Cricetulus griseus (Chinese hamster): 100772341
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Entry
100772341 CDS
T02813
Symbol
Abca6
Name
(RefSeq) ATP-binding cassette sub-family A member 6
KO
K05649
ATP-binding cassette, subfamily A (ABC1), member 6
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100772341 (Abca6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cge02000
]
100772341 (Abca6)
Transporters [BR:
cge02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
100772341 (Abca6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_22
AAA_29
AAA_15
nSTAND1
AAA_23
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
100772341
NCBI-ProteinID:
XP_035303919
UniProt:
A0A9J7H683
LinkDB
All DBs
Position
7:complement(122957415..123028242)
Genome browser
AA seq
1628 aa
AA seq
DB search
MTMKEISVYQQTRALLHKNLLKKWRMKRESFLEWSIPIIVGLYMGLFSYFKENMQFPEIP
PKDLGSVDEFNGSSIMVVYTPISNITQLIMNKTTLAPSMKGTTIIGVPSKKDLDEVLLNS
IPHALGIIFNDTFSYKLEVFLMYGNPFLKEDLLAHCWDIYGDISCSLSRYWKKGFVPLQT
AINAAIIEITTNHSVMEELMSVNAVTMKTLPFITKDIFQYEFFILFCLLYFSSFMYFISR
NVTKERKKYKELMKIMGLQDSAFWLSWGLIYVGFIFIISIFIAIIITSAKIIVMTGFLVI
FTLFFLYGLSLITVAFLMAVLLQKAILTNLVIFLFTLFWGCVGFTVLHKQLPTSLEWILS
ICSPFAFTSGMAKIISLDYNLNGVVFPDPSGESYLILVTFSILAFDALIYFVLALYFDKI
LPYGNEHSYSPLFFLNSSSCLQQKSSSNQVLERGIDPELPSDDSFEPVAPEYQGKEAIRI
RNIKKEYKGKSGKVEALKGLFLDIYESQITAILGRSGAGKSSLLNILNGLYVPTSGLVTV
YNKNLSEMQDLKEIRRITGVCPQHNVQFDALTVKENLTLFAKIKGILPQKVKQEVQQIIL
ELDMQNIQDNLVEHLSEGQKRKLTFGIATLGDPQILLLDEPTVGLDPFSRQRVWSFLKER
KANRVILFSTQFMDEADILADRKVILSNGSLKCTGSSVFLKRKWGLGYHLSLFIDETCDL
EQITSSINHHIPDAKLKAKTKEKLVYILPLERTSKFPDFFRDLDKYSDQGLVNYEVSMST
LNEAFMNMEGESTTKQNFEKRETIRDTESLQEMEPAYPSLSEVQRTVSPMKLWGMQVCAI
ARLRILKLKRERKAFLTFLLIFGIALFPLIMEKMANAVIEQKNDWEFKTELYFLSPGQLP
EGLRTSLLVINNTESNIEDFIQSLKHQNIVLEVDDFENRNGTESLSYNGAIIVSGRQKDY
RFSVVCNTKRLHCFPILMNVLSNGILHMLNHTQYIRIEEAVFSSDLIMLWFGILEGLLFL
LLVACSISPHIAMSSVSDYKKKADSQLWISGLYPSAYWCGQAVVDINLFNVILLSSYFTL
HVTKLMHIYLTSEVVLSIVVVLFGCAASLVFLTYVISFVFGKRRKNSGLWSICFFTVMAV
MFKILLTEFFSETLLIIMMVLVPSFSLIAFLIFLEMRSFQHYSEFGEIKYGLSGVDLLLC
LIPYFHTLLFIFVLRCLELKCGKNVMRKDPIFRISPRSVKVQPNLEEHIGEDEDEDEDVQ
AERIRTSAALSTSNLNERPVIIANGLYKEYAGQKKCCFSKRTKKVAARNISFCVNKGEIL
GLLGPNGAGKTSSVRMIAGITKPAAGEVELKGSSSAVGYQGDGTIKFGYCPQENMLWPIL
TVKEHLQVYASVKGLRKKDATIAISRLVNAFKLHDQLNVLVQKLAAGATRKLCFVLSILG
DSSILILDEPSTGLDVSEQQQVWQAIQAAVKDNDRGVLLTTHDLAEAEALCDRVAIMVSG
RLRCIGSIQHLKRKFGKDYILELKVNETSQVPLVHRDIVKLFPQAARQERYFSLLTYQLP
ITDVYPLSQAFHKLEAVKHSFNLEEYSLSQCTLDKVFLELSKDQELETVHEEADTTVRWK
LLPRLDEL
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atgactatgaaagagataagtgtttatcagcaaacccgagcgcttttgcacaagaatctg
