Cricetulus griseus (Chinese hamster): 100772924
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Entry
100772924 CDS
T02813
Symbol
Utp20
Name
(RefSeq) small subunit processome component 20 homolog isoform X1
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
cge
Cricetulus griseus (Chinese hamster)
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cge03009
]
100772924 (Utp20)
Ribosome biogenesis [BR:
cge03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100772924 (Utp20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
100772924
NCBI-ProteinID:
XP_027248380
UniProt:
A0A061IQU7
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All DBs
Position
1
Genome browser
AA seq
2786 aa
AA seq
DB search
MKPKPLSHKTENTYRFLTFAERLGNVNIDIIHRIDRTASYDEEVETYFFEALLKWRELNL
TEHFGKFYKEVIDKCQSFNQLVYHQNEIVQSLKTHLQIRNSFAYQPLLDLVVQLARDLQT
DFYPHFEDFFLTVTSILETQDTELLEWAFTSLSYLYKYLWRLMVKDMSKIYSMYSTLLAH
KKLHIRNFAAESFTFLMRKVSDKNALFNLMFLDLNEHPEKVEGVGQLLFEMCKGVRNMFH
SCTGQALKLILQKLGPVTETETQLPWILVGETLKNMAKSTVVYIYKEHFGIFFDCLQESL
LELHNKVTEKNCCENSEQMSRLLETFLILVKHGSGSKITRPSDICRVLSEALQTDNLSTS
CRKTLLDVVSALLLAENVSLPETLIKEIIEKIFESKFERRLIFDFSEVMFTMKQFEQLFL
PSFLCYIENCFLIGDSVVCNEALAILAKLILNKAAPPTAGSMAIEKYPLVFSQQTVGSYL
QQRKTDSKRRKEQSTVLDHLLAIVQSPPNKDTTYLSRSWAALVVLPHIRPLEKEKVLGLL
SCFIDSLFMAVDKGSFGKGSLFVLCQAVNTLLSLEESSELLHLVPVERVKSLVLTFPAEP
SVLLLADLYYQRLALCGCKGPLSEKALMELFPKLQANISTGVSKIRLLTIRILNHFDIQL
PASMEDDGLSERQSAFAILRQAELVPATVSDYREKLLHLRKLRHDVVQDAAPQGPLQEVP
LRYLLGMLYVNFSALWDPVIELISSHAHGMENKQFWSVCYEHLEKAAAHAEKELQKDMRE
AEQSTGDGSWEQAQEGDVGALYQQQLALKTDCRERLDHTNFRFLLWRALAKFPERIEPRS
RELSPLFLRFINNEYYPADLQVAPTQDLRRKGRGAVAEVMEEEPAVEADEELEEEALPTD
EAPQKKKTRRAAAKQLIAHLQVFSKFSNPRALYLESKLYELYLQLLLHQDQAVQKITLDC
IMTYKHPHILPYRENLQRLLDDRSFKEEIVHFSISEDNTVVKATHRADLFPILMRILYGR
MKNKTGSKTQGKSASGTRMAIVLRFLSGTQPGEIQLFLDLLSEPVKHFKNGECHSAVIRA
VEDLDLSKVLPVGRQHGILNSLEVVLKTISHLISEYLPKILQILLCMTATVSHILEQREK
IQLRFINPLKNLRRLGIKMISDIFLDWESYQFRAEEIDAVFHGAVWPQICRLGSESQYSP
TPLLKLISIWSRNARYFPLLAKQKPGHPECDILTNVFAVLSAKNLSDATAGIIMDIVDDL
LNLPDFEPTETMLSLPVTDCVYAEVADNTEPITVGGRLILPHVPAILQYLSKTTVSAEKV
KKKKNRAQVSKELGILSKISKFMKDREQSSLLITLLLPFLLRGNVAQDTELDILVTVQNL
LQHCQDPTSFLKPLAKLFSVIKNKLSRQLLCTVFQSLSGFESELKYITDIVKLNAFDKRH
LDDINFDVRFSAFQTITSNIKEMQTVDADYLVPVMHNCFYNMELGDMSLSDNASMCLTSI
IKKLAALNVTEKEYKEIIHRTLLEKLRKGLKSQTESVQHDYTMILSCLIQTFPNQVEFKD
LVQLTHSHDPEMDFFENMKHIQIHRRARALKKLAKQLLERQVVLSSKSLQNYIMPYAMTP
IFDEKMLKHENIIIAATEVIGAICRHLSWPAYVYYLKHFIHVLQTGQINQKLGVSLLVMV
