Cricetulus griseus (Chinese hamster): 100770796
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Entry
100770796 CDS
T02813
Symbol
Cnot10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X4
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100770796 (Cnot10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cge03019
]
100770796 (Cnot10)
Messenger RNA biogenesis [BR:
cge03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100770796 (Cnot10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_12
ARM_TT21_N
ARM_TT21
TPR_8
TPR_MalT
TPR_17
TPR_7
DUF6058
EMP24_GP25L
Motif
Other DBs
NCBI-GeneID:
100770796
NCBI-ProteinID:
XP_027271103
UniProt:
A0A8C2N239
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All DBs
Position
4:complement(221649606..221701001)
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AA seq
744 aa
AA seq
DB search
MAADKPADQGAEKHEGAGQSSGVTDQEKELSTSAFQAFTSGNYDACLQHLASLQDINKDD
YKIILNTAVAEFFKNNQTTTDNLRQTLNQLKNQVHSAVEEMDGLDDVENSMLYYNQAVIL
YHLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYILTHQAEKALHLLAVLEKMIS
QGSSSKNGKNETGNNSNKDGSNPKAESGALIEAAKSKIHQYKVRAYIQMKSLKACKREIK
SVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGFMKTGECLRCMFWNNLG
CIHFAMGKHNLGIFYFKKALQENDNVCAQLSACGTDPGKKFSGRPMCTLLTNKRYELLYN
CGIQLLHIGRPLAAFECLIEAVQVYHANPRLWLRLAECCIAANKGTSEQETKGLPTKKGI
VQSIVGQGYHRKIVLASQSIQNTVYNDGQSSAIPVASVEFAAICLRNALLLLPEEQQDPK
QENGSKNSSQLGGNAESSESSETCSSKSHDGDKFIPAPPSSPLRKQELENLKCSILACSA
YVALALGDNLMALSHADQLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVT
DVSLGISSNEQDQGSDKGENEAMESSGKRAPQCYPSSVNSARTVMLFNLGSAYCLRSEYD
KARKCLHQAASMIHPKEVPPEAILLAVYLELQNGNTQLALQMIKRNQLLPTVKAHSDVRK
KPVFQSVHPIQPIQMSSFTTVQRK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacaagcctgcagatcagggagcagagaaacatgaaggggcaggccagtca
tctggggtcaccgaccaggagaaggagctgtccaccagtgctttccaggccttcacatct
ggaaattatgatgcctgtctgcaacaccttgccagtctccaagatataaacaaagatgat
tacaaaataattttgaacacagcagtagctgaattttttaaaaataatcaaacaacaaca
gataatttgagacaaacacttaaccagctgaagaatcaggttcactcagctgttgaagaa
atggatggattagatgatgttgaaaacagcatgttgtattataatcaagcagtcattctt
tatcatctgcggcagtatacagaggccatatctgttggtgaaaaactctatcagttcata
gaaccttttgaagaaaaatttgcccaagcagtgtgctttctgcttgtagacttgtatata
ttaacccaccaagctgagaaagctctgcatcttcttgctgtcctagaaaaaatgatctca
cagggcagcagcagcaaaaacggaaagaatgagactggcaataatagcaacaaggatgga
tctaatcctaaggctgagagtggagctctaatagaggctgcaaagtccaagatacaccag
tacaaagtcagagcgtacatccagatgaagtccctgaaggcttgcaaacgggaaatcaag
tctgtcatgaacacggctggaaattctgcaccctccctgtttctcaaaagcaattttgag
tacttaaggggcaattatcgaaaagcggtgaagctcttaaatagttcaaacattgccgag
catccaggcttcatgaaaacaggtgaatgcttgaggtgcatgttttggaataatcttggt
tgcatccattttgccatgggcaagcacaatttggggattttctactttaagaaggctctg
caagaaaatgacaatgtctgtgcccagctcagtgcatgtggcactgatccaggcaaaaag
ttttctggaagacccatgtgtactttgctaaccaataagaggtatgaactgctgtacaac
tgtgggatccagctgctgcacatcgggaggccactggctgccttcgagtgtctgattgaa
gctgttcaggtttatcatgcaaatccccggctttggctgcggctggctgaatgctgcatt
gctgccaataaagggacttctgagcaagaaactaaaggtcttcctactaaaaaggggatt
gtgcaatctattgtcggtcaggggtatcaccgtaaaatagttctggcatcacagtctatt
cagaacactgtctacaatgatgggcagtcttcagccattcctgtagccagtgtggagttt
gcagccatctgcctcagaaatgcattgctgctgttacctgaagaacaacaagacccaaag
caggagaatggctccaagaacagcagccagctaggagggaatgcggagagcagcgagagc
agtgagacatgcagcagtaaaagccatgatggagataagttcattccagctccaccgtct
tctccgttgaggaaacaggaattggaaaacctaaagtgttccatccttgcttgcagtgct
tacgtggctctggccttaggtgataacctcatggctttgagtcatgcagaccagctcctt
cagcagcccaagctgtctggctctcttaagtttctgggccatttgtatgctgcagaagct
ctcatctcccttgacagaatatctgatgccattacgcacttgaacccagagaatgtcact
gatgtctccttagggatctcttcgaatgagcaggaccaaggatcagacaagggtgaaaat
gaagcaatggagtcctctggcaagcgcgcccctcagtgctaccccagttctgtcaactct
gcccggaccgtgatgctcttcaacctgggcagcgcgtactgcctgaggagtgaatatgac
aaagcccggaagtgtctgcaccaggcggcttcaatgatccatcctaaagaggtgccccct
gaggccatcctgctggcagtctaccttgaactgcagaatggcaacacacagctagccctg
cagatgatcaagcggaaccagctgctccccacagtgaaggcgcactccgacgtgaggaag
aagccggtgttccagtctgtgcacccaatccagcccatccagatgtcctcattcaccacc
gtgcagaggaagtga
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