Cricetulus griseus (Chinese hamster): 100768851 Help Entry 100768851         CDS       T02813                                  Symbol Skiv2l Name (RefSeq) helicase SKI2W isoform X3   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism cge  Cricetulus griseus (Chinese hamster) Pathway cge03018   RNA degradation Brite KEGG Orthology (KO) [BR:cge00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     100768851 (Skiv2l)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cge03019]     100768851 (Skiv2l) Enzymes [BR:cge01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      100768851 (Skiv2l) Messenger RNA biogenesis [BR:cge03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      100768851 (Skiv2l)   mRNA degradation factors    3'-5' decay     Ski complex      100768851 (Skiv2l) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DSHCT Ski2_N MTR4_beta-barrel DEAD MTR4-like_stalk DEXQc_Suv3 Helicase_C ResIII DUF3516 Motif Other DBs NCBI-GeneID:  100768851 NCBI-ProteinID:  XP_027244588 UniProt:  A0A3L7ILF9 LinkDB All DBs Position 1 Genome browser AA seq 1244 aa AA seqDB search MMETERLVLPPPDPLNLPLRALEVGCTGRWELLSEPGAAESTLPHGLPPCAPDLQQEAEQ LFLSSPAWLPLHGVEHSARKWQRKRDPWSLLAAVGAPVPSDLQAQRHPTTGQILGYKEVL LENTNLSATTSLSLRRPPGPASQSLWGNPTQYPFWPGGMDEPTLTDLSTREEAEEEIDFE KDLLTVPPGFKKGVDFAPKDHQAPAPGLLSLSRLLEPLDLGGGDEDESEAAGAPPGDTVP ASPCSTPLGRASSLEDLVLKEASSTVSLLEPPKPAAQEQWAVPVDVTSPVGDFYRLIPQP AFQWSFEPDVFQKQAILHLEQHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIK ALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFD EVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVAR PVPLEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEAKKERMSKHAQTFGAKQPTH QGGPAQDRGVYLSLLASLRARAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEVHLF LQRCLARLRGSDRQLPQVLHMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATE TFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRV PEMADLHRMMMGKPSQLQSQFRLTYTMILNLLRVDALRVEDMMKRSFSEFPSRKDSKAHE QALAELTKRLGALEEPDVTGQLADLPDYYSWGEELTETRNMIQWRIMESVNGLKSLSTGR VVVVKNKEHHNALGVILQVSSNSTSRVFTTLVLCDKPVVSESPRDKGPATPDVPQPDDLV GFKLFLPEGPCEHTVAKLQPGDVAAISTKVLRVNGEKIVEDFTKRQQPKFRKDPPLAAVT TAVQELLRLAQAHPSGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIRGAQCVHSPRFPA QYLKLRERMQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVKLAGRVAC AMSSHELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDPGDQLPSTLKQGVERVKAVA KRIGEVQVACGLNQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQR LAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLYTQ NT seq 3735 nt NT seq  +upstreamnt  +downstreamnt atgatggagactgagagactcgtgctgcctcccccggatcccttgaacctgccccttcga gctctggaagtggggtgcacggggcgctgggagctgctgagcgagcccggggctgcagag agcacccttccgcacggcctccctccctgtgccccagacctacagcaagaagcagagcag ttatttctgtcgtctcctgcctggcttcctctgcatggtgtggagcactcagctcgaaaa tggcagaggaagagggacccatggtctctcctggctgctgtgggggcccctgtcccatcc gaccttcaggcccagagacacccaaccacaggccagatactgggctacaaggaggtcctg ctggagaacacaaatctgtcggccacaacctccttgtcccttcgccggcctccagggcca gcctcccagtcactgtggggcaatccaacacagtaccctttctggccaggtgggatggac gagcccaccctaacagatctgagcactcgggaggaagctgaggaggagatagactttgag aaagatcttctcaccgtcccacctggcttcaagaaaggggtggattttgcccccaaggat caccaagctcctgcgccagggttgctcagcctcagccgtctgctggagcctctagacttg