LEAFHFDYKTLEEQMGSVQDEENTVEMAELLEHEAMELEHVDEEEKEPARKSLSDEKEPL
KTPDSGSIAATEQECISKSVSFLPRNKEELERTIKTIQGAITGDILPRLHKCLASATKRE
EEHKLVKSKVVNEEEVVRVPLAFAMVKLMRSLPQEVMEANLPSVLLKVCVLLKNRAQEVR
DIARSTLSKIIEDLGVRFLQYVLKELQTTLVRGYQVHVLTFTVYTLLQGLTNKLQVGDLD
PCLQIMTEIFNHELFGALAEEKEVKQILSKVMEARRSKSYDSYEILGKFVGKDQVTKLIL
PLKEILQNTTSLKLARKVHETLRRIIAGLIVNPDMTAESLLLLSYGLVSENLPLLTEKEK
KPAAPAPDARLPPQSCLLLPPTPVRGGPKAVVSKKTNMHIFIESGLRLLHLSLKTSKIKS
SSEHVLEMLDPFVSLLINCLGARDVKVITGSLQCLIWVLRFPLPSIESKAGQLTKHLFLL
LKNYARLGAARGQNFHLVVNCFKCVTIVVKKVKSYQITEKQLQVLLAYAEEDIYDTTRQA
TAFGLLKAILSRKLLVPEIDDIMRKVSKLAISAQNEPARVQCRQVFLKYILDYPLGEKLR
PNLEFMLAQLNYEHETGRESTLEMIAYLFDTFPQGLLHDTCGMFFIPLCLMMVNDDSAMC
KKMASMAIKSLLSKVNLEKRDWLFGLVTSWFEAKKRLNRQLAALTCGLFVESEGVDFERR
LGTLLPVIEKEINPENFKDIIEEVEEKAADRLLFGFLTLISKLIKECNIIHFTKPSETLN
KIWSHVHSHLRHPHNWVWLTAAQIFGLLFASCQPEELIQKWKNKKTKKKPTEPVAVRFLT
SDLDQKMKSISLASCHQLHSKFLDESLGEQVVKNLLFIAKVLYLLEPDSGNKLGESKGME
EQDTLGGALAREAAEDEAGTDGKMELDREEKEEPSKSATLLWLIQKLTRTAKLEAAYTPR
NPLKRTCIFKFLGAVAVDLGVDRVQPYLPVIIAPLFRELNSTYSEQDPLLKNLSQEIIEL
LRKLVGLESFSLAFASVQKQASEKRALRKKRKALEFVTNPDVAAKKKLKKHKNKSEAKKR
KIEFLRPGYKAKRQKSHSLRDLAIVE
NT seq
8361 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccaagccgctttcccacaagacggagaacacgtaccggtttcttacatttgct
gaaagactggggaatgtgaacattgatatcatccaccgtattgatagaactgcaagctat
gatgaggaggttgaaacctacttcttcgaggctctgctgaagtggagagagctgaatctt
acagagcatttcggaaaattttacaaagaagtcattgataaatgccaatcttttaaccag
ttggtctatcatcaaaatgaaatagttcagagcttgaagactcacctgcaaattaggaac
agttttgcctaccaacctcttttggatttggtagtacagttggcacgagatctgcagact
gatttctatccgcactttgaagacttcttcctgacagttacctccatcctggagactcag
gacacagaactgttagaatgggctttcacctcactgtcgtatctgtacaagtacctgtgg
agactgatggtgaaggacatgtccaagatatacagcatgtacagtaccctcttggctcat
aaaaaactacacataagaaactttgctgctgaaagttttacttttttaatgagaaaggtt
tctgataaaaatgcacttttcaatttaatgttccttgatcttaatgagcatccagaaaaa
gtggaaggagttggacagttgctctttgagatgtgcaaaggagtcagaaatatgtttcat
tcctgtacaggccaggcgttaaagctcattttgcaaaagctaggaccagttactgaaaca
gaaactcaactaccatggattttagttggggaaacactgaaaaacatggccaaatccact
gtagtctatatctataaggaacattttggtatattttttgactgtttgcaagaatcactc
ctggagctccacaacaaagtgacagaaaaaaactgctgtgaaaactctgaacagatgagc
cggctgctggaaacattcctgatccttgtgaaacatggaagtgggtcaaaaataaccagg
ccttctgacatctgtagggtgttgtctgaagcattacaaacggacaatctttctacatct
tgccggaagaccctcttggatgtggtttctgctttgcttctagctgaaaatgtttcctta
ccggagaccctcatcaaagaaatcatagaaaaaatatttgaaagcaaatttgaaagacgt
ttgatctttgatttttctgaagtcatgtttactatgaagcagtttgaacagctttttcta
