Cricetulus griseus (Chinese hamster): 100769875
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Entry
100769875 CDS
T02813
Symbol
Acin1
Name
(RefSeq) LOW QUALITY PROTEIN: apoptotic chromatin condensation inducer in the nucleus isoform X2
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03013
Nucleocytoplasmic transport
cge03015
mRNA surveillance pathway
cge03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100769875 (Acin1)
09122 Translation
03013 Nucleocytoplasmic transport
100769875 (Acin1)
03015 mRNA surveillance pathway
100769875 (Acin1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cge03019
]
100769875 (Acin1)
03041 Spliceosome [BR:
cge03041
]
100769875 (Acin1)
Messenger RNA biogenesis [BR:
cge03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100769875 (Acin1)
Spliceosome [BR:
cge03041
]
Complex C
Other components
EJC/TREX
100769875 (Acin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
100769875
NCBI-ProteinID:
XP_027246427
UniProt:
A0A9J7F2V6
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Position
1
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AA seq
1340 aa
AA seq
DB search
MWRRKRPNSSGGTRGILSSKRGVDYGSGRGQFGTFEGRXRKLPKMPEAVGTDPSTSRKMA
ELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKGALMLENLQKHSTPHAA
FQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEEASAESEDEMIHPEGVA
SLLPPDFQSSLERPELELSRHSPRKSSFSEEKGESDDEKPRKGERRSSRVRQARAAKLSE
YSQAAEEEEDQETPSRNLRVRVDRNLKMEEEEEEEEEDDDDEEEEEEVDEGQKSGEAEAP
VLKQFEDEEGEETLRAKPEKVVEEKPQVIASQEKDGLEKGGRVTRSQEEARRSHLAKQQQ
EKDTQEVSLLQEANEGKSSQSLEERSQSPSPPSLSEDLEKAPVVVQPEQIVSEEETPPPL
LTKEASSPPTHIQLQDEEEIEPVEGPAPPVLIQLSPRNTDPESRELVTSPHPVQLVRGLS
PLSSTLDTKAESPAERMSDESALPLAQKSIPSEYSAQKGLETEPEKSAHSLPPKVEELAP
TKGTTEEPVKKQSLEQKEGRRASHTLFPDHSLKQSADSSSSRSSSPSSSSSRSRSRSPDS
SASHPQSSPRSKQKDVSQARVHTNPHGRPKMDSRSTSESRSQSRSRSRSASSSSRKSLSP
GVSRDSNTSYTETKDPSCGQEAAVPPVPQLQVLEPKEKTPTSSAPVRGRHLSQTEPEQKH
VIQRLQPEQGSPKKCEAGEAEPPAATQPQTSETQISHLPESERIHHTVEEKEEVTMDTTE
NRPENEVPEPPVPTADQVSNDDRPEGSAEEEEKKESSMPKSFKRKISVVSATKGVQAGNS
DTEGGQPGRKRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEAVVDLHADDSRIS
EDETERNGEDGTHDKGLKICRTVTQVVPAEGQENGQREEEEEKEPEAEPPVPPQVSVEVA
LPPPVEHEVKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKISNIVHISNL
VRPFTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHGVKWPQSNP
KFLCADYAEQDELDYHRGLLVDRPSETKTEEQGAPRPLHPPPPPPVQPPPHPRAEQREQE
RAVREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKK
EKAQEEPPAKLLDDLFRKTKAAPCIYWLPLTESQIVQKEAEQAERAKEREKRRKEREEEE
QKEREKEAERERNRQLEREKRREHSRERERDRERERDRGDRDRDRERDRDRGRERDRRDT
KRHSRSRSRSTPVRDRGGRR
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atgtggagacggaaacggccgaacagttccggaggaacccggggaattctgagcagtaag
agaggggtagactatggcagtgggcggggccaattcggtacgttcgaagggcgttagcgg
aaattaccgaagatgcccgaagccgtcgggacggacccgagtacctcacgcaagatggcg
gagctggaggaggtgactctggacgggaagcctcttcaggctctgcgggtgaccgacctg
aaggccgcactggagcagcgaggcctagccaagagcgggcagaagagtgctctggtcaag
cggctcaaaggggctctaatgctagaaaatttacagaaacactcaacaccccatgctgca
ttccagccaaattcacagattggggaggaaatgagccagaacagtttcataaagcagtat
ctggagaagcagcaggagctcctgaggcagcggctagaacgtgaagctcgagaggctgca
gaacttgaagaagcttcagctgagtcggaggacgagatgatccatcctgagggagtggct
tccctgctgcctcctgactttcagagcagcttggagagaccagagctggagctcagcaga
cattcacccagaaagagctctttttctgaagaaaaaggtgaatctgatgatgagaagccg
aggaaaggagaaagacgatcgtccagggttagacaggcaagagcagctaaactttctgag
