Cricetulus griseus (Chinese hamster): 100768243
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Entry
100768243 CDS
T02813
Symbol
Rai1
Name
(RefSeq) retinoic acid-induced protein 1 isoform X2
KO
K19749
retinoic acid-induced protein 1
Organism
cge
Cricetulus griseus (Chinese hamster)
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cge03000
]
100768243 (Rai1)
Transcription factors [BR:
cge03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
100768243 (Rai1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
100768243
NCBI-ProteinID:
XP_027283109
UniProt:
A0A8C2L945
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All DBs
Position
7:74232551..74333270
Genome browser
AA seq
1880 aa
AA seq
DB search
MQSFRERCGFHGKQQNYPQTSQETSRLENYRQPGQAGLSCDRQRLLAKDYYNPQPYTGYE
GGTGTPSGTVATTAADKYHRGSKSLQGRPAFPSYVQDSSPYPGRYSGEEGLQTWGGPQPP
PPQPQPLPGAVSKYEENLMKKTVVPPNRQYPEQGPQLPFRTHSLHAPPPQPQQPLAYPKL
QRQKPQSDLASPLPFPQSSHFPQHSQSFPASSTFAPAVQGSGQGAHSYKSCTAPSAQPHD
RPMSANASLAPGQRVQNLHAYQSGRLGYEQQQQALQGRHHTQETLHYQNLAKYQHYGQQG
QGYCPPDTAVRTPEQYYQTFSPSSSHSPARSVGRSPSYSSTPSPLMPNLENFPYSQQPLS
TGAFPTGITDHSHFMPLLNPSPTDAASSVDPQVSNCKPLQKEKLPDNLLSDLSLQSLTAL
TSQVENISNTVQQLLLSKAAMPQKKGVKSLVSRTPEQHKSQHCSPEGSGYSAEPAGTPLS
EPPSSTPQSTHAEPQDTDYLSGSEDPLERSFLYCSQARGSPARVNNNSKAKPESVSTCSV
TSPDDMSTKSDDSFQSLHSTLPLDSFSKFVAGERDCPRLLLSALAQEDLASEILGLQEAI
VEKADKAWAEASSLPKDNGKPPFSLENHSTCLDTVAKTSWSQSGEPETLPEPLQLDKGGS
TKDFSPGLFEDPSVAFATTDPKKTTSPLSFGTKPLLGAATPDPTPAAFDCFPDTTTASSV
DSANPFAWPEENLGDACPRWGLHPGELTKSLEQGVKASDNVGKADAHEASACLGFQEDHA
IGKQAATLSGDFKQQEADGVKEEVGGLLQCPEVGKADQWLEDSRHCCSSTDFGDLPLLPP
PGRKEDLEAEEEYSSLCELLGSPEQRPSLQDPLSPKAPLICTKEEAEEVLDTKAGWASPC
HLSGEPAVLLGPSVGAESKVQSWFESSLSHMKPGEDGPEMERAPGSSTTSEGSLAPKPNK
PAVPEVPIAKKEPVPRGKSLRSRRVQRGLPEAEDSPCRVPALPKDLLLPESCTGPPQAQA
EGAGAPGRGLSEGLPRMCTRSLTALSEPQTPGPPGLTTTPTPPDKLGGKQRAAFKSGKRV
GKPSPKAASSPSNPAALPVASDSSPMGSKTKEPDSPSIPGKDQRSMVLRSRTKPQQVFHA
KRRRPSESRIPECRATKKLPANNHLPTAFKVSSGPQKEGRVSQRVKVPKPGTGSKLSDRP
LHALKRKSAFMAPVPTKKRSLILRSSSGSGADGREERPESSPGLLRRMASPQRARPRGSG
EPPPPPSLEPPAVCVGLATPSSLPSAVRTKVLPPRKGRGLKLEAIVQKITSPGLKKLACR
VAGAPPGTPRSPALPEKRSGGSPAGAEEGLGGMGPGQMLPAASGADTLCRNPASRSLKGK
LLSSKKLSSTADCPKAEAFMSPETLPSLGTARAPKKRSRKSRTGALGPSKGPLEKRPCPG
QTLILATHDRASSTQGGGEDSSSGGGKKPKTEELGLASQPPEGRPCQPQTRAQKQPGQAS
YSSYSKRKRLSRGRAKTTHASPCKGRATRRRQQQVLPLDPAEPEIRLKYISSCKRLRADS
RTPAFSPFVRVEKRDAYTTICTVVNSPGDEPKPHWKPSSSAASSSSLEPAGASLTAFPGG
PVLQPRPSLPLSSTMHLGPVVSKALSTSCLVCCLCQNPANFKDLGDLCGPYYPEHCLPKK
KPKLKEKVRLEGTFEEASLPLERTLKGLECAASTITTITTTTTLGRLSRPDGPADPAKQG
SLRTSARGLSRRLQSCYCCDGQGDGGEEVAPADKSRKHECSKEAPAEPGGDTQEHWVHEA
CAVWTSGVYLVAGKLFGLQEAMKVAVDMPCSSCHEAGATISCSYKGCIHTYHYPCANDTG
CTFIEENFTLKCPKHKRLPL
NT seq
5643 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttttcgagaaaggtgtggtttccatggcaaacagcaaaactacccacaaacc
tcacaggagacatcgcgcctggagaactacaggcagccaggtcaggctgggctcagctgt
