Cricetulus griseus (Chinese hamster): 100770480
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Entry
100770480 CDS
T02813
Symbol
Nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03013
Nucleocytoplasmic transport
cge05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100770480 (Nup54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100770480 (Nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cge03019
]
100770480 (Nup54)
Messenger RNA biogenesis [BR:
cge03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100770480 (Nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
100770480
NCBI-ProteinID:
XP_027244215
UniProt:
A0A9J7F074
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All DBs
Position
1
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AA seq
509 aa
AA seq
DB search
MAFNFGAPSGTSGTSAATAAPAGGFGGFGTTTTTAGSAFSFSAPTNTGTTGLLGGTQNKG
FGFGTGFGTATGTGTGLGTGLGTGLGFGGFNTQPQQQQQTTLGGLFSQPTQAPAQSNQLI
NTASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGY
SCMPNNKDEDGLVVLVFNKKEADIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQT
EVVIYVVERSPNGTSRRVPATTLYAHFEQANIKTQLQQLGVTLSMTRTELSPAQIKQLLQ
NPPAGVDPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDI
SELQKNQTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQ
GELNAPTQFKGRLNELMSQIRMQNHFGAVKSEERYYIDADLLREIKQHLKQQQEGLSHLI
SIIKDDLEDIKLVEHGLNETIHTRGGVFC
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaattttggggctccttcgggcacttctggcacctctgcagctaccgccgca
cccgcgggtgggtttggaggatttggaacaacaactacaactgcaggctctgcattcagc
ttttctgccccaacaaacacaggcactacaggccttcttggtggcactcagaacaaaggt
tttggcttcggtactggttttggcacagcgacaggaactggcactggtttaggtactggt
ttgggcaccggcctgggatttggaggatttaatacacagccccagcagcagcagcaaact
actctaggcggtctcttcagtcagcctacacaggctcctgcccagtccaaccagctgatc
aatactgccagtgccctttctgctccaacgttattgggagatgagagagatgccattttg
gcaaagtggaaccagcttcaggctttctggggaacaggaaaaggctatttcaacaataat
attcctcccgtggagtttacacaggaaaaccccttttgccgatttaaggctgtaggttat
agttgtatgcccaataataaagatgaagatggactggtggtcttagttttcaacaaaaaa
gaagcagacattagaagccagcaacaacagttggtagaatcattacataaggttttggga
ggaaaccagacccttactgtcaatgtggagggcattaagacactgccagatgatcagaca
gaagttgtcatttatgttgttgagcgttctccaaatggcacctcgagaagggtcccagca
acaacactgtatgctcactttgagcaagctaacattaagacacagctgcagcagcttggg
gtgacactttctatgaccagaacagaactgtcccctgctcagatcaaacagctcttgcag
aaccctcctgcaggtgttgatcctattatttgggaacaagctaaggtggataaccccgat
tctgaaaaattaattcctgtaccgatggtgggtttcaaagaactgcttcgaagactgaag
gttcaagaccagatgactaagcagcatcagaccagattagatatcatatctgaagatatt
agtgaactacaaaagaatcaaactacaactatggccaaaatagcacaatacaagaggaag
ctcatggatctctcccacagaaccttacaggtcctaatcaaacaggagattcaaaggaag
agcggctacgccatccaggctgacgaagagcaactgcgggttcagctggacactatccag
ggggaactaaatgcacctactcagttcaaaggtcgactaaatgaactgatgtcccagatc
cggatgcagaatcactttggagctgtgaaatctgaagaaaggtattacatagatgcagac
ctgttacgggagatcaagcagcatttgaaacaacaacaggaaggcctcagccacctgatt
agcatcataaaagatgacctagaagatataaaactggtagaacatggattgaatgaaacc
atccatactagaggcggtgtcttttgctga
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