Cricetulus griseus (Chinese hamster): 100770376
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Entry
100770376 CDS
T02813
Symbol
Ddx54
Name
(RefSeq) ATP-dependent RNA helicase DDX54 isoform X1
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
cge
Cricetulus griseus (Chinese hamster)
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cge03009
]
100770376 (Ddx54)
Enzymes [BR:
cge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100770376 (Ddx54)
Ribosome biogenesis [BR:
cge03009
]
Eukaryotic type
Pre-60S particles
Helicases
100770376 (Ddx54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Motif
Other DBs
NCBI-GeneID:
100770376
NCBI-ProteinID:
XP_027269938
UniProt:
A0A9J7FYM8
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All DBs
Position
4:100425442..100441397
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AA seq
877 aa
AA seq
DB search
MAAGRRVGPGPRSRAAMAPWKKKGLRKRRTGASQARDSESEDGEFEIQAEDDARARKLGP
SRALPSFPTSECISDVEPDTRELVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTP
IQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFERLKARSAQTGARALILSPTRELALQ
TMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLMHVAVEMNLKLQSV
EYVVFDEADRLFEMGFAEQLQEIIGRLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRL
DVDTKLNEQLKTSFLLVREDTKAAVLLYLLRNVVRPQDQTVVFVATKHHAEYLMELLTAQ
GVSCAHIYSALDQTARKINLAKFTHNKCSTLIVTDLAARGLDIPLLDNVINYSFPAKGKL
FLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRSITLAQPHEEPSGAVGRDGVLG
RVPQTVVDDEDSGLQTALEASLDLRGLHRVADNAQQQYVRSRPAPSPESIKRAKELDLAG
LGLHPLFSSRFEEGERQRLRLLDSVKSYRTRTTIFEINASCRDPSSQMMRAKRQRDQKAI
DSFQQGRQERQESPADPVPQKELPQKEEGEEDMAESVEDVFTEVVGQKRSKPGPNRGAKR
RREEARQRDQEFYVPYRPKDFDSERGLSIGGTAGAFEQQVAGAVLDLMGDEAQNMSRGRQ
QLKWDRKKKRFVGQSGQEDKKKIKTESGRYISSSYKRDLYQKWKQKQKIDDRDSEDEGSF
NQRGPGPRRGGKRGRSQGGQGASLPRAPSAPTGRMRSELKTKEQILKHRRQAQKQRFLQR
GGLKQLSARNRRRAQELRQGAFGRGAPSRKGKMRKRM
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggctgccggcagacgcgtgggtcccggcccgcggtcgcgtgccgccatggcgccgtgg
aagaagaaggggctgcggaagcgccggactggtgcttcccaggctcgcgacagcgaatca
gaggacggcgagttcgagatccaggcggaggatgacgctcgggcgcggaagctgggcccc
agcagagccttgccctccttccctacctcggagtgcatatcagatgtggagcccgacact
cgggagttggtacgagcccagaacaagaaaaagaagaagtctggaggcttccagtccatg
ggcttgagctaccctgtgttcaaagggattatgaaaaagggctacaaggtgccaacgccc
atccagaggaagaccattccggtgatcttggatggcaaggacgtggtggccatggcccgg
acaggcagcggcaaaacagcatgcttcctcctcccgatgtttgagcggctgaaggcacga
agcgcacagaccggagcccgggccctcatcctctcgcccacccgggagctcgccctgcag
actatgaaattcactaaagagctgggcaagttcaccggcctcaagacagccttgatcctg
ggtggggacaaaatggaagaccagtttgctgccctgcacgagaaccctgacataatcatt
gccacccctgggcggttgatgcacgtggctgtggagatgaatttgaagctacagagtgtg
gagtatgtggtttttgatgaagcggacaggctctttgaaatggggtttgctgaacagcta
caggagatcataggccgccttcctggaggccaccaaacagtgctgttctcggccacactg
cccaaactgctggtggaatttgctcgggcaggtctcacagagcctgtgctcatccgtctg
gatgtagacaccaagctcaatgaacagctcaagacctccttcctccttgtgcgcgaggac
accaaggctgctgtgcttctctacctgctgcgtaatgttgttcggccccaggaccagacg
gtggtgtttgtagctacaaagcaccacgcagagtacctcatggagttgctgacagcccag
ggtgtgagctgcgcccacatctatagtgctttggaccagacagcccgtaaaatcaacttg
gcgaagttcacacacaataaatgttccaccctcatcgtgactgacctggccgcccggggc
ctggacatcccactgctggacaacgtcatcaactatagctttcctgccaagggcaagctc
ttcctgcatcgtgtgggtcgtgtggcccgagcaggccgaagtggcacagcctattccttg
gtggctccagatgaggttccctacctgcttgacctgcacctgttcctgggccgctccatc
accctcgcccagcctcatgaggaaccctcaggtgcagttggcagggatggcgtgctgggt
cgggtgcctcagactgtggtggatgacgaggacagtggcctgcagactgccctggaggcg
tcactggaccttcggggcctgcaccgtgtggccgacaacgctcagcagcagtatgtgcgc
tctcgtccagcgccctcacctgagtccatcaagagagccaaggagctggacctggcaggg
ctgggcttgcacccactcttcagctcccgctttgaggagggggaacggcagcgcctgagg
ctgctggacagcgtcaagagctaccgcacccgcacaaccatctttgagatcaacgcctcc
tgccgggacccaagcagccagatgatgcgtgccaagcggcagagggaccaaaaagctatc
gatagcttccagcaggggcggcaggagaggcaggagagcccagctgacccagtcccccaa
aaggagctgcctcagaaggaagagggagaggaggacatggctgagagtgtggaggatgtc
ttcacagaggttgtgggccagaagcggtcaaagccaggacccaaccgaggagccaagagg
cggagggaggaggctcgtcagcgagaccaggagttttatgtcccctaccggcccaaggat
tttgacagtgagcgggggctgagcatcggtgggaccgcaggggcctttgagcagcaggtg
gctggtgcggtccttgatctgatgggggatgaggcgcagaacatgagccgaggtcggcag
cagctcaagtgggaccggaagaagaagcggtttgtggggcaatcaggccaggaggacaag
aagaaaatcaagacagagagtggccggtatatcagcagctcctacaagcgtgacctctac
cagaagtggaagcagaagcagaaaattgatgaccgggactctgaggatgaaggatcattc
aaccagcgaggccctgggccccgcagaggtggaaagcgagggcggagtcaaggtgggcag
ggtgcctccctgccccgagcacccagtgcccccacaggccgtatgcgctcagaacttaag
accaaggaacagatcctgaaacatcgacgtcaggcccagaagcagcgcttcctgcagcgc
ggaggcctgaagcagctttcagcacgaaaccgtcgtagagcccaagagctgcgccagggt
gcctttggccggggtgccccctccaggaagggcaagatgaggaagaggatgtaa
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