Cricetulus griseus (Chinese hamster): 100771175
Help
Entry
100771175 CDS
T02813
Symbol
Clstn1
Name
(RefSeq) calsyntenin-1 isoform X2
KO
K22659
calsyntenin 1
Organism
cge
Cricetulus griseus (Chinese hamster)
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cge04515
]
100771175 (Clstn1)
Cell adhesion molecules [BR:
cge04515
]
Cadherins
Cadherin related
100771175 (Clstn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
FAM176
EphA2_TM
V_ATPase_I
Toxin_R_bind_N
Cadherin_C_2
SID-1_RNA_chan
PFF1_TM
Zip
Motif
Other DBs
NCBI-GeneID:
100771175
NCBI-ProteinID:
XP_027254077
UniProt:
A0A9J7F8X4
LinkDB
All DBs
Position
2:complement(6730004..6791428)
Genome browser
AA seq
981 aa
AA seq
DB search
MLRRPAPALAPAVRLLLAGLLCGGGVWAARVNKHKPWLEPTYHGIVTENDNTVLLDPPLI
ALDKDSPLRFAESFEVTVTKEGEICGFKIHGQNVPFDAVVVDKSTGEGIIRSKEKLDCEL
QKDYTFTIQAYDCGKGPDGTGVKKSHKATVHIQVNDVNEYAPVFKEKSYKAAVVEGKQHG
SILRVEAVDADCSPQFSQICSYEILTPDVPFTVDKDGYIKNTEKLNYDKEHQYKLTVTAY
DCGKKRATEDALVKISIKPACSPGWQGWSNRIEYEPGTGALAVFPSIHLETCDEPVTSVQ
ATVELETSHIGKGCDRDTYSEKSLHRLCGAAAGTSELLPSPSGSLNWTVGLPTDNGHDSD
QVFEFNGTQAVRIPDGVVSLDPKEPFTISVWMRHGPFGRKKETILCSSDKTEMNRHHYSL
YVHGCRLVFLLRQDPSEEKKYRPAEFHWKLNQVCDEDWHHFVLNVEFPSVTLYVDGVSHE
PFSVTEDYPLHPTGIETQLVVGACWQEYSGVESGNETEPVTVASAGGDLHMTQFFRGNLA
GLTIRSGKLADKKVIDCLYTCKEGLDLQVPEDGGRGVQIHASSSQAVLTLEGDDVGELDK
AMQHVSYLNSRQFPTPGIRRLKITSTVKCFNEAACIEVPPVEGYVMVLQPEEPKISLSGV
HHFARAASEFESPEGVSLFPELRIISTITREVEPEGDGSEDPTVQESLVSEEIVHDLDTC
EVTVEGEELNPEQESLEVDMARLQQKGIEASHSDLGVVFTGVDTMASYEEVLHLLRYRNW
HTRSLLDRKFKLICSELNGRYLSNEFKVEVNVIHTANPVEHANHMAAQPQFVHPEHRSFV
DLSGHNLASPHPFAVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENE
MDWDDSALTITVNPMETYEDQHSSEEEEEEEEEEESEDGEEEEEITSAESESSEEEEGGP
GDGQNATRQQQLEWDDSTLSY
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccgccctgcgcccgcgctggccccggccgtccggctgctgctggccgggctg
ctgtgcggcggcggggtctgggccgcgcgagttaacaagcacaagccatggcttgagccc
acctatcatgggatagtcacagagaacgacaacacggtgctgctggacccccccctcatc
gccctggataaagattcaccacttcgatttgcagagagttttgaggtgacagtcaccaaa
gaaggtgagatttgtggctttaagattcacgggcagaatgtcccctttgatgctgtggtg
gtggataagtccacgggggagggaataatccgctcaaaagagaagctggactgtgagctg
cagaaagactacacgttcaccatccaggcctatgactgcgggaagggaccagatggcact
ggggtgaagaaatctcacaaagcaaccgttcacatccaggtcaatgacgtgaatgagtac
gcgcctgtgttcaaggagaagtcctacaaggcggccgtggtggaagggaagcaacatggc
agcatccttagggtggaggccgtggacgcagactgctccccgcagttcagccagatctgc
agctatgagattctcaccccggatgtgccattcactgtggacaaagacggttatattaaa
