Cricetulus griseus (Chinese hamster): 100772869
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Entry
100772869 CDS
T02813
Name
(RefSeq) collagen alpha-6(IV) chain isoform X3
KO
K06237
collagen type IV alpha
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge04151
PI3K-Akt signaling pathway
cge04510
Focal adhesion
cge04512
ECM-receptor interaction
cge04820
Cytoskeleton in muscle cells
cge04926
Relaxin signaling pathway
cge04933
AGE-RAGE signaling pathway in diabetic complications
cge04974
Protein digestion and absorption
cge05146
Amoebiasis
cge05165
Human papillomavirus infection
cge05200
Pathways in cancer
cge05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100772869
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100772869
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100772869
09142 Cell motility
04820 Cytoskeleton in muscle cells
100772869
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
100772869
09154 Digestive system
04974 Protein digestion and absorption
100772869
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100772869
09162 Cancer: specific types
05222 Small cell lung cancer
100772869
09172 Infectious disease: viral
05165 Human papillomavirus infection
100772869
09174 Infectious disease: parasitic
05146 Amoebiasis
100772869
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100772869
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cge04147
]
100772869
00536 Glycosaminoglycan binding proteins [BR:
cge00536
]
100772869
Exosome [BR:
cge04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100772869
Glycosaminoglycan binding proteins [BR:
cge00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100772869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
100772869
NCBI-ProteinID:
XP_035305601
UniProt:
A0A9J7K9T0
LinkDB
All DBs
Position
X:39111981..39278785
Genome browser
AA seq
1698 aa
AA seq
DB search
MKELELLLELLEEGGNIFDIFVKKLVLRGQKTSYGKPCGGQDCSGGCTCSPEKGARGRPG
PIGTQGPAGPEGFAGPTGLSGLKGDRGFPGPLGPYGSKGDKGPMGVPGFVGLSGIPGHPG
QPGPRGPPGLDGCNGTQGAAGFPGPDGYPGILGPPGLPGHKGSKGEPAPFKDSITGMKGN
PGLPGLDGMAGPSGSPGSPGDAGPIGPPGLQGPPGPAGPSGPDGNMGLGFQGEKGVKGDV
GLPGPAGPPPSTGELEFMGFPKGKKGSKGEPGPPGFPGMSGPPGFPEFGSIGEKGERGIL
GLPGPRGSMGSEGVRGQPGRQGKKGTSGFPGINGFPGIKGEKGGIGLRGPDIFTDADGAV
ISGYPGDPGVPGLPGLRGDEGIQGQRGPSGTPGLPSLTGLPGALGPEGFLGLKGDQGNPG
RTTFGEAGLPGKDGFPGLPGLPGPSGPPRHTFETGPLPSTEPGFPGLQGERGQKGHQGLK
GVKGDPGFCACEGGTPNIGPHGEPGLPGTQGLIGLPGVKGTRGDPGSRGAPGPLGTPGLF
GSRGHTGLKGKKGEPTISRGSKLSGDKGDPGPQGTPGMAGAPGRNGIPGLPGLPGIPGDS
GSGFPGEKGSPGLPGEKGHDGPTGPPGIGLPGLPGPRGLPGDKGVDGLPGQQGFRGAQGV
TLPCIIPGSYGPSGFPGAPGFPGSKGARGLPGIPGKPGAHGSKGKPGSPGLIHLPGLPGF
PGPRGEKGLPGFPGLPGKDGLPGKAGSPGLTGSKGATGDIFGAENGASGEQGLQGLPGDK
GFPGDSGLPGPKGLNGKSGMLGPKGERGNPGSPGSPGQPGPTGSSDPLGIKGASGLPGAP
GLPGISGQSGKKGQRGNIGQPGSTGKRGLPGIKGLPGSQGSAGFLGSPGFSGVTGLPGIP
GQKGERGSSGPVGFPGLPGLPGIPGAAGIKGFPGSFGKVGQPGQTGSPGEKGDRGDPGSI
GVSGPRPPMLNLWFKGEKGSRGSTGSDGFPGPRGDKGEPGIPGLPGQPGAPGQSSTIKGL
SGSPGSPGSVGRIGLPGLKGSLGITGFPGMPGKSGSQGRIGTSGSLGATGIPGIKGDQGQ
