Cricetulus griseus (Chinese hamster): 100768117
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Entry
100768117 CDS
T02813
Symbol
Col23a1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XXIII) chain isoform X2
KO
K24355
collagen type XXIII alpha
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100768117 (Col23a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cge00536
]
100768117 (Col23a1)
Glycosaminoglycan binding proteins [BR:
cge00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100768117 (Col23a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
100768117
NCBI-ProteinID:
XP_035304002
UniProt:
A0A9J7H6N3
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Position
7:65565468..65853312
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AA seq
569 aa
AA seq
DB search
MGAGERPSGGGGAQDPGAGCGARVLGALCLLLSVGSATACLLLGAQAAALHGRVEALEQE
REILRRAGRPXSPDAWAETHLERLLREKLDGVAKLRTVREAPSECICPPGPPGRRGKPGR
RGDPGPPGQSGRDGYPGPLGLDGKPGLPGPKGEKGAPGDFGPRGAQGQDGAAGPPGPPGP
PGARGPPGDTGKDGPRGAQGPAGPKGEPGQDGEMGPKGPPGPKPQLLSSQGDDGMPSQPG
LPGPPGPKGEPGDVGPQGENGVDGAPGLKGEPGHPGADGSAGPRGPPGLKGEQGDTVVID
YDGRILDALKGPPGPQGAPGPPGIPGAKGELGLPGAPGIDGEKGPKGSKGDPGEPGPAGP
KGETGEMGLSGLPGADGPKGEKGESASDRLQESLAQIIVEPGPPGPPGPPGPMGLQGIQG
PKGLDGAKGEKGALGERGPHGLPGPVGPPGLIGLPGTKGEKGRPGEPGLDGFPGPRGEKG
DRSERGEKGDRGVPGRKGVKGQKGEPGPPGLDQPCPVGPDGLPVPGCWHKEAGRKADRLL
WGNVFEDPWQGLAFLEMTKVKMPSSDPLG
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgggcgagcgcccgtcgggcgggggaggcgcgcaggaccccggcgcgggctgc
ggggcccgggtgctaggcgcgctgtgcctgctgctgtcggtgggctcggccaccgcctgt
ctgctgctgggcgcccaggcggccgcactgcacggccgagtggaggcgctggagcaggag
cgcgaaattttgcggcgcgcgggccgtccgnngagccctgacgcctgggccgaaacgcac
ctggagcgcctgctgcgggagaagctggatggagtcgccaagctccgcacagttcgggaa
gccccctctgagtgcatctgtcccccaggtccccctggacggcgtggcaagcctggacga
agaggcgaccccggtcctccagggcaatcaggacgagatggctacccgggacctctgggt
ctggacggaaagccaggacttccaggccccaagggggaaaagggtgcaccaggagacttt
ggcccgaggggagcccaagggcaagatggagctgcaggaccacctgggccccctggacca
cctggggcccggggccctcctggtgacactgggaaagatggccccagaggagctcaaggc
ccagcgggtcccaaaggagagcctggacaagatggcgagatgggccccaagggacctcca
ggacccaagcctcagctgttatcttctcagggagatgatgggatgcccagccagccagga
ctccctggacccccagggcccaagggtgagccaggagatgtggggccccaaggagagaat
ggagtggacggtgccccaggactgaagggggagccgggccacccaggtgcagatggatcc
gcagggccccggggtcccccaggcctcaagggagaacaaggtgacacagtggtaatcgac
tatgatggcaggatcttagatgccctgaagggtcctcctgggccacagggagctcccggg
ccaccagggatccctggagccaagggtgaacttggattgcctggtgccccaggaatcgat
ggagagaagggccccaaaggatcaaaaggggacccaggagagcctgggccagctggaccc
aaaggggagacaggcgagatgggcctgtcaggtcttccgggtgctgacggtcccaaggga
gaaaaaggagagtcagcatctgatcgcctccaggagagcctggcccagatcattgtggag
ccagggccacccggtcctcctggcccccctggccccatgggcctccaggggatccagggt
cccaagggcctggatggagccaagggagagaagggtgcattgggtgagagaggtcctcac
ggcctgcctggaccagttggcccaccaggccttattgggttaccaggaaccaaaggagag
aagggcagacctggagagccaggactcgatggtttccctggacccaggggagaaaagggc
gaccggagtgaacgtggagagaagggggatcgaggagttcctggccggaaaggagtgaag
ggccagaagggtgagcccggcccaccgggccttgaccagccatgccctgtgggtcctgat
ggcctgcccgtgcctggctgctggcataaggaagccggcaggaaagcggacaggctgctg
tggggaaatgtgtttgaggacccctggcagggcctggctttcctagagatgacgaaggtg
aaaatgcctagctcagacccccttggatga
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