gatcggcagcggcttctggccaaggactattacaacccacagccctatacaggctatgag
ggtggtactggcacgccttctggcaccgtggccacgacagctgcagacaagtaccaccga
ggcagcaagtccctgcaggggaggccggctttccccagctatgttcaagacagcagtccc
tacccagggcgctactctggcgaggagggtcttcagacctgggggggcccacagccacca
cctccccagccgcagcctttgccaggagcagtgagcaagtatgaggagaacttgatgaag
aagacggtggtgcccccaaacaggcagtaccctgagcagggcccccaactccccttccgg
actcacagcctgcatgcccccccaccacagcctcagcagcccctggcttaccccaaactc
caaaggcagaaaccacagagtgaccttgcctcacctctgcccttcccccagagcagccac
ttcccccagcattcccagtccttccctgcctcttccaccttcgccccagcagtgcagggc
agtgggcagggggcgcactcatacaagagttgcacagcaccatctgcccagcctcacgac
aggccaatgagtgccaatgccagcctggccccagggcagcgggtccagaatcttcacgct
taccaatcaggccgccttggctatgagcagcagcagcaagcacttcaaggccggcaccac
acccaggaaactctccactaccagaacctcgccaagtaccaacactatggacagcaaggc
cagggctactgtccaccagacacagctgtcaggactccagaacagtattaccagaccttc
agccctagctccagccactcccctgcacgttctgtgggtcgctccccttcctatagctcc
accccatcaccactgatgcccaatctggagaacttcccctatagccagcagccgcttagc
actggggccttccccactggcatcacagaccacagccactttatgcccttgctcaatcca
tccccaacagatgctgccagttctgtggacccccaggtcagcaactgcaagcccctgcaa
aaggagaagcttcccgacaacttgctgtcggacctcagcctgcagagcctcacagcactt
acctcacaggtggaaaacatctccaacactgtgcagcagctcttgctgtccaaagctgcc
atgccacagaagaagggggttaagagccttgtgtctaggactccagagcagcacaagagc
cagcactgtagccccgagggcagtggctactcagctgagccagcaggcacaccactgtct
gagccgccaagcagcacaccccaatccactcatgctgagccacaagacactgactacctg
agtggctccgaggacccactagagcgcagcttcctctactgcagccaggcccgtggcagt
cctgccagggtcaacaacaactccaaggctaagcctgaatcagtgtccacctgttctgtg
acctcacctgacgacatgtccaccaagtctgacgactctttccagagcctgcacagtacc
ctgccactggatagcttctccaaatttgtggccggcgagcgggactgcccacggctgctg
ctcagtgccctggcacaggaagatctggcctctgagatcctggggcttcaggaagccatc
gttgagaaggctgacaaggcctgggctgaggcttccagcctgcccaaggacaatggtaaa
cctcccttctcactggagaaccacagcacctgcctagacactgtggccaagacttcatgg
tcacagtcaggggaaccagaaaccctacctgagcccttgcagctggacaagggtggtagc
accaaggacttcagcccaggactgtttgaagacccttctgtggcctttgccaccactgac
ccgaagaagacaaccagtcccctgtcctttggcaccaagcctttgcttggagctgccact
ccagaccctaccccggcagcatttgactgctttccagacacaaccactgccagctcggtg
gacagtgccaatccctttgcctggccagaggagaacctgggtgatgcttgtccccgctgg
ggcctccaccctggtgagctcaccaagagcttggagcagggtgtaaaagcctcagacaat
gtgggcaaggcagatgcacatgaggcctctgcctgcttgggcttccaggaagaccatgcc
attgggaaacaagcagctactctgtctggggacttcaaacagcaggaggcagatggagtg
aaggaggaagtaggtgggttgctgcagtgccctgaggtgggcaaagctgaccagtggctg
gaagacagccggcattgctgttcctccactgactttggggacctgccactgttgccaccc
cctggcagaaaggaggacctggaggccgaagaggagtactcttccttgtgtgaactgttg
ggtagccctgagcagaggcctagcctgcaggacccattgtcccccaaggctccgctgatt
tgcaccaaggaggaagcagaggaggtgctggacaccaaggctggttgggcttccccatgt
cacctctctggggagcctgctgtcctgctgggcccctctgtgggtgccgaatccaaggtc
cagagctggtttgagtcttcactgtcacatatgaagccaggagaagatgggccagagatg
gagagagccccaggtagttccaccacttcagaaggctccctggccccaaagcctaacaag
cctgctgtgcctgaggtgcccattgcgaagaaagagcctgtgccacggggtaaaagttta