ccgagctttctctgttacattgagaattgcttcttgataggcgactctgtggtctgcaac
gaagcgctggccattttagctaagctcatcctgaacaaggctgctccacctactgctggc
tccatggccattgaaaaataccctctggttttctcacaacagactgtgggatcctacttg
cagcagaggaagactgactctaagagaagaaaggaacagtctacagtactagaccatctc
ttagccatagtccagtcacccccaaataaagataccacttacctttctcggtcttgggca
gccctggtggtattgcctcatattagacctcttgagaaagaaaaggtactaggtctcctg
tcgtgcttcatagactcactcttcatggctgttgacaaggggagctttggaaaagggagc
ttatttgttctttgtcaagctgtaaatactctgctgagtttggaagagtcttctgaactt
cttcatctggttcctgtggagcgggtgaagagcttagtgttaacatttccagcggagcca
tctgtgttgctgttggctgatctctattaccagagactagcgttatgtggatgcaaaggg
ccactttctgagaaagctttaatggagttatttcccaagttacaagcaaacatttcaact
ggtgtctccaagattcggctcttgacaataaggatcctaaatcattttgatatccagctt
ccggcttcaatggaggatgacggactctcggagcggcagtcagcctttgctatcctacgc
caggcagaactggtgccagcaactgtgagcgactacagagagaagctcctccacttgaga
aagctgaggcatgatgtggtgcaggatgcagcccctcagggaccactacaggaggtacca
ctccgttatctgttaggcatgctctatgtcaacttcagtgctctctgggaccctgtgatt
gagctcataagttctcacgcccatgggatggaaaacaagcaattctggagtgtctgctat
gaacatctagaaaaagcagctgcacatgctgagaaagaactgcagaaggatatgagagag
gcggagcagtccactggggatggaagttgggagcaagcccaagaaggagatgttggtgca
ctttaccagcagcagttagcattgaaaactgactgtcgagaacgactggaccataccaac
ttccgtttcttgctctggcgagctttggccaaatttccagagagaatagagccaaggtcc
agggaactctccccactgttcttgaggtttatcaacaatgagtattatccagcggatctg
caagttgctccaacccaggatctacgcagaaaaggcagaggagcagtggctgaggtaatg
gaggaggaacctgctgtggaagccgacgaagaactggaggaagaggccctgcccacagat
gaagcaccccagaagaaaaagacaagaagggctgcagctaagcagttaattgctcatttg
caagtcttctctaagttttcaaacccacgggccttatatctagaatccaagttatatgaa
ttatatcttcagttattgctacaccaagatcaagctgttcaaaaaataaccttggattgc
ataatgacctacaaacaccctcatatcctcccttacagggagaatttacaaaggctgctg
gatgacagaagctttaaggaggagattgtacacttcagcatttcagaagacaacactgtt
gtgaaagccacccaccgggcggatttgtttccaattctgatgagaattttgtatgggcgg
atgaagaataagacagggagtaaaacccaagggaaatctgcttcaggcacccgaatggcc
attgtcctgcggttcctctctgggacccaacctggagagatccagttattcttagatctg
ctgtctgagcctgtgaagcacttcaagaatggggagtgccattcagcagtcattcgggca
gtagaggatttggatctgtcaaaggtacttcccgtgggtcgtcagcatggcatcttaaac
agcctggaggttgtcctgaagaccatcagtcatctcatcagtgagtaccttcccaagatt
ctgcagattctgctgtgtatgacagccaccgtctcacacatccttgagcaacgggagaag
atacagctaaggtttattaacccactgaaaaatttaagacgtctgggaatcaagatgatt
agcgatatatttttggattgggaatcctatcagttcagagcagaagaaattgatgccgtg
tttcatggtgcagtttggcctcagatctgcaggcttggatctgagagtcagtattcgccc
