Cricetulus griseus (Chinese hamster): 100767942
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Entry
100767942 CDS
T02813
Symbol
Hnrnpu
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U isoform X2
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100767942 (Hnrnpu)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cge03041
]
100767942 (Hnrnpu)
Spliceosome [BR:
cge03041
]
Common components
Common spliceosomal components
hnRNP proteins
100767942 (Hnrnpu)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
SRP54
AAA_17
AAA_18
Motif
Other DBs
NCBI-GeneID:
100767942
NCBI-ProteinID:
XP_027274665
UniProt:
A0A8C2MNN1
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All DBs
Position
5:15819037..15828929
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AA seq
798 aa
AA seq
DB search
MSSSPVNVKKLKVSELKEELKKRRLSDKGLKADLMDRLQAALDNEAGGRPAMEPGNGSLD
LGGDAAGRSGTGLEQEAATGAEDDEEEEGIAALDGDQMELGEENGAAGAADAGAMEEEEA
ASEDENGDDQGFQEGEDELGDEEEGAGDENGHGEQQSQPPAAAPQTPQQRGAGKEAAGKS
SGPTSLFAVTVAPPGARQGQPQAGGDGKTEQKGGDKKRGVKRPREDHGRGYFEYIEENKY
SRAKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRAS
YGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSLTTSGMLLGEEEFSYGYSLKGI
KTCNCETEDYGEKFDENDVITCFANFETDEVELSYAKNGQDLGVAFKISKEVLADRPLFP
HVLCHNCAVEFNFGQKEKPYFPIPEDYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLP
GAGKTTWVTKHAAENPGKYNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKF
IEIAARKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGK
DLPEHAVLKMKGNFTLPEVAECFDEITYVELQKEEAQKLLEQYKEESKKALPPEKKQNTG
SKKSNKNKSGKNQFNRGGGHRGRGGFNMRGGNFRGGAPGNRGGYNRRGNMPQRGGGGGSG
GIGYPYPRGPVFPGRGGYSNRGNYNRGGMPNRGNYNQNFRGRGNNRGYKNQSQGYNQWQQ
GQFWGQKPWSQHYHQGYY
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttcgcctgttaatgtcaagaagctgaaggtgtcggagctgaaggaggagctc
aagaagcggcgcctctccgacaagggcctcaaggccgatctcatggatcgactccaggcc
gcgctggacaacgaggccggcggccgccccgccatggagcccgggaacggcagcctcgac
ctgggcggcgatgcggccgggcgctcggggacgggcctcgagcaggaggccgcgaccggc
gccgaagacgacgaggaggaggaaggcatcgccgccctggacggcgaccagatggagctg
ggcgaggagaacggggcggcgggggcggctgacgcgggcgcgatggaggaggaggaggcg
gcgtcggaagacgagaacggcgacgaccagggcttccaggagggggaggacgagctcggc
gacgaggaggagggcgcgggcgacgagaacggccacggggagcagcagtcccaaccgccg
gcggcggccccgcagaccccgcagcagcgcggggccggcaaggaggccgcgggcaagagc
agcggccccacctcgctcttcgcggtgacggtggcgccgcccggggcgaggcagggccag
ccgcaggccggaggagacggtaaaacagaacagaaaggaggagataaaaagagaggtgtt
aaaagaccgcgagaagatcatggccgaggatattttgagtacattgaagaaaacaagtac
agcagagccaagtctcctcagccacctgttgaagaagaagacgaacacttcgatgacaca
gtggtttgtcttgatacttataactgtgatctgcattttaaaatatcgagagaccgcctc
agtgcttcttcccttactatggagagttttgcttttctctgggctggaggaagagcatct
tacggtgtatcaaaaggcaaagtctgttttgagatgaaggtaacagagaagatcccagta
aggcatttgtacacaaaagatattgatatacatgaagttcggattggctggtcactaact
acaagtggaatgttgcttggggaagaagaattttcttacgggtattctctgaaaggaata
aaaacatgcaactgcgagacagaagattatggggagaagtttgatgaaaatgatgtgatt
acatgttttgctaactttgaaactgatgaagttgaactctcctatgcgaagaatggacaa
gaccttggtgttgccttcaagatcagtaaggaagttcttgctgaccggccactgttcccg
cacgtgctctgccataactgtgcagttgaatttaattttggtcaaaaggaaaagccatat
tttccaatacctgaagactatacttttatccaaaatgtccccttagaggacagagttaga
ggaccaaagggacctgaagagaagaaggattgtgaagttgtaatgatgattggcttgcca
ggagctggcaaaactacctgggttactaagcatgcagctgaaaaccctgggaaatacaac
attcttggaacaaataccattatggacaaaatgatggtggcaggttttaagaagcaaatg
gcagatactggaaaactgaacacgctgttgcagagagctccacagtgtcttgggaagttt
attgagattgctgcccgcaagaagcggaattttattctggatcagacaaatgtgtctgct
gcggcccaaaggagaaaaatgtgcctgtttgcaggcttccagcgaaaagctgtcgtagtt
tgcccaaaagatgaagactataagcagaggacacagaagaaagcagaagtagaggggaaa
gacctaccagagcatgctgtccttaaaatgaaaggaaattttaccctgccagaggtggct
gagtgctttgatgaaataacctatgttgaacttcagaaggaagaagcccaaaagcttttg
gagcaatacaaggaagaaagcaaaaaggcactcccaccagaaaagaagcaaaatactggc
tcaaagaagagcaataaaaataagagtggcaagaaccagttcaacagaggtggtggccat
agaggacgtggaggattcaatatgcgaggtggcaatttcagaggtggagctcctggtaat
cgtggcggatataataggagaggcaatatgccacagagaggtggcggtggtggaagtggt
ggaattggctacccatacccccggggccctgtttttcctggccgaggtggttactcgaac
agaggaaattacaacagaggtggaatgcccaacagagggaactacaaccagaacttcaga
ggacgaggaaacaatcgtggctacaaaaatcaatctcagggctacaaccagtggcagcag
ggtcaattctggggtcagaagccatggagtcagcattatcaccaaggatattattga
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