ggtggaggcgacgaggacgagagcgaggcagccggagctcctccaggggacactgttcca gcctctccctgcagtactcccctgggccgagcaagcagtctggaggatctagtattgaag gaggcatcctcaaccgtgtccctgctggagcctcccaagcctgcagctcaggaacagtgg gctgtacctgtggatgtcacctcccccgtgggtgacttttaccgtctcatccctcagccc gccttccagtggtcctttgagccagacgtgtttcagaagcaggccatcctgcatctggag cagcacgactccgtcttcgttgcagctcacacgtccgccgggaagacggtggtggctgaa tacgccattgccctggcccagaaacacatgacccgcaccatctacacttctcccatcaaa gccctgagcaaccagaagtttcgggacttccgaaacacattcggggacgtggggctgctc acgggggacgtgcagctgcacccagaggcctcctgcctcatcatgaccacagagattctt cgctccatgctgtacagcggctccgacgtcatccgggatctcgagtgggtcatctttgat gaagtccactatatcaacgatgccgagcgtggggtcgtgtgggaggaggtactcatcatg cttcccgaccacgtctccatcatccttctgagtgccaccgtccccaacgccctggagttt gctgactggattgggcggctgaagcggcggcagatctatgtgatcagcacggttgcccgt cccgtccccctggaacactatctcttcacgggaaacagccccaagacgcagggggagctc ttcctgctgctggactcccgaggggccttccacaccaaggggtactatgccgcagtggag gccaagaaggagaggatgagcaagcatgcccagacctttggggccaaacagcccacgcac cagggaggacctgcacaggaccgtggagtgtacctgtccttgctggcttccctccgggcc cgggctcagctgcctgtggtagtcttcacgttttcccgaggccgctgtgacgagcaggct tcgggcctcacctctcttgacctcaccaccagctcggagaagagtgaggtccacctcttt ctgcagcgctgccttgcacgactccgcggctctgaccggcagctaccccaggtcctgcac atgtcagagctcctccgccggggcctgggtgtgcaccacagcggcatcctgcccatcctt aaggagatcgtggagatgctgttcagccgagggctggtcaaggtcttatttgctactgag accttcgccatgggggtaaacatgccagccaggacagtggtatttgactccatgcgcaaa cacgatggctctaccttccgggacctgctgcctggggagtatgtacagatggcaggccgg gcgggccggaggggcctggaccccacaggcaccgtcatcctgctctgtaagggccgagtg cctgagatggcagacctacaccgcatgatgatgggaaaaccgtcccagcttcagtcccag ttccgcctcacatacaccatgatcctcaacctgctgcgggtggatgccctcagggtggag gacatgatgaagaggagcttctcggagtttccatcccgcaaggacagcaaggcccatgag caggcgctggctgaactcaccaagcggctgggggccttggaggagcccgacgtgactggc caactggccgacctgcctgattattacagctggggggaggagctgacggagacgcggaac atgatccagtggcgcatcatggagtcagtgaatgggctgaaatccctgtccacgggaagg gtggtagttgtgaagaacaaggagcatcacaatgccttgggggtgatcctgcaggtctcc tcaaactccaccagcagagtgtttacaacactggtcttgtgcgacaagccggttgtgtct gagagcccacgggacaaggggccagccactccagatgtgccccagccagatgaccttgtg ggcttcaagctgttcctgccggaagggccctgtgagcacactgtggccaagctacagcca ggagatgtggctgccatctccaccaaagtgctccgggtgaacggggagaagatcgttgag gacttcaccaagaggcagcaaccaaagttcaggaaggaccctccccttgcagctgtgacc actgccgttcaggagctgctgcgtctggctcaggcccatccatcaggacccccaaccctt gaccctgtcaacgacctgcagctcaaggatgtgtcagtggtagaaggtgggctccgggcc cggaagctggaggagctgatccggggggctcagtgtgtgcacagcccccggttccctgcc cagtacctgaagcttcgggagcgaatgcagatccagaaggaaatggagaggctgcgcttc ctgctgtccgaccagtcactgttgctgctccccgaataccaccagcgtgtagaggtgctc cggaccctgggctatgtggatgaggcgggcacagtgaagctggcggggcgagtggcctgc gccatgagcagccatgagctgctcctcactgagctcatgtttgataatgcactgagcacc ctgcgacccgaggagattgcagccctgctctctggcctggtctgccagagccctggcgac cctggggatcagctcccgagcaccctcaaacagggggtagagcgcgtcaaagctgtggcg aagcggattggtgaggttcaggtggcctgtggcctgaaccagacagtggaagaatttgtg ggagagctgaattttgggctggtggaggttgtgtacgagtgggctcggggtatgcccttc tccgagttggcaggactctcagggacccctgaaggcttggtggtccgctgcatccagcgc ctggctgagatgtgccgctcgcttcgaggcgccgcccgtttggtgggagagcctgtgctg ggtgccaagatggagacagcggccaccttgctacggcgggacattgtctttgcagccagc ctctacacccagtaa

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