Cricetulus griseus (Chinese hamster): 100772016
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Entry
100772016 CDS
T02813
Name
(RefSeq) protocadherin beta-4 isoform X1
KO
K16494
protocadherin beta
Organism
cge
Cricetulus griseus (Chinese hamster)
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cge04515
]
100772016
Cell adhesion molecules [BR:
cge04515
]
Cadherins
Protocadherins
100772016
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
REJ
Motif
Other DBs
NCBI-GeneID:
100772016
NCBI-ProteinID:
XP_027253896
UniProt:
A0A9J7FDS3
LinkDB
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Position
2:complement(200243125..200262099)
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AA seq
795 aa
AA seq
DB search
MERIHPNRQVMAFIFMLVLAQVCSEQTTRYSILEETESGSFVAHLSKDLGLRSGELTARS
ARVMSDDYKQRLLLDPETGDLLLREKLDREELCASVEPCVLHFQVSLEKPVQYFQGELLI
QDINDHSPEFPDKEMLLKIPENSQPGTLFPLNLAQDLDVGSNGLQQYTVSPTSHFHVVTR
NNSEGKKYPELVQDRALDREEQAEMSLTLTALDGGSPPRSGTAMVRILILDINDNAPEFV
NTPYEVQVLESSPPDSPVLTVLAKDADAGNFGRVSYGLFQASDEILQTFSINEVTGEIRL
KRGLDFEKIKSYHVKIEATDGGGLSGKGAVVIEVLDVNDNAPELTISSLANSVPENAPET
IISIFRVGDRDSGENGKVVCSIPENLPFILKSTFKNFYTLVTEIPLDRESRAEYNITITV
TDLGTPRLTTQHTIKVQVSDVNDNAPAFTQTSYTLFVQENNSPALHIGTISATDSDSGSN
AHITYSLLPTHDPQLALSSLISINADNGQLFALRALDYEALQTFEFRVGATDQGSPALSS
QALVRVLVLDANDNAPFVLHPLQNASAPCTELLPRAAEPGYLVTKVVAVDRDSGQNAWLS
FQLLKATEPGLFTVWAHNGEVRTSRLLSERDAPKHRLLLLVKDNGDPPRSASVTLQVLVV
DGFSQPYLPLPEVVQDPAQKDEKELTLYLVIALASVSSLFLLSVLLFVAVKLCSKARETS
LGGCSVPEGHFPGHLVDVSGAGTLSHSYQYEVCLTGDSGTGEFKFLKPMIPELLTQDPGR
ELKENLHCRDSFVFS
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggagagaattcacccaaacaggcaagtcatggcttttatctttatgctggttttggct
caggtttgcagtgagcaaacaactcggtactctatcttggaggaaacagaaagtggctcc
tttgtagcccatctgtccaaggacctgggcctgagatctggggaactgacagcccgctct
gcacgggtgatgtctgatgattacaagcagagattgctgctggatcctgagacaggagat
ctgcttctgagggagaaactagaccgggaagagctgtgtgcctccgtggagccctgtgtg
ctacatttccaggtgtctcttgaaaagccagtgcagtattttcaaggagaattgctgatc
caggacataaatgaccactcaccagaattcccagataaggaaatgctcttgaaaatacca
gaaaacagccagccagggactctgtttccactgaatttagctcaagacttggatgtgggc
agcaatgggcttcaacagtacacagtcagccccacctctcattttcatgtggtcactcga
aataacagtgaaggcaagaagtacccggaattggtgcaggacagagccctggacagagag
gagcaggcagagatgagcttgaccctcacggctctggatggcgggtctccacctaggtca
ggaacagctatggttcgaatcctgatcctggacatcaatgacaatgcccctgagtttgtg
aacaccccctatgaggtgcaggtcctggagagcagtcccccagactccccagtcctgact
gtcctagctaaggatgcagatgctggcaacttcgggagagtttcttatggattgttccaa
gcctcagatgaaattctacaaactttctcaataaatgaagtcaccggagaaatacgactg
aaaaggggattggattttgagaaaatcaaatcttaccatgtgaaaatcgaggccacagat
ggaggaggcctttctgggaagggtgctgtggtgatagaggtgttggatgtgaacgacaat
gccccagagctgacaatatcttcactggccaactcagtcccagaaaacgctccagagacc
ataatcagcatcttcagagttggagacagggattccggagagaatggaaaggtggtttgt
tctattccagaaaacctgccattcatcctaaaatccactttcaagaatttctacaccctg
gtgacagagattccactggacagagagagcagagctgagtacaacatcaccatcacagtc
accgacctgggcacacccaggctcacaacccagcacaccataaaagtgcaggtctcagat
gtcaacgacaacgcccccgccttcacacaaacctcctacaccctgtttgtccaggagaac
aacagccccgccctgcacataggcaccatcagcgccacagactcagactcaggctccaat
gcccacatcacctattcgctgctgcccacccacgaccctcagctggccctctcctcgctc
atctccatcaatgcagacaacgggcagctgttcgcgctcagggcgctggactatgaggcc
ctgcagaccttcgagttccgcgtgggcgccacagaccaaggctcgcctgcgctcagcagt
caggctctggtgcgcgtgctcgtgctggacgccaatgacaatgctcccttcgtgctccac
cctctgcagaacgcgtctgctccctgcacagagctgctgcccagggcggcagagccaggc
tacctggtcaccaaggtggtggcagtggaccgcgactctggccagaatgcctggctgtct
ttccagctgctcaaggccacggagccggggctgttcaccgtgtgggctcacaatggcgag
gtgcgcacctccaggctgctgagcgagcgcgatgctcccaagcacaggctgctgctgctg
gtcaaggacaatggcgatcctcctaggtctgccagtgtcactctgcaagtgctggtggtg
gatggcttctctcagccctacctgcctctgcccgaggtggtgcaggaccctgctcaaaag
gatgaaaaggaactcacgctgtacctggtcattgccttggcatctgtgtcttcgctcttc
ctcttgtctgtgctgctgttcgtggctgtgaagctgtgcagcaaggccagggagacatct
ctgggtggctgctctgtgccagagggacactttcctggacacctggttgatgtcagcggt
gcaggaaccctgtcccacagctaccagtacgaagtatgtctgaccggggattctgggact
ggtgagttcaagttcctcaaacccatgatccctgagctattgactcaggatcctgggaga
gaacttaaggaaaatctccattgcagggatagctttgttttcagctaa
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