TIGIPGSPGPKGQPGELGFKGVKGKDGLVGDRGYPGNKGDDGKVGIAGDPGLPGSPGLQG
ISGMRGDLGLPGSPGHLGSIGRPGPSGLIGPKGFSGPPGLHGLNGLPGTKGTHGTPGASI
TGVPGSAGMPGPKGEKGMSGIVIGDPGKQGSRGQKGDRGLPGLQGPAGLPGAPGISLPSV
IAGQPGDPGRPGLDGERGRPGLPGPPGPPGPSSDQGDSGDPGFPGIPGLQGLKGNQGLPG
FSGLSGDLGLKGIKGEPGLMGTPGKVGPPGDPGFPGMKGKAGPRGFSGPQGAPGHTPISE
AIQVPPGPPGLPGIDGIPGLAGEPGPQGSVGLQGSKGLPGIPGKDGPSGLPGPPGVLGDP
GLPGLQGPPGFEGAPGQQGPFGRPGMPGHNVRVGYTLVKHSQSEQVPLCPVGMSRLWVGY
SLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFVYCNINEVCHYARRNDKSYWLSTTAPIPM
MPVGQTQIPQYISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEG
GGQSLVSPGSCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERRQFREEPVSETLK
TGQLHTRVSRCQVCMKNL
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaactagaacttctactggaattgttagaagagggaggaaatatttttgacatc
ttcgtcaagaagttggtattaaggggacagaagacatcctatggaaagccatgtgggggc
caagattgcagtggaggctgtacatgctctcctgagaagggagcaagagggcgccctgga
ccaattggaactcaaggtccagcaggtcctgaaggatttgctggtcctactggtttatca
gggttgaaaggagacagaggcttcccaggccctctgggaccatacggatcaaaaggagat
aagggtcccatgggagttcctggctttgttggcctcagtggaattccgggccaccctgga
caaccaggtcccagaggtccacccggcctagatggctgtaatggaactcaaggagctgct
ggatttccaggccctgatggctaccctgggattttaggaccacctggacttcctggtcac
aaaggttcaaaaggagaacctgctccttttaaagacagcatcacaggaatgaagggaaat
cctgggctgcctggactggatggaatggctggtccatcaggatcccccggatctcctgga
gatgcaggacccataggaccaccaggcttacaaggtcccccaggccccgctggaccttct
ggtcctgatggaaatatggggttaggtttccaaggagaaaaaggagtcaagggggatgtc
ggcctccctggccctgcaggaccacctccatctactggggaactagaattcatgggattc
cccaaagggaagaaaggctccaagggtgaaccagggcctccaggtttcccaggcatgagt
ggccctccaggtttcccggagtttggatctattggagaaaaaggagaaaggggaatcctt
ggtttgccaggacctaggggttccatgggttcagaaggagtacgaggacagccggggaga
cagggaaagaaggggacttctggttttcctgggattaacgggttcccaggaattaagggt
gaaaagggtggcattggtctgcgaggcccagacattttcaccgatgcagatggtgctgtg
atctcaggttatcctggagaccctggtgtgccaggcctcccaggcctaagaggagatgaa
ggcatccaaggccaacgtggcccttctggcacccctggccttccatcattaacaggtctt
cctggtgccctagggcctgagggatttctaggcctgaaaggagaccaaggaaacccagga
cgcaccacctttggggaggctggcctacctggcaaagacggttttccaggtttaccaggc
ctaccaggaccatcaggcccacctcgccacacatttgagactggacccttgcctagcaca
gagcctgggttccctggtctccaaggagaaagaggtcaaaaaggacatcagggcctcaaa
ggagtaaaaggagaccctgggttttgtgcttgcgaaggtgggacccccaacattggacca
catggggaaccaggcctgcctgggacacaaggtctcatcggccttcctggtgttaaagga
actagaggagatccaggctctaggggtgcacctggcccattggggactccggggttattt
ggatctagaggtcatacaggactcaaaggaaagaaaggagaaccaaccatcagtagagga
tctaaactgtcaggggacaaaggtgatcctggcccccaggggaccccaggaatggcagga
gctccaggcaggaatggaataccaggtttaccaggcctcccaggcattccgggagatagt
ggatctggcttcccaggagaaaaggggtcaccaggacttcccggtgaaaagggacatgat
ggtccaactggaccaccaggaattgggctgccaggacttcctgggccccgtggacttcct
ggagataaaggagtagatgggttgccggggcaacaaggtttccgtggagctcaaggagtc
accttgccttgtattatccctgggtcgtatggtccatcaggatttcctggagctcctgga
ttcccaggctctaaaggagctcggggcctccctggaattccaggcaagcctggcgctcat
ggaagtaaaggaaagcccggaagtccggggttaattcatctcccaggactgccaggattt
cctggacctcgtggggagaagggattgcctgggtttcctgggcttcctggaaaagatggc
