Cricetulus griseus (Chinese hamster): 100770495
Help
Entry
100770495 CDS
T02813
Symbol
Cacna1b
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X3
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge04010
MAPK signaling pathway
cge04020
Calcium signaling pathway
cge04721
Synaptic vesicle cycle
cge04723
Retrograde endocannabinoid signaling
cge04725
Cholinergic synapse
cge04726
Serotonergic synapse
cge04727
GABAergic synapse
cge04728
Dopaminergic synapse
cge04930
Type II diabetes mellitus
cge05016
Huntington disease
cge05020
Prion disease
cge05022
Pathways of neurodegeneration - multiple diseases
cge05032
Morphine addiction
cge05033
Nicotine addiction
cge05207
Chemical carcinogenesis - receptor activation
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100770495 (Cacna1b)
04020 Calcium signaling pathway
100770495 (Cacna1b)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
100770495 (Cacna1b)
04725 Cholinergic synapse
100770495 (Cacna1b)
04728 Dopaminergic synapse
100770495 (Cacna1b)
04726 Serotonergic synapse
100770495 (Cacna1b)
04723 Retrograde endocannabinoid signaling
100770495 (Cacna1b)
04721 Synaptic vesicle cycle
100770495 (Cacna1b)
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
100770495 (Cacna1b)
09164 Neurodegenerative disease
05016 Huntington disease
100770495 (Cacna1b)
05020 Prion disease
100770495 (Cacna1b)
05022 Pathways of neurodegeneration - multiple diseases
100770495 (Cacna1b)
09165 Substance dependence
05032 Morphine addiction
100770495 (Cacna1b)
05033 Nicotine addiction
100770495 (Cacna1b)
09167 Endocrine and metabolic disease
04930 Type II diabetes mellitus
100770495 (Cacna1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cge04040
]
100770495 (Cacna1b)
Ion channels [BR:
cge04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
100770495 (Cacna1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Ferlin_C
Motif
Other DBs
NCBI-GeneID:
100770495
NCBI-ProteinID:
XP_035302969
UniProt:
A0A9J7H4L8
LinkDB
All DBs
Position
6:complement(135942530..136100695)
Genome browser
AA seq
2235 aa
AA seq
DB search
MILATIIANCIVLALEQHLPDGDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHKG
SYLRNGWNVMDFVVVLTGILATAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKA
MVPLLQIGLLLFFAILMFAIIGLEFYMGKFHKACFPNSTDAEPVGDFPCGKEAPARLCEG
DTECREYWPGPNFGITNFDNILFAILTVFQCITMEGWTDILYNTNDAAGNTWNWLYFIPL
IIIGSFFMLNLVLGVLSGEFAKERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVM
LAEEDKNAEEKSPLDVLKRAATKKSRNDLIHAEEGEDRFVDLCAVGSPFARASLKSGKTE
SSSYFRRKEKMFRFFIRRMVKAQSFYWVVLCVVALNTLCVAMVHYNQPQRLTTALYFAEF
VFLGLFLTEMSLKMYGLGPRSYFRSSFNCFDFGVIVGSIFEVVWAAIKPGTSFGISVLRA
LRLLRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQD
ETPTTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVSKGMFSSFYFIVLTLFGNYT
LLNVFLAIAVDNLANAQELTKDEEEMEEAANQKLALQKAKEVAEVSPMSAANISIAARQQ
