Cricetulus griseus (Chinese hamster): 100767882
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Entry
100767882 CDS
T02813
Symbol
Trim28
Name
(RefSeq) transcription intermediary factor 1-beta isoform X2
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
cge
Cricetulus griseus (Chinese hamster)
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cge01001
]
100767882 (Trim28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cge04121
]
100767882 (Trim28)
Enzymes [BR:
cge01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100767882 (Trim28)
Protein kinases [BR:
cge01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
100767882 (Trim28)
Ubiquitin system [BR:
cge04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100767882 (Trim28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_5
zf-RING_UBOX
PHD_2
zf-C3HC4
PHD-1st_NSD
zf-RING_2
YaaC
Motif
Other DBs
NCBI-GeneID:
100767882
NCBI-ProteinID:
XP_027286977
UniProt:
A0A9J7GN51
LinkDB
All DBs
Position
9:25591853..25621011
Genome browser
AA seq
1155 aa
AA seq
DB search
MAEVAPIGGPEHASVIAQAGVSELSITTLATPPPTALDARLERALEPGGCEPGPAPVALV
HRPLTLEIPGPAMGSESPGAGSGGGVARWRVSAELREEGTKAGAGTKPRAPRRIGNKGHT
RDSGGTLTPRLSIATPPAPRPARPGWRRPARVRGGVGRQIFLSRLRAAALSASGARSGTV
LSRVASRGARGPRRRAEAEEEEEAEEGGGAVVVVVLVVRKGARGARRAGVGPGKTRGGGG
GGGSAAAQARPGPGRWRRALVRLRGGLRAPPPPGGPPLPPPPAPPHPTPHPPGRENGGLG
GCSSLGGRPRGHGDLRQPRLGEGRRWAATSAPPPFCGHGRPRRRRRRRRRPLQRRRRRRR
PRGGGEAQELLEHCGVCRERLRPEREPRLLPCLHSACSACLGPAAPAAAAANSSGDGGGG
AAAAAAASAAGDGAMVDCPVCKQQCYSKDIVENYFMRDSGSKASSDSQDANQCCTSCEDN
APATSYCVECSEPLCETCVEAHQRVKYTKDHTVRSTGPAKTPDGERTVYCSVHKHEPLVL
FCESCDTLTCRDCQLNAHKDHQYQFLEDAVRNQRKLLASLVKRLGDKHATLQKNTKEVRS
SIRQVSDVQKRVQVDVKMAILQIMKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQ
KHQEHILRFASWALESDNNTALLLSKKLIYFQLHRALKMIVDPVEPHGEMKFQWDLNAWT
KSAEAFGKIVAERPGTNSTGPGPMAPPRAPGPLSKQGSGSSQPMEVQEGYGFGSDDPYSS
AEPHVSGMKRSRSGEGEVSGLMRKVPRVSLERLDLDLTADSQPPVFKVFPGSTTEDYNLI
VIERGAAAAAAGQTGTVPPGAPGALPLPGMAIVKEEETEAAIGAPPAATEGPETKPVLMA
LAEGPGAEGPRLASPSGSTSSGLEVVAPEGTSAPVGGPGVLDDSATICRVCQKPGDLVMC
NQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPDLKEEDGSLSLDGADSTGVVAKLSPVN
QRKCERVLLALFCHEPCRPLHQLATDSTFSMEQPGGTLDLTLIRARLQEKLSPPYSSPQE
FAQDVGRMFKQFNKLTEDKADVQSIIGLQRFFETRMNDAFGDTKFSAVLVEPPPLNLPSA
SLSSQELAGGPGDGP
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggtggccccgatcggtgggcctgagcacgcttccgtcatcgcccaggctggt
gtgagcgagctgtcaatcacaactctggccacgcccccccccacggcgctcgatgctaga
ctggagagggcgctcgaacccggaggctgcgagcctggacccgctccggtagccttagtt
cacaggccccttaccctggagatcccggggccagctatgggaagtgagagtccaggcgct
gggtctggtgggggcgtggcccgctggagggtgagcgctgagctgcgggaggaaggaaca
aaggctggggcggggacaaagccccgggcccccagacggattgggaacaaaggccacacc
cgggacagtggcgggacactcactcctcgcctctccattgccaccccgcccgcgccccgc
cccgcccgcccggggtggcggcgcccagcgcgcgtgcgcggcggcgtcgggcgccagata
tttctgtcccgcctccgggccgcggctctttctgcgagcggcgcgcggtcggggacggtc
ctttcgcgagtcgcgagccgaggagcgcgaggtccccggcggcgggccgaggcggaggag