ttgcctggaaaggctggcagtccaggtttaacaggttccaagggagccactggtgacatc
tttggtgccgaaaatggtgcttcaggggagcaaggcctacagggattgccaggggacaaa
ggatttcctggagactctggccttccgggacccaagggtttgaatgggaagtctggtatg
ctaggccccaaaggtgagaggggcaaccctggatcaccaggatcaccaggacagccagga
cccacagggtctagtgatccacttggcatcaagggcgcatctggactcccaggagcacca
ggccttccaggcatttcagggcaatctggaaaaaagggtcaaagaggcaacataggtcaa
cccgggtcaactggaaaacgaggtcttcctggaataaaaggccttcctggttctcaaggg
tcagctggtttcctgggaagcccaggtttctcaggagtcactgggttgccaggcatccca
ggccaaaagggtgaacgggggtcctctggaccagtagggtttcccggattacctggcctt
cctggtatccctggagctgctggaataaagggatttcctgggtcatttggaaaggtggga
caacctggacagactggtagtccaggtgaaaaaggagacagaggggatccagggtcaatc
ggagtatccggcccaagacctccaatgctgaacctttggttcaaaggagaaaaaggctcc
cgaggttctactggatctgatggatttcctggacctagaggtgacaaaggagagcctggc
atcccagggttaccaggccaaccaggagctcctggacagtccagtaccatcaaaggactc
agtgggagcccaggttcccctggatctgtaggaagaatcggattacccggcctgaagggg
tccctagggattacaggtttcccaggaatgccaggaaagagtggttctcaaggtcgcatt
ggaacttctggttccctgggagcaactggtatcccaggtataaaaggagatcaaggccaa
acaattggcattcctggaagtccaggacccaagggacagcctggtgaactgggctttaaa
ggtgtaaaaggaaaagatgggctagttggtgacagaggttacccagggaacaaaggtgat
gatggaaaagttggtattgcaggagatcctggtcttcctggctccccaggacttcaaggg
atttcaggcatgagaggagacctaggcctcccaggctccccaggccatctggggtcaata
ggccgccctggaccctctggcttaataggacctaaagggttctctggacctcctggttta
catggactgaatggacttccaggcaccaagggtacccatggaactccaggagccagtatc
actggtgttcccgggtctgctggtatgcctggtcccaaaggggaaaagggaatgtcagga
attgtcatcggagatccaggaaaacaaggttcaaggggacaaaaaggtgaccgaggtttg
ccaggtctccaaggtcctgctggtctccccggagccccaggcatctccttgccctcagtc
atagcaggacagcctggtgaccccgggcgcccaggcctagatggagaacgaggccgccca
ggccttccaggacctccaggtcctcctgggccatcctcagaccaaggcgactctggagat
cctggcttccctggaattccaggccttcaagggctcaagggaaaccaaggacttccgggt
ttctctggcctctctggtgatctagggctgaaaggcataaaaggggagcctggccttatg
gggactcctggcaaggtcgggccaccaggagacccgggatttcctgggatgaaggggaag
gcggggccaagaggcttttccggcccccagggtgctccaggacacacaccaatttctgaa
gctatccaggttcctccagggcctccgggtcttccaggcattgatggcatccctggcctc
gctggagaacctgggcctcaaggttctgtgggtctgcaaggttctaaaggtctccctggc
atccctggcaaggatgggcccagtgggcttccaggcccacctggagtccttggtgatcct
ggtctcccaggactacaaggacctccaggatttgaaggagctccagggcaacagggtccc
tttgggaggcctgggatgcctgggcacaatgtgagagtgggctacacactggtcaaacac
agtcagtcagaacaggtgccactgtgcccagtcgggatgagccggctgtgggtgggttac
agcttgctgttcgtggaggggcaggagaaagcccataaccaggacctgggatttgctggc
tcctgcctgccccgattcagcaccatgcccttcgtctactgcaacatcaatgaagtgtgc
cactatgccagacgcaatgacaaatcctactggctctctactactgcccccattcccatg
atgcctgtgggccagacccagattccccagtacatcagccgctgctctgtatgtgaggca
ccgtcacaagccattgctgtgcacagccaagacatcaccatcccccaatgccctttgggc
tggcgcagcctctggatcggttactccttccttatgcacactgctgctggagctgagggt
ggaggtcagtccctagtctcccctggctcctgcctcgaggactttcgggctacccctttc
attgagtgcagcggcgcccgtggtacctgccactattttgccaacaagtacagtttctgg
ctgacgactgtggaggagagacggcaatttcgggaagagcctgtttctgagacactgaaa
actgggcagctccacaccagggtgagccgctgccaggtgtgtatgaaaaatctgtag
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integrated database retrieval system