NSAKARSVWEQRASQLRLQNLRASCEALYSEMDPEERLRYASTRHVRPDMKTHMDRPLVV
EPGRDGLRGPVGNKAKPEGTEATENADPPRRHHRHRDRDKTSATAPAGGDQDRTDCPKTE
NTEAGAREERPRPRRSHSKEAAGAEVQARSERSERNRRHHRRGSPEEEATEREPRRHRAH
RHAQESGKEGTAPVLAPKGERRPRHRGPRTGPREAENSEEPTRRHRARHKGPPTLEPPER
EAAEKESNVAEGDKETRNHQPKEPHCDLETIAVTGVGPLHMLPSTCLQKVEEQPEDADNQ
RNVTRMGSQPSDPSTTVHVPVTLTGPPGETTVVPSGNVDLEGQAEGKKEAEADDVLRRGP
RPIVPYSSMFCLSPTNLLRRFCHYIVTMRYFEMVILVVIALSSIALAAEDPVRTDSSRNN
ALKYMDYIFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSGSKG
KDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAV
QLFKGKFFYCTDESKELERDCRGQYLDYEKEEVEAQPRQWKKYDFHYDNVLWALLTLFTV
STGEGWPMVLKHSVDATYEEQGPSPGFRMELSIFYVVYFVVFPFFFVNIFVALIIITFQE
QGDKVMSECSLEKNERACIDFAISAKPLTRYMPQNKQSFQYKTWTFVVSPPFEYFIMAMI
ALNTVVLMMKFYDAPYEYELMLKCLNIVFTSMFSMECILKIIAFGVLNYFRDAWNVFDFV
TVLGSITDILVTEIAETNNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPY
VCLLIAMLFFIYAIIGMQVFGNIALDDDTSINRHNNFRTFLQALMLLFRSATGEAWHEIM
LSCLGNRACDPYANASECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSIL
GPHHLDEFIRVWAEYDPAACGRISYNDMFEMLKHMSPPLGLGKKCPARVAYKRLVRMNMP
ISNEDMTVHFTSTLMALIRTALEIKLAPAGTKQHQCDAELRKEISSVWANLPQKTLDLLV
PPHKPDEMTVGKVYAALMIFDFYKQNKTTRDQIHQAPGGLSQMGPVSLFHPLKATLEQTQ
PAVLRGARVFLRQKSATSLSNGGAIQTQESGIKESLSWGTQRTQDALYEARAPLERGHSA
EIPVGQPGKLAVDVQMQNMTLRGPDGEPQPGLESQGRAASMPRLAAETQPAPDASPMKRS
ISTLAPRPHGTHLCNTVLDRPPPSQTSHHHHHRCHRRREKKQRSLEKGPSLSVDTEGAPS
SATGSGLPQGEGSTGCRRERKQERGRSQERRQPSSSSSDKQRFYSCDRFGSREPPQLKPS
LSSHPTSPTAALEPGPHPQGSGSVNGSPLMSTSGASTPGRGGRRQLPQTPLTPRPSITYK
TANSSPVHFAGGQSGLPAFSPGRLSRGLSEHNALLQKEPLSQPLAPGSRIGSDPYLGQRL
DSEASAHTLPEDTLTFEEAVATNSGRSSRTSYVSSLTSQSHPLRRVPNGYHCTLGLSTGV
RARHSYHHPDQDHWC
NT seq
6708 nt
NT seq
+upstream
nt +downstream
nt
atgatcctggccaccatcatcgccaactgcattgttctggccctggaacagcacctccct
gatggggacaagactcccatgtctgagcgcctggatgacacggaaccttatttcatcggg
atcttttgcttcgaggcggggatcaagatcatcgcactgggcttcgttttccacaagggc
tcctaccttcgaaatggctggaatgtcatggacttcgtggtggttctcacggggattctc
gccacagctggaactgactttgatctccggactctgagggctgtgcgtgtgctaagaccc
ctgaagctggtgtctggaattccaagtttgcaggtggtgctcaagtccatcatgaaggcc
atggttccactgctgcaaattgggctgttgcttttctttgccatcctcatgtttgccatc
atcggtcttgagttctatatgggcaaattccataaagcctgcttccccaacagcacagat
gcagaaccagtgggggactttccctgtggcaaggaggccccagctcgcctgtgtgagggt
gacactgaatgccgggagtactggccaggacccaactttggcatcaccaactttgacaac
atcctgtttgccatcttgacagtgttccagtgtatcaccatggagggctggactgacatc
ctctacaatacaaatgatgcagctggcaacacctggaactggctgtacttcatccctctc
atcatcattggctccttctttatgctcaacctagtgctgggtgtgctctcaggagaattt
gccaaggagcgggaacgagtagagaaccgccgcgccttcctgaagctccgtaggcagcag
cagattgagcgagaactgaacgggtacttggagtggatcttcaaggcggaggaagtcatg
ttggctgaggaggacaagaacgcagaagagaagtcccctttggatgtgttgaagagagct
gccaccaagaagagccgaaatgacctgatccatgcggaggagggggaggaccggtttgta
gatctctgtgctgttgggtctccctttgctcgtgccagcctcaagagtgggaagacggag
agctcatcatacttccggagaaaggagaagatgttccggttcttcatccggcgtatggtg