gaggaggaggcggaggaggggggcggcgccgtcgtcgtcgtcgtcctcgtcgtccgcaag
ggagcgagaggcgcgcgccgcgcgggcgtcggccccgggaagacgcgtggcggcggcggc
ggcggcggctcggcggcagcgcaggctcggcccggccccggccgttggcggcgagcgctc
gtgcgcctgcgcggcggcctccgcgcccctcctcccccgggcgggccccccctccctccg
ccccccgcccccccccaccccaccccccaccccccggggcgggagaatggcggcctcggc
ggctgcagcagcctcggcggccggccgcgcggccacggcgacctccggcagccccggctc
ggcgagggccggcggtgggcggcgacaagcgccccgccgcccttctgcggccacggacgg
ccacggcgacggcgacggcggcggcggcggcctctgcagcggcggcggcggcggcgtcgc
ccgcggggcggtggcgaggcgcaggagctcctggagcactgcggcgtgtgccgcgagcgc
ctgcggcccgagcgggagcctcggctgctgccctgcctgcattcggcctgcagcgcgtgc
ctcggccccgccgcacccgccgcggcggcggcgaatagttccggggatggcggcggcggc
gcggcggcagcagcggcagcatcagcagcgggcgacggcgctatggtggattgtccagtg
tgcaagcagcagtgctactccaaagacatcgtggagaattatttcatgcgtgatagcggc
agtaaggcttcctccgattcacaggatgctaatcagtgctgtactagctgtgaagataat
gccccagccactagctattgtgtggagtgctctgagccactgtgtgagacctgtgtggag
gcccaccagcgggtgaagtataccaaggaccacactgtgcgctccacagggcctgctaag
actccagatggtgagcgcacagtctattgtagcgtccacaagcacgaaccccttgtgctc
ttctgtgagagctgtgacactctgacctgccgggactgccagctcaacgctcacaaggac
catcagtaccagtttttggaagatgcagtgcggaaccagcgtaaactcttggcctctctg
gtgaagcgcctgggggacaaacatgccacactgcagaagaacaccaaggaggttcgcagc
tctatccgccaggtctctgacgtgcagaagcgtgtgcaggtcgatgtcaagatggccatt
ctgcagatcatgaaggagctgaacaaacggggccgggttctggtcaatgatgcccagaaa
gtgacagaggggcagcaggagcgcctggagcgccagcactggaccatgaccaaaatccag
aagcatcaggaacacattttgcgatttgcttcttgggctctggagagtgataacaataca
gccctcttgctgtctaagaagctgatctatttccagctgcaccgcgctctcaaaatgatt
gtggaccccgtggaacctcatggggagatgaagtttcagtgggatctcaatgcctggacc
aagagtgcggaagcttttggtaagatcgtggctgagcgtcctggtacaaactccacaggt
cctgggcccatggctcctccaagagcgccagggcccctaagcaagcaaggctctggcagc
agccagcccatggaagtacaagagggctatggctttgggtcggatgatccatactccagc
gcagagccgcatgtgtctggcatgaagcggtcccgctctggtgagggggaggtaagtggc
ctcatgcggaaggtgccgcgtgtgagccttgaacgtctggatctggatctcactgctgat
agccagccaccagtcttcaaggtctttcctggcagcaccactgaggactacaatctgatt
gttattgagcgtggtgctgctgcagcagctgctggtcagactggaacagtgcctccagga
gctcctggtgccctaccgttgcctggcatggctattgtcaaggaagaagagacagaagct
gctattggagctccacctgctgccactgagggtcctgagaccaagcccgtattgatggct
ctggctgaaggccctggtgctgagggaccccgtctggcttcacctagtggcagtaccagc
tcaggcctggaagtggtggctcctgagggtacctcagcccctgtaggtggaccaggtgtc
ctggatgacagtgccactatctgtcgtgtctgccagaagccaggtgacctggtcatgtgc
aaccagtgcgagttttgctttcacctggattgccacctccctgccctgcaggacgtgcca
ggggaggagtggagttgctcactctgccatgtgctccctgacctaaaggaagaagatgga
agccttagcctggatggagcagatagcactggtgtggtagccaagctctcaccagtcaac
cagaggaaatgtgagcgtgttcttctggccctcttctgccacgaaccctgtcgtcccttg
caccagctggctactgattctacattctccatggagcagcctggtggtaccctagaccta
accctgatacgtgctcgtctccaagagaagctgtcacccccttatagttctccccaggag
tttgcccaagacgtgggccgcatgttcaagcagttcaacaagctgactgaggacaaggca
gatgtgcagtccatcatcggcctgcagcgcttctttgagacgcgcatgaatgacgccttt
ggtgacaccaagttttctgctgtgctggtagaaccgccaccgctgaaccttcccagtgct
agcctaagttctcaggagctggctggtggtcctggcgatggtccttga
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