ctcaagaaatggagaatgaaaagagagagctttttggaatggagcatcccaattattgta
ggactgtatatgggtctattttcatatttcaaagaaaacatgcagttccccgaaatcccg
cctaaggatcttggaagtgtagatgaatttaatggatcttctataatggttgtatataca
ccaatctctaacataacccaactgataatgaataaaactactttagctccttctatgaaa
ggaacaacaatcattggggtaccgagtaaaaaagacctggatgaagtgcttctgaatagt
attccccatgctcttggaatcatatttaacgacactttctcttacaagttagaagtattt
ctaatgtatggaaatccatttttgaaagaagacttattagctcattgctgggatatatat
ggtgatatttcatgttcattgtccagatactggaaaaaaggatttgtgcctttacaaact
gccatcaatgctgctattatagaaatcacaacaaaccactctgtgatggaggagttgatg
tctgttaatgcagtaactatgaagacattgccttttattactaaagatatttttcaatat
gaattttttattttattctgcttgctttatttctcctcgtttatgtattttatatcacgt
aatgttactaaagagagaaaaaagtataaggaattgatgaaaataatgggtctacaagat
tcagcattctggctgtcctggggcttaatctatgttggcttcatcttcattatttccata
ttcattgcaattatcataacatctgccaaaattatagtgatgactggtttccttgtcata
tttacactctttttcttatatggattatctttgataactgtagctttcctgatggctgtc
ttgttacagaaagctatcctcaccaatctagtcatatttctctttaccctcttttggggg
tgtgtggggttcactgtacttcataaacaactccccacatctctggaatggattctgagt
atttgcagcccttttgctttcacctctgggatggctaagattatctccttggattataac
ttgaatggtgtagtgtttcctgacccttcaggagaatcatatttaatactagtgacattt
tccatattggcttttgatgctcttatctactttgttctggcattgtattttgacaaaatc
ttgccctatgggaatgagcacagttattcgccactgtttttcttgaattcatcatcttgt
ttgcaacaaaagagtagtagtaaccaggtccttgagagaggcatagaccctgagcttcct
tcagatgatagttttgagcctgtggctccagagtaccagggaaaagaagccatcagaata
agaaatattaaaaaagaatataaagggaagtctggaaaagtggaggctttgaaaggattg
ttccttgatatatacgagagtcagataacagcaatcctgggccgcagtggagcaggaaaa
tcttcattactaaacatcctcaatggattatatgtcccaacatcagggttagtcacagtc
tacaataaaaatctctctgaaatgcaagacttgaaggaaatcagaaggataactggtgtt
tgtcctcaacataatgttcaatttgatgcactcactgtgaaggaaaacctcacccttttt
gctaaaataaaagggattcttccacagaaagtcaaacaagaggtacaacaaattatattg
gaattggacatgcaaaatattcaggataaccttgttgaacatttaagtgaaggacagaaa
agaaagctcacctttgggattgccactttaggagatcctcaaattttgcttttagatgaa
cctactgttggactagatcccttttcaaggcaacgagtgtggagtttcctgaaggaacgc
aaggcaaatcgtgtgattctctttagtactcagttcatggatgaggcagacatccttgct
gacagaaaagtcatactatccaacgggagtctaaaatgcacaggttcttctgtgtttctg
aagagaaaatggggtcttggatatcacttaagtttgtttatagatgaaacatgtgattta
gagcagataacatcttccatcaatcatcacatccctgatgctaaattaaaagcaaaaacc
aaagaaaagcttgtgtacattttgccgttggaaaggacaagcaagtttccagatttcttc
agagatctcgataaatattctgaccagggcttggtgaattacgaagtttccatgtcaact
ttgaatgaagccttcatgaacatggaaggagaatcaactaccaaacaaaactttgagaaa
agagaaacaataagagacacagaaagcttacaggaaatggagccagcctatccttctctt
tctgaagtgcaaaggactgtgagcccaatgaaactctggggaatgcaagtctgtgcaata