aaggcacagagcttctactgggtggtactgtgcgtggtggccctgaacacattgtgcgtg
gccatggtgcactataaccagcctcagcggcttaccactgcactgtactttgcagagttt
gttttcctgggtctcttcctcacggagatgtccctgaagatgtatggcctagggcctcga
agctactttaggtcttccttcaactgctttgactttggggtgattgtgggaagtatcttt
gaagtagtctgggctgccatcaaaccaggaacctcctttggaatcagtgtgctgcgggct
ctccgactactgaggattttcaaagtcacaaagtattggaactccctgaggaacctggtg
gtgtccctcctcaattccatgaagtccatcatcagcctcctcttcctgcttttcctcttc
attgtggtcttcgctctgttggggatgcagctgtttgggggacagttcaactttcaagat
gagaccccgaccaccaattttgataccttccctgctgccatcctcactgtctttcagatc
ctgacaggggaggactggaatgcagtaatgtatcatgggattgagtcacaaggtggagtc
agcaaaggcatgttttcttccttttacttcatcgtcttgacattgtttggaaactacacc
ctgctgaatgttttccttgccattgctgtggacaaccttgccaatgcccaggaattgacc
aaggatgaagaggagatggaagaagcagccaatcagaagcttgctctccagaaggccaaa
gaagtagctgaagtcagccctatgtctgctgccaacatctccatcgctgccaggcagcag
aactcggccaaggcgcgctcagtgtgggagcagcgggccagtcagctaaggctacagaac
ctgcgtgctagctgtgaggcactgtacagcgagatggaccccgaggagcgcctgcgttat
gccagcacgcgccatgtgaggccagacatgaagacacacatggaccggcccctagtggtg
gagcctggccgggacggcttgcggggacctgtggggaacaaggcaaagcccgagggcacg
gaagcaactgaaaatgcagacccaccacgcagacaccaccggcaccgtgatagagacaag
acctcagccacggcccctgctggcggtgaccaggacagaacagactgtccaaagacggaa
aacaccgaggctggggcccgggaggaacgtccacgccctcgtcgcagtcacagcaaggag
gctgcaggggctgaagtgcaagcccgcagtgagcgcagtgagcgcaacaggcgtcaccac
cgccgcggctccccggaggaggaggccactgaacgcgagccccggcgccaccgtgctcac
cggcatgcacaggaatcaggcaaagaaggcactgcacctgtgctcgcacccaagggcgag
cgacgcccacgacatcgaggccctcgcacgggcccccgtgaggcagagaacagcgaagag
cccacacgccggcaccgtgcaaggcataagggaccaccaacacttgagcccccggagagg
gaggctgcagagaaggagagcaatgtcgcagaaggggataaggaaacccgaaaccatcag
cccaaggaacctcactgcgatctggagaccattgcagtcacaggtgtgggccctctgcac
atgctgcccagcacctgtctccagaaagtggaagaacaaccagaagatgcggacaaccag
cgtaatgtcacccggatgggcagtcagccttcagaccccagcaccactgtgcatgtccca
gtgacactgacaggccctcccggggagaccactgtagttcccagtggtaatgtggacctg
gaaggccaagcagagggcaagaaggaggcagaggctgacgatgtgctgagaagaggcccc
cggcccatcgttccatacagctccatgttctgtctcagccccaccaacctgctccgtcgc
ttctgtcattacattgtgaccatgcggtactttgagatggtgattcttgtggtcattgcc
ctgagcagcattgccctggctgctgaggatcctgtgcgaactgattcatcccggaacaat
gctttaaagtacatggattacatctttacaggcgtcttcacctttgaaatggtcataaag
atgatagacttgggactgctgctgcaccctggagcctacttccgagacttgtggaatatt
ctggacttcattgttgtcagtggagccctggtggcatttgctttctcaggatccaaaggg
aaagacatcaataccatcaagtccctgagagtcctgcgtgtcctgcggcccctcaagacc
atcaaacggctacctaagctcaaggctgtgtttgactgtgtggtgaactccctgaagaac
gtcttgaacatcttgattgtctacatgctcttcatgttcatatttgctgtcattgccgta
cagctcttcaaggggaagtttttttactgcaccgatgaatccaaggagctggagagggac
tgcaggggccagtatttggattatgagaaggaagaagtagaagctcaaccaaggcagtgg
aagaaatatgacttccactatgacaatgtgctctgggccctgttgacgctgttcacggtg
tccacaggagaggggtggcccatggtgctgaaacactctgtggacgccacctatgaggag
caggggccaagccccgggttccggatggagctttccatcttctatgtggtctactttgtg
gtcttcccttttttctttgtcaacatctttgtggccttgatcattatcaccttccaggaa
