDGQDRRIVLKSLEFLAHPLALTIFEDRVYWI
DGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPSGKNWCEEDVQNGGCEYLCL
PAPQINDHSPKYTCSCPNGYSLEENGRECQRINVTTAVSEISVPPKGTSAAWAILPLLLL
VMAAVGGYLMWRNWQHKNMKSMNFDNPVYLKTTEEDLSIDIGRHSASVGHTYPAISVVST
DDDLA
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgtccgcgcgctgggcgctgtggctgctgctcgcgctgtgctgggcgccccgg
gacagctgcgcctctgcaagcgggaaaaaagccaaatgtgataattcccaattccagtgc
acaaatggccgctgcattactctgctgtggaaatgtgacggagatgaagactgtgttgat
ggcagtgatgaaaagaactgtgtaaagaagacatgtgccgagtctgacttcgtgtgcaaa
aatggtcagtgtgttcctaacagatggcagtgcgatggggaccctgactgtgaagatggt
tctgatgaaagcccagaacagtgccatatgagaacatgccgcataaatgaaatcagctgt
ggcgcccgttctactcagtgtatcccagtgtcctggagatgcgatggtgaaaatgattgt
gacaatggagaagatgaagaaaactgtggcaacataacatgtagtgctgatgagttcact
tgctccagtggccgctgtgtctccaggaactttgtgtgcaatggccaggatgactgtgat
gatggcagcgatgagctggactgtgcaccaccaacctgcggcgcccacgaattccagtgc
agcacctcttcctgcatccccctcagctgggtgtgtgatgatgatgcagactgttcggac
cagtcggatgagtctcttgaacagtgtggccgccagccagtgatacatatgaaatgtcct
gccagcgagatccagtgcggctctggcgagtgcattcacaaaaaatggcggtgtgacgga
gatcctgactgcaaggatggcagtgacgaggtcaactgcccctcccgaacctgcagacct
gaccagtttgaatgtgaagatggcagctgcatccatggcagcagacaatgcaatggcatc
cgagactgtgtggacggctctgatgaagtcaactgcaaaaacgtcaatcagtgcttgggc
cctggaaagttcaagtgcagaagtggagaatgcatagacattagcaaagtgtgtgaccag
gagcaggactgcagtgactggagtgatgagcccctgaaggaatgcaatgtcaatgaatgc
ttggtcaataacggtggctgttcccatatctgcaaagacctagttataggctatgaatgt
gactgcgcagctgggtttgaactgatagataggaaaacctgtggagatattgatgaatgc
caaaatccggggatctgcagtcaaatttgtatcaacttaaaaggcggttacaagtgtgaa
tgtagtcgtggctatcaaatggaccttgccactggcgtgtgcaaggcagtaggcaaagag
ccaagtctgatcttcactaatcggagagacatcaggaagattggcttagagaggaaggaa
tacatccagcttgtagaacaactaagaaacacggtggctctagatgctgacattgcagct
cagaagctattttgggctgatctaagccaaaaggccatcttcagtgcctcaattgatgac
aaggttggtagacattttaaaatgatcgacaatgtctataatcctgcagccattgctgtt
gattgggtgtacaagaccatctactggactgatgcggcttctaagactatttcagtagct
actctagacggagccaagaggaagttcctgtttaactctgacttgcgagagcctgcctcc
atagctgtggacccattgtctggctttgtttactggtccgactggggcgagccagctaaa
atagaaaaagcagggatgaatggatttgacaggcgcccactggtgactgatgacatccaa
tggcctaatggaattacacttgaccttgtcaaaagccgcctctactggctcgattccaag
ctgcacatgctatctagtgtggacttggatggccaagatcggagaatagtgctcaagtct
ctggaattcctagctcatcctcttgcactcacaatatttgaggatcgtgtctactggata
gatggagaaaatgaagcagtgtatggtgccaataaattcactgggtcagagctggctact
ctagtcaacaacctcaatgatgcccaagacatcattgtctaccatgaactcgttcagcca
tcaggtaaaaactggtgtgaagaagatgtgcagaatgggggatgtgaatacctctgccta
ccagcaccacagattaatgaccactctccgaaatatacctgttcctgtcccaacgggtac
agccttgaggaaaatggacgagagtgccaaaggatcaatgtgaccacagcagtatcagag
atcagtgttcccccaaaaggaacttcagctgcctgggccatccttcctctcttgctcttg
gtgatggcagcagtaggtgggtacttgatgtggcggaattggcaacataaaaacatgaaa
agcatgaactttgacaatcctgtgtacttaaagaccactgaagaggacctctcaatagac
attggtagacacagtgcttctgtcggacacacatacccagcaatatcagttgtcagcaca
gatgatgatctggcttga
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integrated database retrieval system
