Cricetulus griseus (Chinese hamster): 100768812
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Entry
100768812 CDS
T02813
Symbol
Ddx5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03040
Spliceosome
cge05202
Transcriptional misregulation in cancer
cge05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100768812 (Ddx5)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100768812 (Ddx5)
05205 Proteoglycans in cancer
100768812 (Ddx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cge03041
]
100768812 (Ddx5)
03009 Ribosome biogenesis [BR:
cge03009
]
100768812 (Ddx5)
Enzymes [BR:
cge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100768812 (Ddx5)
Spliceosome [BR:
cge03041
]
Complex A
U1 snRNP components
U1 related factors
100768812 (Ddx5)
Complex B
100768812 (Ddx5)
Ribosome biogenesis [BR:
cge03009
]
Eukaryotic type
Pre-60S particles
Helicases
100768812 (Ddx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
ERCC3_RAD25_C
Cas3-like_C_2
BNIP2
Motif
Other DBs
NCBI-GeneID:
100768812
NCBI-ProteinID:
XP_027283595
UniProt:
G3HCT4
LinkDB
All DBs
Position
7:complement(119727484..119735069)
Genome browser
AA seq
615 aa
AA seq
DB search
MSSYSSDRDRGRDRGFGAPRFGGSRTGPLSGKKFGNPGEKLVKKKWNLDELPKFEKNFYQ
EHPDLARRTAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI
QAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELA
QQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLR
RTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHI
NIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRK
MRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGS
GRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGYSSLLKRDFGAKTQNGVYSAANY
TNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGSNVANMHNGMNQQAYAYPATAA
AAPMIGYPMPTGYSQ
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagttactccagcgaccgagaccgcggccgggatcgaggatttggtgcaccaaga
ttcggagggagcagaacaggacccctctctggaaagaagtttggaaatcctggggagaaa
ctagttaaaaagaagtggaatctggatgagctgcccaaatttgagaagaatttttatcag
gaacaccctgatttggcaagacgcaccgcacaagaggtagatacatacagaagaagcaag
gaaattacagttcggggtcacaactgtccaaagcctgttctgaatttttatgaagcaaac
ttccctgcaaatgtcatggatgtgattgcaaggcagaatttcactgaacccactgctatt
caagctcagggctggccagttgctctaagtggattggatatggttggagtagctcagact
ggatctgggaaaacattatcttatttgctgcctgccattgtccacataaatcatcagcca
ttcctagagaggggtgatgggcctatttgcttggtgctggcaccaacacgggaactggcc
cagcaagtgcagcaagttgctgctgaatactgtagagcctgtcgcttgaagtctacctgc
atctatgggggtgctcccaagggaccacagattcgtgatttggaaagaggtgtggaaatc
tgtattgcaacacctggaagactgattgactttttagagtgtgggaaaaccaacctgaga
agaacaacttaccttgtcctcgatgaagctgatagaatgcttgatatgggatttgaaccc
caaatacggaaaattgtggatcaaataagacctgataggcaaaccctaatgtggagtgca
acttggccaaaagaagtaagacagcttgctgaagatttcctgaaagactatattcatatc
aatattggtgcactagaactgagtgcaaaccataacattcttcagattgtggatgtgtgt
catgatgtagaaaaggatgaaaagcttattcgtctaatggaagagatcatgagtgagaag
gagaataaaaccattgtttttgttgaaaccaaaagaagatgtgatgaacttaccagaaaa
atgaggagagatgggtggcctgccatgggcatccacggtgacaagagtcaacaggaacgt
gactgggttctaaatgaattcaaacacggaaaagctcctattctgattgctaccgatgtg
gcctccagagggctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaac
tcctcagaggattatattcatcgaattggaagaactgctcgcagtaccaaaacgggcaca
gcatacactttctttacacctaataacataaagcaagtgagcgaccttatctctgtgctt
cgggaggctaatcaagcaattaatcccaaattgcttcagttggtcgaagacagaggttca
ggtcgttccaggggtagaggaggcatgaaggatgatcgtcgtgacagatactctgcgggc
aaaaggggtggatttaatacctttagagacagggaaaattatgacagaggttactctagt
ctgcttaagagagattttggggctaaaactcagaatggtgtttacagtgctgcaaattac
accaatgggagctttggaagtaattttgtatctgctggtattcagaccagttttaggact
ggtaatccaacagggacttaccagaacggttatgatagcactcagcaatatggaagtaat
gttgcaaatatgcacaatggtatgaaccaacaggcatatgcatatcctgctaccgcagct
gctgcgcctatgattggctatccaatgccaacagggtattctcaataa
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integrated database retrieval system
