Cricetulus griseus (Chinese hamster): 100768306
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Entry
100768306 CDS
T02813
Symbol
Ciita
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge04612
Antigen processing and presentation
cge05145
Toxoplasmosis
cge05152
Tuberculosis
cge05164
Influenza A
cge05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
100768306 (Ciita)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100768306 (Ciita)
09171 Infectious disease: bacterial
05152 Tuberculosis
100768306 (Ciita)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
100768306 (Ciita)
09163 Immune disease
05340 Primary immunodeficiency
100768306 (Ciita)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cge01001
]
100768306 (Ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cge04054
]
100768306 (Ciita)
Enzymes [BR:
cge01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
100768306 (Ciita)
Protein kinases [BR:
cge01001
]
Serine/threonine kinases: Other
TAF1 family
100768306 (Ciita)
Pattern recognition receptors [BR:
cge04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
100768306 (Ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_14
LRR_8
AAA_16
Motif
Other DBs
NCBI-GeneID:
100768306
NCBI-ProteinID:
XP_035303838
UniProt:
A0A9J7H4T9
LinkDB
All DBs
Position
7:complement(36270914..36320078)
Genome browser
AA seq
1153 aa
AA seq
DB search
MNHFEAILAQVRTLLSSQQPRQVQALLDGLLEEELLSREYHCALLHEPDGEALARKISLT
LLEKEDLGLAYSSWVCSRLQAPAVERATSYRDHGGHSLCATMELGLPEGSYLELLNSNAD
PLHLYHLSDNMDLPGEEETELTSEPDTDTINCDQFSKLLQDMEGDEETREAYANIAELDQ
YVFQDTQLEGLSKDLFIDHIGTEECFSENMEVPVEAGQRPPKRRSLEEHPTDPKHRKLVP
PSRSSLNCLDLPVGHIQLLPTLPQGLWQISGAGTGLPSVLIYHGEMSQVNHTVPSGSPTV
SSLPKSPDRPCSTSPFAPSAADLPSMPEPALTSRVNEAEDTTSLSPCQEGPESSIKLPKW
PESVERFQHSLKDKYQVEPENLSSPLVAVELVRARLERGSNKSQERELATPDWTERQLAH
GGLAEVLQAVVDRRRPRETQVVAVLGKAGQGKSHWAQTVSQAWARGQLPQYDFVFYVPCH
CLDHPGDTYHLQDLLCPPSLQPLVMDDEVLGHIVRQPDRVLLILDAFEELEAQDGLLHGP
CGPLPPEPCSFRGLLAGLFQRKLLRGCTLLLTARPRGRLTQSLSKADAIFEVPSFSTKQA
QTYMRHYFENSGTVGDKDKALGLLEGQPFLLTHSHSPVLCRAVCQLSKALLEQGTETQLP
CTLTGLYVGLLGPAVRDSPPGALAELAKLAWELGRRHQSILQETQLLSVEVRTWAVTQGL
VQPTLGTTETHLAFSSFLLQCFLGAVWLAQCNEIRDKELPQYLALTPRKKRPYDNWLEGV
PRFLTGLVFQPQAHCLGTLVEPAVVDRKRKVLTRYLKRLQLGTLRAGRLLELLHCAHETQ
EPGIWEHVVHQLPGHLSFLGTRLTPPDVHILARALETASQDFSLDLRQTGIEPSGLGNLV
GLSCVTSFRAALSDTMVLWESLRHQGEPQLLQAAEEKFTIEPFKAKSPKDVEDLDSLVQT
QRLRNPLEDEALDLPAIRHLKKLEFALGPVLGPQAFPTLVKILPAFSSLQHLDLDSLSEN
KIGDEGVSKLSATFTQLKVLETLNLSQNSITDVGACKLAEALPALAKSLLRLSLYNNCIC
DVGAKSLAQVLPDMVSLRVMDVQFNKFTAAGAQQLASSLQKCPQVETLAMWTPTIPFGVQ
EHLQHLDARISLR
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacttcgaggccattctggctcaggtacggactctgctctccagccagcagccc
aggcaggttcaggccctcctggatggcctgttggaagaagagctgctctcccgggaatac
cactgtgccctgctccatgagcctgatggtgaggctctggctcgaaagatttccttgacc
ctgctggagaaagaggacttaggcttggcttactccagctgggtctgcagcaggctgcag
gccccagcagtagagagggccaccagctacagggatcatggaggccatagtctgtgtgcc
accatggaactggggcttcctgagggcagctacctggagctacttaacagcaatgccgac
cccctacatctctaccacttatctgacaatatggacctgcctggggaggaggagacggag
ctcacctcagagccggacacagacaccatcaactgtgaccagttcagcaagctgttgcag