actcctctgttgaagctaatcagtatctggagcagaaatgcaagatacttccctcttctg
gctaaacagaaacctggacacccagaatgtgatatcctgaccaatgtctttgcagttctc
tcagcaaagaatctatctgatgccacagctggcattataatggacatagtcgatgatctt
ctcaaccttccagattttgagcccacagaaacaatgctgagcttgccagtaactgactgt
gtgtatgccgaggtagcagacaatacagagcctatcactgtgggagggagactgattctg
cctcatgtgcctgcaattcttcagtatctcagcaaaaccacagtaagtgcagagaaggta
aagaagaagaagaacagggcacaagtcagtaaggaactcggcattctttccaagataagc
aagtttatgaaagacagagaacaaagttctcttctcattactcttctccttccgttcctt
ctccggggcaatgttgctcaggatacagagcttgatatcctggtgacagtgcagaacttg
ttacagcattgtcaggaccccactagcttcctcaaacctctggccaaactcttttcagtt
attaagaacaagttgtcaagacagttgttgtgtactgttttccagagtctgtctggtttt
gaaagtgaactaaaatatattacagacattgtaaagcttaatgcctttgataaaaggcat
ctcgatgacatcaactttgacgttcgattctcagcgttccagaccatcacctctaacata
aaggaaatgcagacggtggatgctgactaccttgtccctgtgatgcataactgtttctat
aatatggagttaggagacatgtctttaagtgacaatgccagcatgtgcttgaccagtatc
atcaaaaagctagctgctttgaatgttacagagaaagaatataaggagatcattcaccgt
acactcctggagaaactgaggaaaggattgaagagccagacagagagtgttcaacatgat
tataccatgatcctctcctgtttgattcaaacgtttcccaatcaagtggaatttaaagac
ttggtgcagctcactcatagccatgacccggaaatggacttctttgagaacatgaagcac
attcagatccacagacgtgcaagagctttgaagaaactggccaaacaactcctggaaagg
caggttgtgctgtcttctaaatctcttcagaattacatcatgccttatgccatgactcct
atttttgatgagaaaatgctcaagcatgaaaatataattattgctgccacagaggttatt
ggagctatttgcagacacctgtcttggccagcatatgtgtattacttgaaacatttcatc
cacgtcttgcagacaggccagatcaaccagaagctaggcgtcagtttattggtgatggtg
ttggaagcgttccattttgactacaaaactcttgaagaacaaatgggaagtgttcaggat
gaagaaaacacagttgaaatggctgaattactggaacatgaagccatggaattggagcat
gtggatgaggaagaaaaggaaccagcccgtaagagtttgtcagatgaaaaggagccactg
aaaacccccgattctggtagcatagcagctacggaacaagagtgcatctccaagtctgtc
tctttccttcctcggaataaggaagagttggaaagaacaattaaaaccatccagggagcc
ataactggggatatcctccccaggctgcacaagtgcctggcatctgcgaccaagagggaa
gaagaacacaagctggtcaagtcaaaggtcgtgaatgaggaggaagtagtccgagtcccc
ttggcttttgccatggttaagctgatgcggtcactcccacaggaggttatggaggcaaat
ctgcccagtgttttgctgaaagtgtgtgtcctcctcaagaacagagcacaggaagtcaga
gacattgcccgcagtactctctccaaaataattgaggacctgggtgtgcgctttctgcag
tatgtcctcaaagagttacagacaacccttgtccgaggctatcaggtccacgtgctcact
ttcactgtttacacattgctgcaaggcctcaccaacaagctgcaagttggggatttagac
ccttgtctacaaataatgactgagatttttaaccatgaattgtttggtgcccttgctgaa
gaaaaggaagtaaagcagattctgtccaaagttatggaggctcgaaggagcaagagttac
gattcatatgaaatcctgggcaagtttgtcggaaaagaccaggtgacaaaacttattctt
ccattaaaagagatcctacaaaacaccacaagtttaaaacttgcccggaaagttcatgaa