tacagccaggctgctgaggaggaagaggatcaagaaacaccatctagaaacctgagggtc
agagtagatcgaaatttaaaaatggaggaggaagaagaagaagaggaagaagatgatgat
gatgaagaagaggaggaagaggtagatgagggacaaaaatctggagaagcagaggcgcca
gtcctgaaacagtttgaggatgaagaaggggaagagacactcagagcaaaaccagaaaag
gtggtagaggagaaaccccaagtcatagcatcccaggaaaaggatgggttagagaaagga
gggcgagttacaagatcccaggaagaagctagaagaagtcacctggccaaacagcagcaa
gagaaagacacacaagaagtttctctccttcaggaggcaaatgaaggaaagtcttcacaa
agcttggaggaaagatcacagtctccttccccaccttcactctctgaagacctagagaag
gcccctgttgtggtacagccagagcaaatagtcagtgaagaggaaactcccccaccttta
cttaccaaggaagcttcatctcctccaactcatatacaactccaggatgaggaagagata
gagccagtggaaggcccagcaccccctgtcctcattcagttatcgcctcgtaatacagat
cctgaaagtcgggagctggtgacgtctccgcatcctgtccagttagtaagggggctgtct
cctttgtcaagtactctagacaccaaagcagaatctccagcagagagaatgtcagatgag
agtgccctgcctctggctcagaaaagcataccgtctgaatactcagcccagaaaggtctt
gaaactgagcctgaaaaatctgctcactccctccctccaaaggtagaggaattagcaccc
accaaagggaccactgaggaacctgtgaaaaagcagtctttggaacagaaggagggcaga
agagcttcccacactcttttcccagaccatagtttgaaacagtcagccgattcttcctct
agccggtcctcctcaccttcatcctcgagctctagatccagatctcgctctcctgacagt
tcagcgtctcacccacagtcatctccaagatctaaacagaaagatgtatcccaagctcga
gttcacaccaaccctcatggtagacccaagatggactccaggtcaacatcagagtccagg
tcacagtcccgatcccgttcccgttcagcatcaagcagcagcagaaaatctctgagccct
ggagtctccagagacagcaacaccagctacactgaaaccaaagatccctcttgtggtcag
gaggctgcagttccaccagtgccacagctgcaggtccttgaaccaaaggagaagactccc
acgtcctcagcccctgtccggggaaggcatctgagccagactgagccagagcaaaagcat
gtgatccagaggttgcagcctgagcaggggagcccaaagaagtgtgaagctggagaggca
gagccaccagctgctacacagcctcaaacctcagagactcagatctctcatctccctgaa
tcagaacggattcatcacactgttgaagagaaggaggaagtgaccatggacacaactgaa
aacagaccagaaaacgaggttccagagcctcctgtgcctactgcagaccaagtcagcaat
gatgaccgcccagagggcagtgctgaagaagaggagaagaaagagagttcgatgcctaaa
tcattcaagaggaaaatctccgttgtctcagctaccaagggggtgcaagctggaaacagt
gacacagaggggggccagcctggtcgaaaacgacgttggggagccagcacagccaccaca
cagaagaaaccttccatcagtatcaccactgaatcactcaagagcctcatccccgacatc
aaacccctggcggggcaggaggctgttgtggatcttcatgctgatgactcccgaatctct
gaggatgagacagagcgtaatggcgaagatggaacgcacgacaaaggactgaaaatatgc
cggacagtcacacaggtagtacctgcagagggccaggagaatgggcagagggaagaggaa
gaagaaaaggaacctgaagcagagccgcctgtacctccccaggtgtcagtagaggtggcc
ttacccccacccgtggagcatgaagtaaagaaagtcacgttaggagataccttaacccgg
aggtccattagccagcagaagtctggagtttccattacaattgatgacccagtccggact
gcccaggtgccctccccacccaggggcaagatcagtaacattgtccatatttccaacttg
gttcgacccttcactttaggccaactgaaggaattactgggacggacaggaactttggta
gaagaggccttctggattgacaagatcaaatctcattgctttgtgacgtactcaacagta
gaggaggcggttgccacccgtacagctctgcatggggtcaagtggccccagtccaacccc
aaattcctctgtgctgactatgctgagcaagacgagctggactatcaccggggactcttg
gttgatcggccttctgaaactaagacagaggaacaaggagcaccaaggcccctacatccc
ccacccccacccccagttcagccaccaccccacccccgggcagagcaaagggagcaggaa
cgggctgttcgagagcaatgggcagaacgggaacgagaaatggaacgacgggagagaact
cgttctgaacgagaatgggatcgggacaaagttagagaggggccccgctcccgatcacgg
tcccgtgaccgccgccgcaaagagcgagcaaaatctaaagaaaagaagagtgagaagaaa
gaaaaagctcaagaggagccacctgccaagttgctggatgaccttttccgtaagactaag
gcagctccctgcatctactggctcccactgactgagagccagattgttcagaaggaggca
gagcaggctgaacgggccaaggaacgggagaagcggcgaaaggaacgagaagaagaagag
cagaaggagcgggagaaggaagctgagagggaacggaaccgacagctagaacgggagaag
cgaagagagcacagcagggagagggaaagggacagggagagggagagggacaggggggac
cgagatcgggatagggaaagagacagagaccgaggcagggagagggaccgcagagacacc
aagcgccacagcagaagccggagtcgaagcacacctgtacgggaccggggtgggcgccgc
tag
DBGET
integrated database retrieval system