cggagccggcgggtacagcgagggctgcctgaggctgaagactctccgtgcagggtacca
gcacttcccaaagacctcttgctcccagagtcctgcacaggacccccccaggcacaggca
gaaggggctggagccccaggtcgggggctatcagaagggctccccagaatgtgcactcgc
tctcttacagctctgagtgagccccaaactcctggacctccaggcctgaccactaccccc
acacctcctgacaaactgggaggcaaacagcgagctgccttcaagtctggcaagcgggta
ggaaaaccatcacccaaggctgcatccagccccagcaaccctgctgccctgcctgttgcc
tcggacagtagccccatgggctccaagacgaaggagccagactctcccagcatccctggc
aaagaccagcgttccatggtccttcggtctcgcaccaaaccccagcaggtcttccatgcc
aaacggcggcggccctcagagagccggatcccagagtgtcgtgccaccaagaaactccct
gccaacaaccacttacccactgcattcaaggtctccagtgggccccagaaggaaggccgg
gtgagccagcgggtcaaagtacccaagcctggtacagggagcaagctttcagatcggcct
ctccatgcactcaaaaggaagtcagctttcatggctcctgtccccaccaaaaagcgaagc
ctcatccttcgcagcagcagtgggagtggggcagacgggagggaggagaggccggagagc
tctcctggtctcttgaggaggatggcctcaccccagagggccaggcccagaggcagtggg
gagccacccccacccccatccctggagccacctgccgtgtgcgtggggttggctacacca
tcatccctgcccagtgctgtgaggaccaaggtgctgccaccccgaaagggccgtggcctc
aagctggaggccatagtgcagaagatcacctcacctggtctcaaaaaacttgcatgcaga
gtagcaggggctcctcctgggacaccccggagcccagccctgcctgagaaacggtcaggg
ggcagtccagctggggcagaagagggcctaggaggaatgggccctgggcagatgctacca
gcagcttcaggagctgacacattgtgcagaaatccagccagcaggtccctaaaaggcaaa
ctcttgagtagtaagaaactgtcctctactgctgactgtcctaaagctgaggccttcatg
tccccagagactctgccatccctagggactgctcgggcaccgaagaaaaggagccggaaa
agcaggactggggccttgggaccctctaaaggcccgttggaaaagcggccctgtcctggc
caaactctgatccttgcaacccatgacagggccagcagcactcagggtggaggtgaggac
agctccagtggaggaggcaagaagccaaagacagaggagctgggactggcctcccagccc
cctgaaggccggccctgccagccccagacaagggcacagaagcagccaggtcaagccagc
tatagcagctattcaaagcggaagcgcctcagccgtggccgggctaagaccacccatgct
tcaccctgtaagggacgtgccacccggagacggcagcagcaggtactgcccctggatcct
gcagagcctgaaatccgactcaaatacatttcctcttgtaaacggctgagggcagacagc
cgcaccccagccttctcgccctttgtgcgggtggagaagcgagacgcatacaccaccatt
tgcactgttgtcaactccccaggggatgagcccaagcctcactggaagccatcctcctct
gctgcctcctcctcctccttagaaccagctggggcctctctgaccgcgttccctggaggc
cctgtgctgcagcccaggccctccctgcccctctcctccaccatgcatctggggcctgtg
gtatccaaggccctaagtacctcttgccttgtctgctgcctctgccaaaacccggccaac
ttcaaggaccttggggacctctgtggcccctactaccctgaacactgcctccccaaaaag
aaaccaaaactcaaggagaaggtgcggctggagggcacctttgaggaggcctctctgcct
cttgagagaacattgaaaggcctggaatgtgcagccagcaccatcaccaccatcaccacc
accacaaccctggggaggctgtccaggcctgatggcccagctgaccccgccaagcagggc
tccctgcgcaccagtgcccggggcctgtcgcggcggctgcagagttgctattgctgtgat
ggtcagggggacgggggtgaggaggtggccccagctgacaagagccgtaaacatgaatgc
agcaaagaggcccctgcagagcctggtggggacacccaggaacactgggtacatgaggcc
tgtgctgtgtggaccagcggggtgtacctggtggccgggaagctctttgggctgcaggag
gccatgaaggtagctgtggacatgccatgttccagctgtcatgaagccggggcgaccatc
tcgtgctcctataaaggatgtatccacacctatcactacccttgtgccaatgacacaggt
tgtacattcattgaggagaattttactttgaagtgccccaaacataagaggctgccgttg
taa
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