cagggggacaaggtgatgtctgaatgcagcctggaaaagaatgagagggcttgcattgac
tttgccatcagtgccaaacccctgacacgatacatgccccaaaacaagcagtcattccag
tataagacgtggacatttgtggtctctccgccctttgagtacttcattatggccatgata
gccctcaacacagtggtgctgatgatgaagttctatgatgcaccgtatgagtacgagctg
atgctgaaatgcctgaatattgtcttcacatccatgttctctatggaatgcatattgaag
atcatcgcctttggggttctgaactacttcagagatgcctggaatgtctttgactttgtc
actgtgttgggaagtattactgatattttagtaacagagattgcggaaacgaacaacttc
atcaacttgagcttcctccgcctcttccgggcagcacggctgatcaagctgcttcgccag
ggctacaccatccgcatcctgctttggaccttcgtccagtcctttaaggcgctgccctac
gtgtgcctcctcattgccatgctgttcttcatctacgccatcatcggcatgcaggttttt
ggaaacattgcccttgatgatgacaccagtatcaaccgacacaacaacttccggacattt
ctacaagccttaatgctgttgttcaggagtgctactggggaggcctggcatgagatcatg
ctgtcttgtctgggcaaccgggcctgcgacccatacgccaacgccagtgaatgtgggagc
gactttgcctacttttattttgtctccttcatcttcctttgttcctttctgatgctgaac
ctctttgttgctgtgatcatggacaattttgagtacctcacgcgggactcttccatccta
gggcctcaccacctagacgaattcattcgagtctgggctgaatacgacccagctgcgtgt
gggcgcatcagttacaatgacatgtttgagatgctgaaacacatgtccccacctctgggg
ttggggaagaaatgcccggctcgagttgcatacaagcgcctggttcgcatgaacatgccc
atatccaatgaggacatgacggtgcactttacctccacactgatggccctcatccggaca
gcactggagatcaagcttgccccagcagggacaaagcagcaccagtgtgatgctgagctg
agaaaggagatatcatctgtgtgggctaatctgccccagaagactctggacttgctcgta
ccaccccacaaacctgatgagatgacagtggggaaagtctatgcagctctgatgatattt
gacttctacaaacagaacaaaaccacccgagatcagattcaccaagctcctggaggcctg
tcccagatgggtcctgtgtccctgttccaccctctgaaggccaccctggagcagacccaa
cccgctgtacttcgaggagctcgggttttccttcggcagaagagtgccacttccctcagc
aatggtggtgccatacaaacccaggaaagcggcatcaaggagtcactgtcctggggcaca
cagaggacccaggatgcactttatgaggccagagcacccctagaacgtggccattctgca
gagatccctgtggggcagccaggaaaactggctgtggatgttcagatgcagaacatgacg
ttgagaggtcctgatggggagccccagcctggtctggagagccaaggccgagctgcctct
atgccacgcctggcggcagaaacacagcctgcccctgatgccagccccatgaagcgctcc
atctccaccctggctccacgccctcacgggactcatctttgcaacacagtcctggaccgg
cctccccctagccagacatcacatcaccaccatcaccgctgccaccggcgcagggaaaag
aagcagaggtccctggaaaaggggcccagcctgtctgttgacacagaaggtgcaccaagc
agtgctacagggtctggcctgccccaaggagaaggatccacaggctgccgacgggagcgc
aagcaggagcgaggaaggtcccaggagcggaggcagccttcgtcctcttcttcagacaag
cagcgcttctattcctgtgaccgctttgggagtcgggagcccccacaactcaagccctcc
ctcagtagccaccccacatctccaactgcggcactagagccaggaccgcacccacagggc
agtggttctgttaatgggagccctttgatgtcaacatctggtgctagcaccccgggccga
ggtggacggaggcagctcccccagactcccctgaccccacgccccagcatcacctacaag
accgccaattcctcgcctgtccactttgctgggggtcagagtggcctcccagcattctcc
cctggccgtctcagccgcggcctttctgaacacaatgccctgctccagaaagagcccctg
agccaacctctagcgcctggctctcgcattggctctgacccttacctagggcagcgtctg
gacagtgaggcctctgcccacaccctgcctgaggatacactcacctttgaagaggcagtg
gctaccaactctggccgctcctccaggacttcctacgtgtcctccctcacctcccaatcc
caccctctccggcgtgtgcccaatggctaccactgcactttgggactcagcaccggcgtc
cgggcgcggcacagctaccaccacccagaccaggaccactggtgctag
DBGET
integrated database retrieval system
