Cricetulus griseus (Chinese hamster): 100771317
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Entry
100771317 CDS
T02813
Symbol
Dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X2
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100771317 (Dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cge03019
]
100771317 (Dhx36)
03012 Translation factors [BR:
cge03012
]
100771317 (Dhx36)
Enzymes [BR:
cge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100771317 (Dhx36)
Messenger RNA biogenesis [BR:
cge03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100771317 (Dhx36)
Translation factors [BR:
cge03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100771317 (Dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
AAA_22
HA2_N
AAA_19
nSTAND3
PhoH
AAA_14
ATPase
NPHP3_N
DUF6782
Motif
Other DBs
NCBI-GeneID:
100771317
NCBI-ProteinID:
XP_027247508
UniProt:
A0A8C2M474
LinkDB
All DBs
Position
1
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AA seq
1004 aa
AA seq
DB search
MSYDYHQSWSRDAGPRGSGQGSGGGGGGSRGPGGGGGGGGGGRGGRGRHPGHLKGREIGL
WYAKKQTQKNKEAERQERAVVHMDERREEQIVQLLNSVQAKNDKDSEAQISWFAPEDHGY
GTEVSSEKKMNSEKKFDNQEKKSMNQEKKTFRITDKSYIDRDSEYLLQENEPNVGLDQQL
LEDLQKKKTDPRYIEMQHFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFI
LDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQ
GSILYCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTIIKDLLNFRSDLKVIL
MSATLNAEKFSEYFGDCPMIHIPGFTFPVVEYLLEDIIEKIRYIPEQKEHRSQFKRGFMQ
GHVNRQEKEEKEAIYKERWPVYIKELRTRYSASTVDVLERMDDDKVDLNLIAALIRYIVL
EEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDKFIIIPLHSLMPTVNQTQVFKKTPPGV
RKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAG
RVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSN
EAVMLSIKHLMELSALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAAS
LSFKDPFVIPLGKEKIADARRKELAKETRSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEY
FLSSNTLQMLHNMKGQFAEHLLGAGFVSSRSPKDPKANINSDNEKIIKAVICAGLYPKVA
KIRLNLGKKRKMVKVHTKSDGLVSIHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTE
VSPYCLLFFGGDISIQKDNGQEVIAVDEWIVFQSPERIAHLVKGLRKELDSLLQEKIERP
HPVDWNDTKSRDCAVLSAILDLIKTQEKAVPRNLPPRSQEGYYS
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgactaccatcagagctggagccgcgacgcggggccgcggggctccggccag
ggctctggcggcggcggcggagggagccggggcccaggcggcggcggcggaggaggagga
gggggccgcggtggtcggggacggcatcccggacacctgaagggtcgcgagatcggcctc
tggtacgccaagaagcagacgcagaagaacaaggaggccgagaggcaggagagagctgta
gtacacatggatgaacgacgagaagagcagattgtgcagctgctgaattctgtgcaagct
aagaatgataaagattcagaagcacagatatcctggtttgctcctgaggatcatgggtat
ggtacggaagtgtcttcggagaaaaagatgaactcagagaagaaatttgacaaccaggaa
aagaaatcgatgaaccaagaaaaaaagacattcaggatcacagacaaatcatacatcgac
cgagattctgagtacttattgcaagaaaatgagccaaatgttggccttgaccaacagtta
ttggaagatttacaaaagaaaaaaacggatcctcggtatatagagatgcagcatttcaga
aaaaagctgccttcgtatggaatgcaaaaggagctggtaaatttaatcaataaccatcag
gtaacagtaattagtggtgaaacgggctgtggcaaaaccactcaggttacccagttcatc
ttggataactacattgaaagaggaaaagggtctgcctgcagaatagtgtgtactcagcca
agaagaattagtgccatttcagttgccgagagagtagctgcagaaagggcagagtcttgc
ggcaatggtaatagtactggataccagattcgtctccagagtcggttgccaaggaaacag
ggctctatcttatactgcacaacaggcatcattcttcagtggctccagtcagactcgcgt
ttgtccagcgttagccatattgtacttgatgaaattcatgaaaggaatctacagtcagat
gttttaatgaccattattaaagatcttctcaattttcgatctgacctgaaagtaatatta
atgagtgcaacattgaatgctgagaaattttcagaatattttggtgactgtcctatgata
catatacctggttttacttttccagttgtggaatatcttttggaagatatcattgaaaaa
ataagatatattccagaacaaaaagaacatagatcccagttcaagaggggtttcatgcag
ggccatgtaaatagacaagaaaaagaagaaaaagaggctatctataaagagcgctggcca
gtttatataaaggaacttcgaacaagatactctgcaagtaccgtagatgttttggaaagg
atggatgatgataaagttgatctgaatttgattgctgcccttattcgatacattgttttg
gaagaagaggatggtgcaatactggtctttctaccaggctgggacaatatcagcacttta
catgatctcttgatgtcacaagtgatgtttaaatcagataagtttattattataccttta
cattcactgatgcctacagtaaaccagacacaggtatttaaaaaaactcctcccggcgtt
cggaaaatagtaattgctaccaacattgcagagactagcatcaccatagatgatgtggtt
tatgtaatagatggaggaaaaattaaagagacacactttgacacacagaacaacatcagt
accatgtctgctgagtgggttagtaaagctaatgctaaacagaggaaaggaagagcggga
agagttcagcctggtcattgttatcatctgtataatggccttagagcaagtcttctggat
gactaccaactaccagaaattttgagaactcctttggaagaactttgtttgcaaataaag
attttaaggctaggtggaattgcttattttctgagtaggttaatggatccaccatcaaat
gaggccgtaatgctctccataaaacacctaatggaactgagtgctttggataaacaagaa
gaattgacacctcttggcgtccatttagccagattacctgttgagccacatattggaaaa
atgattctgtttggagctttattctgttgcttagatccagtactcactattgctgccagt
ctcagctttaaagatccctttgtcattccactgggaaaagaaaagattgcagatgcaaga
agaaaggagttggcaaaggaaaccagaagtgatcacctgacagttgtgaatgcatttgag
ggatgggaagaagctaagcggcgtggtttcagatatgaaaaagactactgctgggaatat
tttctgtcttcaaacacactgcagatgctgcataacatgaagggacagtttgctgagcat
cttcttggagctggatttgtaagcagtagaagtcctaaagatccaaaagctaatataaat
tcagataatgagaagataattaaagctgtcatctgtgccggtttatatcccaaagttgct
aaaattcgactaaatttgggtaaaaaaagaaaaatggtaaaagttcacacaaaatctgat
ggtctggtttctattcatcctaagtctgtcaatgtggagcagacagacttccactataac
tggcttatctatcacttgaagatgaggacaagcagtatttacttgtacgactgtacagaa
gtttcaccatactgcttgctgttttttgggggagatatttccatccagaaagataatggt
caggaagtgattgctgtagatgagtggattgtgtttcagtctccagaaagaattgcccat
cttgttaaggggctaagaaaagaactggatagccttcttcaagagaagattgaacgccct
caccctgtagactggaacgatactaagtccagagactgtgcagtactgtcagctattcta
gacttgatcaaaacacaggaaaaggctgttccaaggaacttgccaccacggtcacaggag
ggatattacagctga
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