accttgcgccgaattatagcaggattaattgtgaatccagacatgacagcagaatctctt
cttctgctcagctatggtttggtcagtgaaaatctgccgctgctaacagaaaaggaaaaa
aagccagcagcccctgcacctgatgcacgactaccaccccagagctgcctcctgctcccc
ccaactccagttcgaggtgggccaaaagctgttgtgagcaagaaaaccaacatgcacata
ttcatcgagtctgggcttcggctgctgcatctgagtctaaagacttccaagatcaagtct
tctagtgagcatgtgctggagatgttggacccttttgtgtcactcctcataaactgcctg
ggtgccagggatgtgaaggtgatcacaggctctttgcagtgcctgatctgggtcttgcgg
ttccctctgccttccatagaaagcaaagcaggacagctgacgaagcaccttttcctcttg
ctgaagaactatgcaagactgggggctgcccggggccagaacttccacctggtggtgaat
tgtttcaagtgtgtgaccatcgttgtcaagaaagtcaagtcataccagataactgagaaa
caacttcaggttctcctggcatatgctgaggaagacatttatgatacaacaagacaagcc
actgcatttggtcttctcaaggctatcttatcaagaaaattattggtcccggaaattgac
gatatcatgcggaaagtatccaagttggcaatttctgcacaaaatgagcctgccagggtg
cagtgcagacaggttttcctgaaatatatccttgactatccccttggtgagaaattgaga
ccaaacttggaattcatgctcgctcaactgaattatgaacacgagactggaagagaatcc
accttggaaatgattgcctatctctttgacaccttccctcagggactgctccatgacacc
tgcgggatgttcttcatccctctttgcctaatgatggtcaacgatgactctgccatgtgc
aaaaagatggcatccatggccattaaatccttgctcagcaaggtcaaccttgagaagaga
gactggctgtttggtctggttacctcctggtttgaagcaaaaaagcgattaaacaggcag
ctagctgccctgacctgtggcttgttcgtggaaagtgaaggagttgattttgagagaagg
cttggaacgcttcttcctgtgattgaaaaggagattaatcctgaaaactttaaagatatc
atagaggaggtggaagaaaaagctgcagatcgcctgctgtttggttttctcacactgata
agtaaactcatcaaggaatgtaacatcattcacttcaccaagccctcggagactttgaat
aaaatctggagtcatgtacactctcacctcagacatccgcacaactgggtatggctcaca
gcagcccagatttttggattgctctttgcatcttgccaaccagaagagctcattcaaaaa
tggaaaaacaaaaagaccaaaaagaagcccacggagcctgtagcagtcaggttcctaaca
agtgaccttgatcagaagatgaagagtatctctctggcttcatgccatcagctgcattcc
aaattcttagatgaatccctaggagaacaggttgttaagaacttgttgttcatagcaaaa
gtcttatatttactggaacctgattctgggaacaagctaggagagtcaaaaggcatggaa
gaacaggacacattgggaggtgctctggccagagaagcagcagaagatgaggctggtacg
gatgggaaaatggagttggacagagaagagaaggaagagcccagcaagtcagccacactg
ctgtggctgatccagaagctgacccggacggctaagctggaagctgcttatactcccaga
aaccccttaaagagaacctgcatctttaagttcctcggtgcagtggccgtggatcttgga
gtggaccgggtccagccctacctcccagtgattatcgcccctctgtttcgggaactcaac
agcacctattcagagcaagatcctttgctgaagaatctgtcccaggaaatcatagaattg
ctcagaaagctggttgggctcgagagcttctcactggcctttgcctctgtacagaaacag
gctagtgagaagagggctctccggaagaagaggaaggctctagagtttgtaaccaatcct
gatgttgctgccaagaaaaagttgaagaaacataaaaataaaagtgaagcaaagaaaaga
aagatagagttcctacgcccaggctataaggccaagagacaaaaatcccacagcctgaga
gacttagcaatagtggagtaa
DBGET
integrated database retrieval system