aacacagagaagctgaactatgacaaagagcatcaatacaaactcacggtcacggcctat
gactgtgggaagaagagagccacggaagatgccctggtgaagatcagcattaagccagct
tgcagccctgggtggcaaggctggagcaacaggattgaatatgaacccggcacgggtgct
ttggctgtcttcccaagcatccatttggagacctgtgacgagcctgtcacctcagtgcag
gccacagtggagctggagaccagccacatcgggaaaggctgcgaccgagacacctactct
gagaagtcccttcaccggctctgtggggctgctgccggcacctcagagctgctgccttcc
ccaagtggttccttaaactggactgttggactccccactgacaacggtcatgacagcgac
caggtctttgagttcaatggcactcaggccgtgaggatcccagacggtgttgtgtccctt
gaccccaaagagccctttacaatttctgtgtggatgcggcatgggccttttggccgcaag
aaggagacgattctctgcagttcagacaaaacagaaatgaaccggcaccattattcactc
tatgtccatgggtgcagactcgtcttcctcctccgccaggacccgtccgaggagaagaaa
tacagaccggcagagttccactggaagttgaaccaggtctgcgatgaggactggcaccac
ttcgtcctgaatgtggaattcccaagtgtgacactctatgtggatggcgtttcccatgag
ccattctctgtgacagaggactaccctcttcatccgactgggatagagactcagcttgtg
gtcggagcttgctggcaagagtattcaggagtcgaaagtggcaatgagactgagcctgtg
actgtggcctctgcaggtggtgacttgcacatgacacagtttttccgtggtaacctggct
ggcctcacaatccgttctgggaaactggcagataagaaagtgattgactgtctatacacc
tgcaaggaggggctggacctgcaggtccccgaggatggtggcagaggtgtgcagatccat
gcaagctccagtcaggcggtgttgaccttggagggagatgatgtcggagagctcgataag
gccatgcagcatgtttcctacctgaactcgaggcagttccccacacccggcatccgcagg
ctcaaaatcaccagcacagtcaagtgtttcaatgaggccgcttgcattgaggtgccgcca
gttgaaggctacgtgatggttctgcagccagaagagcccaagatcagcctgagtggggtc
caccactttgcccgggctgcttctgagtttgagagcccagagggtgtttccctcttccct
gaacttcgaatcatcagtaccatcaccagagaagtggagcctgagggggacgggtcagag
gaccccacagttcaagagtccctggtgtcagaagaaattgtacatgacctggacacctgc
gaggtcacagtggaaggggaggagctgaacccagagcaggagagcctggaggtggatatg
gcccgcctccagcagaagggcattgaagcgagccactctgacctgggcgtggtctttaca
ggtgtggacaccatggccagctatgaggaggttttgcacctcctgcgataccgtaattgg
cacaccaggtccctgcttgaccggaagttcaagctcatttgttcagaactaaatggtcgc
tacctcagcaatgaattcaaggtggaggtgaatgtgatccacacagccaaccctgtggaa
cacgctaaccacatggctgcccagccacagttcgtccaccctgaacatcgctcctttgtt
gacctgtctggtcacaatctggccagtcctcacccttttgccgttgtccccagcacagca
actgttgtgattgtggtgtgtgtcagcttcctggtcttcatgatcatcctgggggtgttt
cgaatccgagctgcacaccagcgaaccatgcgggaccaggacacagggaaggagaatgag
atggattgggacgactctgccttgaccatcaccgtaaaccccatggagacatatgaggac
cagcacagcagtgaggaggaggaggaggaggaggaggaggaggagagtgaagatggggag
gaggaggaggagattactagtgccgagtcagagagcagcgaggaggaggaaggtggccct
ggggatggtcagaacgcaacccgacagcagcagctcgaatgggacgactccacgctcagc
tactaa
DBGET
integrated database retrieval system