gacatggaaggggatgaagagacccgggaggcctatgccaacatcgcggagctggatcag
tacgtgttccaggacacccagctggagggcctcagcaaggacctcttcatagaccacatt
ggaacagaggaatgtttcagtgagaacatggaggtccctgtagaagcaggacagaggcca
ccgaagagacgttccctagaagagcaccctacggacccaaagcacaggaagcttgtgccc
ccctctagatcctcactgaactgtttggatctccccgttggacacatccagctccttccc
actctgccccagggactctggcaaatctcaggagctggcacaggactccccagtgttctg
atctaccatggtgagatgtcccaggtcaaccacacagtcccttcaggcagccctactgtc
tccagcctccccaaatccccagaccgaccctgctccaccagcccctttgcaccatctgca
gctgacctgcccagcatgcccgagcctgcgctgacctcccgtgtaaatgaggctgaggac
acaacatccctctccccatgccaagagggtcctgagtcttccatcaagcttccgaaatgg
ccagagtctgtggagcggttccagcactccctgaaggacaagtaccaggtggagcctgag
aacctgagcagtcccctggtagccgtggagctggtgcgggccaggttggagagaggcagc
aacaagagccaggaaagagagctagccactccagactggacagagcgccagctagcccat
ggtggcctggctgaggtgcttcaggctgttgttgatcgccggcggccacgagagacacag
gtggttgctgtgctgggcaaggctggccagggcaagagccactgggcccagacggtgagt
caggcctgggcccgtggccagctgccacaatatgactttgtcttctatgtcccttgtcac
tgcttggatcacccaggggacacctaccacctgcaggatctgctctgtcccccaagcctg
cagccactggtcatggatgacgaggtcttaggtcacattgtgaggcaaccagaccgggtc
ctgctcattctagatgcttttgaggagctggaggcccaagatggcctcctgcatggacca
tgtggacctctgcccccagagccctgctcctttcggggactgctggctgggcttttccag
cggaagctgctgcgcggctgtaccctgctcctcacagcccggccccggggccgcctgact
cagagcctgagcaaggcagatgccatctttgaggtgcccagcttctctactaagcaggcg
cagacttacatgagacactactttgaaaactcagggacagtgggggacaaagacaaggcc
ctgggcctcctggagggccaaccttttctcctcacccatagtcacagtcctgttctgtgc
agagccgtgtgccagctctccaaggccctgctggaacagggcacagagacccagctgcct
tgcacacttacaggactctatgttggcctgctaggccctgcagtccgagacagtcctcca
ggggccttagctgagctggccaagctggcctgggagctgggccgcagacaccaaagtatc
ttgcaagagacccagttactatcagtggaggtgaggacctgggctgtgacccaaggcttg
gtgcagcccaccctgggcactacagagacccatctggccttctccagttttctgctacag
tgtttcctgggtgctgtatggctggcacagtgcaatgaaatcagagacaaggagctgcca
cagtacttggccttgaccccaaggaaaaagagaccctatgacaactggctggagggtgta
ccacgctttctgactgggttggttttccagcctcaagctcactgcctgggaactctggtg
gagcctgcagtggtagacagaaaacggaaggttcttaccaggtacctgaagcgcctgcag
ctggggacactgcgggcagggcgactactggagctcctgcattgtgcccatgagacacag
gaacctgggatttgggagcatgtggtacaccagctccctgggcacctctccttcctgggc
acccggctcacacccccagatgtgcacatactggccagggccctagagacagcaagccaa
gacttctccctggaccttcgtcagactggcattgagccttctggactggggaacctcgtg
ggactcagctgtgtcaccagtttcagggccgccttgagtgacacaatggtgctatgggag
tccctacggcatcagggagagccccagttactccaggcggcagaggagaagttcaccatt
gagccattcaaggccaagtctccaaaggatgtggaagacctggacagccttgtacaaacc
cagaggctaagaaaccccttggaggatgaagctctggatcttcctgccatccggcacctt
aagaagctagagtttgcgttgggcccagtcctgggcccccaggctttccccacactggta
aagatccttccggcattttcatcccttcagcacctggacctggactcacttagtgagaac
aagatcggggacgagggtgtgtcgaagctctcagccacctttactcagctcaaggtcctg
gagacactcaacctgtcccagaacagcatcactgatgtgggtgcctgcaagcttgcagaa
gccctgccggccctggccaagtccctcctaaggttgagcttgtacaataactgcatctgt
gacgtgggagccaagagcctggcacaagtgcttcctgacatggtgtctctgcgggtgatg
gatgtccagttcaacaagttcacagctgccggtgcccagcagctggcctccagccttcag
aagtgccctcaagtggaaacattggcaatgtggacacccactatcccctttggggttcag
gaacacttgcagcatctggatgcccgtatcagcctgagatga
DBGET
integrated database retrieval system
