Cricetulus griseus (Chinese hamster): 100767742
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Entry
100767742 CDS
T02813
Symbol
Trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71 isoform X2
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100767742 (Trim71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cge03019
]
100767742 (Trim71)
04121 Ubiquitin system [BR:
cge04121
]
100767742 (Trim71)
Enzymes [BR:
cge01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100767742 (Trim71)
Messenger RNA biogenesis [BR:
cge03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100767742 (Trim71)
Ubiquitin system [BR:
cge04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100767742 (Trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-C3HC4
zf-RING_5
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
100767742
NCBI-ProteinID:
XP_027271345
UniProt:
A0A8C2N4P6
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All DBs
Position
4:complement(221574017..221622444)
Genome browser
AA seq
855 aa
AA seq
DB search
MASFPETDFQICLLCKEMCGSPAPLSSSSSASSSSSQTSTSSAGGGGPGAAARRLHVLPC
LHAFCRPCLEAHRLPAPGGAGPTEALKLRCPVCDQKVVLAEAAGMDALPSSAFLLSNLLD
AVVATADEPPPKNGRAGGGPGGAGGHSNHRHHAHHPPQRAAAPAPQPPPGPAANPAALLL
RRQHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHYIERGPPGPAAASAAQQ
LGLGPPFAGAPFSILSVFPERLGFCQHHDEEVLHLYCDTCSVPICRECTLGRHGGHSFAY
LQDALQDSRALTIQLLADVQQGRQAIQLSIEQAQTVAEQVEMKSKVVQSEVKAVTARHKK
ALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLDSTVSAVQQVLEEGRALDILLA
RDRMLAQVQELKTIRSLLQPQEDDRVMFTPPDQALYLALKSFGFVSSGAFAPLTKATGDG
IKRALQGKVASFTVMGYDHDGEPRLSGGDLMSAVVLGPDGNLFGAEVSDQQNGTYVVSYR
PQLEGEHLVSVTLCNQHIENSPFKVVVKSGRSYVGIGLPGLSFGSEGDSEGKLCRPWGVS
VDKEGYIIVADRSNNRIQVFKPCGSFHHKFGTLGSRPGQFDRPAGVACDASRRIVVADKD
NHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRVQLFGPDGVF
LNKYGFEGSLWKHFDSPRGVAFNHEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGSNNGQ
FLRPQGVAVDQEGRIIVADSRNHRVQMFEANGSFLCKFGAQGSGFGQMDRPSGIAVTPDG
LIVVVDFGNNRILIF
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttccccgagaccgacttccagatctgcctgctgtgcaaggagatgtgcggc
tcgcccgcgccgctctcctccagttcgtccgcctcgtcgtcgtcgtcgcagacgtccacg
tcgtccgcgggaggcggcggtcccggggcggcggcgcggcgcctgcacgtcctgccctgc
ctgcacgccttctgccggccgtgcctcgaggcgcaccggctgcccgctcccggcggcgcc
ggccccaccgaggcgctcaagctgcgctgtcccgtgtgcgaccagaaggtggtcctggcc
gaggcggcgggcatggacgcgctgccgtcgtccgccttcctgctcagcaacctgctggac
gccgtggtggctaccgccgacgagccgccgcccaagaacgggcgcgcgggcggcggcccc
gggggcgcgggcggccacagcaaccaccggcaccacgcacaccacccgccccagcgcgcc
gccgctccggccccgcagccgccgcccggcccggccgccaaccccgccgcgcttctgctg
cgccggcagcacggctgcagctcgtgcgacgagggcaacgccgcctcgtcgcgctgcctc
gactgccaggaacacctgtgcgacaactgtgtccgcgcgcaccagcgcgtgcgtctcacg
aaggaccattacatcgagcgcggcccgccggggcccgcggccgcctccgcggcgcagcag
ctggggctcgggccgcccttcgccggcgcgcccttctccatcctttcggtgttcccagag
cggctcggcttctgccagcaccacgacgaagaggtgctgcacctatactgtgacacctgc
tctgttcccatctgcagagagtgcacgcttggccgccatgggggccacagctttgcctac
ctccaggacgccctccaggactcgagggccctcaccatccagttgctggctgatgtgcag
cagggccgccaagccatccagctgagcatcgagcaggcccagactgtggcagagcaggtg
gagatgaagtcaaaagtggtccagtcggaggtcaaggctgtgacagcccgccacaagaag
gccctggaggagcgcgagtgtgagctcttgtggaaggtggagaagatacggcaggtgaag
gccaaatctctatacctgcaggtggagaagcttcgtcagaacctcaacaagctggacagc
accgtcagtgcggtgcagcaggtcctggaagagggccgggccttggacatcctgctggcc
cgagaccggatgctggcccaggtgcaggagctgaagaccatccggagtctcctgcagccc
caggaagatgatcgagtgatgttcacgccccctgaccaagccttgtaccttgccctcaag
tcttttggctttgtcagcagtggggcctttgccccgctgacaaaggccacaggagatggc
attaagcgggcccttcagggcaaagtagcctccttcactgtgatgggctacgaccatgat
ggtgagcctcgcctctcggggggtgacctgatgtcagctgtggtcctgggccccgatggc
aacctgtttggtgcagaagtgagtgatcaacagaacgggacttacgtggtaagctacagg
ccccagcttgagggtgagcacctggtgtctgtgaccctgtgcaaccagcatatagagaat
agccccttcaaggtagtggtcaagtcaggccgcagctatgtgggtatcgggctccctggg
ctgagcttcggcagcgagggtgacagtgagggcaagctctgcaggccctggggcgtgagt
gtggataaggagggctacatcatcgtggctgaccgcagcaataaccgcatccaggtgttc
aagccctgtggctccttccaccacaagtttggtaccctgggttcccggcctgggcagttt
gaccggccagctggggtggcctgcgatgcctctcgaaggattgtagtggccgacaaagac
aatcatcgcattcagatcttcacctttgagggccagttcctcctcaagtttggtgagaag
ggaaccaagaatgggcagtttaactacccgtgggatgtagcagtgaattctgagggcaag
atcctggtctccgacacccgaaaccaccgcgtacagctgtttgggcctgatggggtcttc
ttgaataagtacggcttcgaggggtctctctggaagcactttgactctccacggggtgtg
gctttcaaccacgagggtcatctggtagtcaccgatttcaacaaccaccggcttctggtc
attcaccccgattgccaatcagcacgcttcttgggctcagagggcagcaacaatggacag
ttcctccgaccacagggcgtagccgtggaccaggaagggcgaatcattgtggccgattcc
agaaatcaccgggtgcagatgtttgaggccaacggcagcttcttgtgcaagttcggtgct
caaggcagcggcttcgggcagatggaccgcccctcaggtatcgcggtcaccccggatgga
ttgatcgtcgtggtggactttggcaacaatcgaatcctcatcttctaa
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