Cricetulus griseus (Chinese hamster): 100769458
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Entry
100769458 CDS
T02813
Symbol
Pdcd6ip
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03250
Viral life cycle - HIV-1
cge03272
Virion - Hepatitis viruses
cge04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100769458 (Pdcd6ip)
03272 Virion - Hepatitis viruses
100769458 (Pdcd6ip)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100769458 (Pdcd6ip)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cge04131
]
100769458 (Pdcd6ip)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cge04147
]
100769458 (Pdcd6ip)
Membrane trafficking [BR:
cge04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
100769458 (Pdcd6ip)
Exosome [BR:
cge04147
]
Exosomal proteins
Proteins found in most exosomes
100769458 (Pdcd6ip)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
CCDC93_N
AAT
Ly49
Motif
Other DBs
NCBI-GeneID:
100769458
NCBI-ProteinID:
XP_027271071
UniProt:
A0A9J7FXQ8
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Position
4
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AA seq
872 aa
AA seq
DB search
MSSFIWVQLKKTSEVDLAKPLVKFIQQTYPSGGEEQAQYCRAAEELSKLRRTALGRPLDK
HEGSLETLLRYYDQICSIEPKFPFSENQICLTFTWKDAFDKGSLFGGSVKLALASLGYEK
SCVLFNCAALASQIAAEQNLDNDEGLKTAAKQYQFASGAFLHIKDTVLSALSREPTVDIS
PETVGTLSLIMLAQAQEVFFLKATRDKMKDAIIAKLANQAADYFGDAFKQCQYKDTLPKY
FYFQEVFPTLAAKQCIMQANAEYHQSILAKQQKKFGEEIARLQHAAELIKNVASRYDEYV
NVKDFSDKISRALTAAKKDNDFIYHDRVPDLKDLDPIGKATLVKPTPVNVPISQKFSDLF
EKMVPVSVQQSLAVFGQRKADLVNRSIAQMREATTLANGVLASLNLPAAIEDVSGDTVPQ
SILTKSTSVVEQGGIQTVDQLIKELPELLQRNREILEESLRLLDEEEATDNDLRSKFKER
WQRTASNDLYKPLRAEGSKFRAVLDKAVQADGNVKERYQSHRDTIALLCKPEPELNAAIP
SANPAKTMQGSEVVNVLKSLLSSLDELKKEREGLENDLKSVNFDMTSKFLTALAQDGVIN
EEALSVTELDRIYGGLTAKVQESLKKQEELLKNIQVSHQEFSKMKQSNNEANLREEVLKN
LATAYDNFVELVANLKEGTKFYNELTEILVRFQNKCSDIVFARKTERDELLKDLQQSIAR
EPSAPSIPPPAYQASPAGGHATAPPTPAPRTMPPAKPQPPARPPPPVLPANRVTPAAAAP
TGAGVASPAPTQTPGSAPPPQAQGPPYPTYPGYPGYCQMPMPMGYNPYAYGQYNMPYTPV
YHQSPGQAPYPGPQQPAYPFPQPPQQSYYPQQ
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgttcatctgggtgcagctgaagaagacgtcggaggtggacctggccaagccg
ctggtgaagttcatccagcagacgtacccgagcggcggcgaggagcaggcccagtactgc
cgtgcggccgaggagctgagcaagctgcggcgcacggcgctcggccgcccgctggacaag
cacgagggctcgctggagacgctgctgagatattatgatcagatttgttccattgaaccc
aagttcccattttctgaaaatcagatctgcttgacatttacgtggaaggatgcttttgat
aaaggttccctttttggaggatctgtaaaattggctcttgcaagcttaggatatgaaaag
agctgtgtgttgttcaattgtgctgccttagctagccagattgcagcagagcagaacctg
gataatgacgaaggattgaaaacggctgctaagcagtaccagtttgctagtggtgccttt
ttacatattaaagacacagttttatctgccttaagtcgagagcctactgtggacatatct
ccagagactgttgggaccctcagtcttattatgctggcccaagctcaagaagtatttttc
ttaaaagccacaagagataaaatgaaagatgccattatagctaagctggcaaaccaggct
gcagattactttggcgatgctttcaagcagtgtcagtacaaagacactctccccaagtat
ttttatttccaggaggtatttcccaccctggctgcaaagcagtgtatcatgcaagccaat
gctgagtaccaccagtctatcctggccaagcagcagaagaagtttggggaagagatcgca
aggttgcagcacgcagcagaactgattaagaatgtggcctctcgctatgatgagtatgtc
aatgtgaaggatttttctgacaagatcagccgtgcccttactgcagcaaagaaggataac
gatttcatttatcacgaccgcgtcccagaccttaaagatctggatcctatcggcaaagcc
acccttgtgaaacccaccccagtcaatgtacccatcagccagaagttctcagatttgttt
gagaagatggtccctgtgtctgtgcagcagtccctggctgtgtttggtcagaggaaagct
gacttggttaacagatcaatcgctcaaatgagagaagccactactttggcaaatggggta
ttggcttccctcaaccttccagcagccattgaagatgtgtctggagacactgtgcctcag
tctatcctaaccaagtccacttctgtagttgaacagggtggcatccagactgttgaccag
ctgataaaggagctacccgagttactacaaagaaatagagaaatcttagaagagtctttg
agacttctggatgaagaagaagcaactgacaatgacttaagatcaaaattcaaggaacga
tggcaaaggactgcatccaatgacctctacaagcctttacgagcagagggatccaaattc
agagcagttttagataaagctgtgcaagcagacggaaatgtgaaagagcgctaccagtcc
catcgagacaccatcgcacttctgtgtaagccggaacctgagctgaatgcggccatcccc
tctgcaaacccagcaaagaccatgcagggcagcgaggttgtaaatgtcttaaaatcctta
ttatcaagtcttgatgaactaaagaaggaaagagagggtcttgagaatgacctgaagtca
gtgaattttgacatgacaagcaagtttttgacagctctggcccaggatggcgtgataaat
gaggaggccctttctgtcactgagctggatcggatttatggtggtctaacagctaaagtt
caagagtctctgaagaaacaggaggaacttctaaaaaatatacaggtctcacaccaagaa
ttttctaaaatgaagcagtctaacaatgaagctaacctaagagaagaagttctgaagaac
ttggcaactgcatatgacaactttgttgaacttgtagctaacttgaaggagggcacaaag
ttttacaacgagctgactgaaatcttggtcaggttccagaacaaatgcagtgacatagtg
tttgcacggaagacagagagagatgagctcttgaaggatctgcagcagagcattgccaga
gaacccagcgctccttccatccctcctccagcatatcaggcctcaccagcaggggggcat
gccacagctcctccaactccagctccaagaaccatgccgcctgcgaagccccagcctcca
gcccggcctccacctcctgtgcttcctgcaaaccgagtcacccctgctgctgctgctccc
acaggggcaggggttgcttcaccagcaccaacacagacccctggctctgctccccctcca
caggctcagggaccaccgtatcctacctatccaggatatcctgggtattgtcagatgccc
atgcccatgggctacaacccctacgcatatggccagtacaacatgccgtacacgccagtg
taccaccagagcccaggacaggctccgtacccgggaccccagcagcctgcctaccccttc
cctcagcccccacagcagtcttactatccacagcagtaa
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