gcacgacttcgcatcctaaaactaaaacgagagagaaaagcatttttgacctttctattg
atttttggaattgcactgttcccattgattatggaaaagatggctaatgctgtgatagag
caaaaaaacgactgggaatttaaaacagaattgtatttcctgtcccctggacaactccct
gagggtctgcgaacgagtctattggtcatcaataacacagaatcaaatattgaagatttt
atacagtcactgaagcatcaaaacatagttttggaagtagatgactttgaaaacagaaat
ggtactgaaagcctctcatacaatggagctattatagtttctggaagacaaaaggattac
agattttcagttgtgtgtaataccaagaggctacactgctttcctatcctaatgaatgtc
ctcagtaatgggatccttcacatgctcaatcatacacagtatattagaattgaggaagct
gtattttcatcagacctcataatgctctggtttgggatactggaaggtttactgttctta
ttgcttgttgcatgcagcatctcaccacatatcgccatgagtagtgtcagtgattacaaa
aagaaagctgattcccagttgtggatttctggcctctacccttctgcctactggtgtggg
caggcggtggtggatattaacctcttcaatgtaattcttctctcaagctacttcacatta
catgtgacaaaactcatgcacatttacttgacaagtgaagttgtgctatcgatagttgtt
gttttgttcggttgtgcagcttctcttgtcttcttgacatatgtgatatcatttgttttt
ggcaaaaggagaaaaaacagtggcctctggtcaatttgcttctttactgtcatggccgtc
atgttcaagatccttttgacagaattcttcagtgagacactgctcattatcatgatggtg
ttagttccttcattttcattgattgcattcctgatttttttggaaatgagatccttccag
cactacagtgaatttggagaaatcaaatatggtttatctggggttgatcttctattatgc
ctaataccttactttcatactttgctgttcatttttgttctgagatgcctggaacttaaa
tgtggaaagaatgtaatgcggaaggatcccattttcaggatatctccacgaagtgtaaag
gttcaaccaaatctagaagaacatataggtgaagatgaagatgaagatgaagatgtccaa
gcagaaagaataaggacatcagctgccttgagtacttcaaatttaaatgagagaccagtc
attatcgccaacggtctgtacaaagagtatgcaggtcagaagaaatgttgcttttcaaag
aggacaaagaaagtagcagcaagaaacatctctttttgtgttaataaaggcgaaattctg
ggattgttaggacccaatggagctggtaaaacttcttctgttaggatgatagctgggatc
acaaagccagcagctggagaggtggagctgaaagggtctagctcagctgtgggttaccag
ggcgatggcacaatcaagtttggatactgtcctcaggagaacatgctatggcccatcctg
acagtgaaagaacacctgcaagtgtatgcctctgtaaaagggctgaggaagaaggatgct
accattgccatttcaagattagtgaatgcttttaaactacacgaccagctgaatgtccta
gtgcagaaactagctgcaggagccactaggaagctgtgttttgtgctgagcatcctggga
gattcatctatcctaattctggatgaaccatctacaggcttagatgtgtctgagcagcag
caagtgtggcaggcaatccaggcagctgttaaagacaatgacaggggtgtcctcttgact
acccatgacttggctgaggctgaggctctgtgtgaccgagttgctatcatggtgtctgga
aggctgagatgcattggttcaattcaacacctgaaaaggaagtttggcaaggattacatt
ctagaactaaaagtcaatgaaacttcccaagtgccgttagtccacagggacattgtgaag
ctgtttccacaggctgcacgtcaggaaaggtatttctccttgttgacctaccagctaccc
ataacagatgtttatcctctgtctcaggcatttcacaagttagaagcagtgaagcatagc
tttaacctggaagaatacagcctctctcagtgcacactggacaaagtatttttagaacta
tcgaaggaccaggaactggaaactgttcatgaagaagctgatacaactgtgagatggaag
ctcctccctcgcttagatgaactataa
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integrated database retrieval system
