Cricetulus griseus (Chinese hamster): 100770516
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Entry
100770516 CDS
T02813
Name
(RefSeq) nucleoporin SEH1 isoform X2
KO
K14299
nucleoporin SEH1
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03013
Nucleocytoplasmic transport
cge04150
mTOR signaling pathway
cge05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100770516
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
100770516
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100770516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cge03019
]
100770516
04131 Membrane trafficking [BR:
cge04131
]
100770516
Messenger RNA biogenesis [BR:
cge03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100770516
Membrane trafficking [BR:
cge04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
100770516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
ANAPC4_WD40
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
100770516
NCBI-ProteinID:
XP_027290171
UniProt:
A0A9J7GMJ2
LinkDB
All DBs
Position
Unknown
AA seq
360 aa
AA seq
DB search
MFLPHSIKADHKDLIHDVTFDFHGRRMATCSSDQSIKVWEKSESGDWHCTASWKTHSGSV
WHVTWAHPEFRQVLASCSADRTAAVWEEVVVESNDKLRGQSHWVNRKTLLDSRTFVTDVK
FAPKRMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEISCKLNCSCISWNPSISPAHYP
MIAVGSNDSSQKAVTKFQIFEYNENTKKYSKAEILMTVTDPVHDIEFAPNLGRSFHILAI
ATQDVRIFTLKPVSKELTSSGGPRKFEIHMVAQFDNHNSQVWRVSWNITGTVLASTGDDG
CVRLWKANYMDNWKCTGILNGKDSPVNGSSQLENSNPSLSSNTPNLQNSLHGSSAGRKHS
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgccacatagcatcaaggccgaccacaaggacctcatccacgatgtgactttc
gactttcacgggcgccggatggccacctgctccagtgatcagagcatcaaagtatgggaa
aaaagtgaaagtggggattggcattgtactgctagttggaagacacatagtggatctgta
tggcatgtgacatgggctcatcctgaatttagacaagttttggcttcctgttctgctgac
cgaacagcagctgtttgggaagaagtagtagtagaatcaaacgataaacttcgaggccag
agtcactgggtgaataggaaaactctactggacagtagaacatttgttactgatgtgaaa
tttgctcccaaacgtatgggtctgatgttagcaacctgttcagcagatggcatagtaaga
atatatgaggccccagacgttatgaatctcagccagtggtctctacagcacgagatctca
tgtaagctgaactgtagctgtatttcttggaacccttccatctctccggctcattacccc
atgatcgcagtgggaagtaatgacagcagtcaaaaagcagtgaccaagtttcagattttt
gagtacaatgaaaacaccaagaaatactcaaaagcagaaattcttatgacagtaacagat
cctgttcatgatattgaatttgctccaaatttggggagatctttccacatcctggcaata
gccactcaagatgtaagaattttcacattaaaacctgtgagtaaagaacttacttcttct
ggtggtcccagaaaatttgaaatccatatggtggctcagtttgataatcacaactctcag
gtctggagggtgagttggaacatcacaggaacagtgctagcatccacaggagatgacggc
tgcgtgaggttgtggaaagctaattacatggacaattggaagtgtactggtattttgaat
ggtaaagatagcccagtaaatgggagttctcagctggaaaactcaaatccttcactaagc
tcaaatactccaaatcttcaaaactcattacatggatcttctgctggcagaaagcacagc
tga
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integrated database retrieval system