Cricetulus griseus (Chinese hamster): 100773035
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Entry
100773035 CDS
T02813
Symbol
Usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100773035 (Usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cge03041
]
100773035 (Usp39)
Spliceosome [BR:
cge03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
100773035 (Usp39)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
100773035
NCBI-ProteinID:
XP_027285292
UniProt:
G3HPY5
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All DBs
Position
8:complement(64051206..64079162)
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AA seq
564 aa
AA seq
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MSSRSKRQSHGSTRGKRESESRGSSGRIKKERDREREPEAASSRGSPVRVKREAEPTARE
VPAPAPPAVRVKREREADEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDFE
KLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEI
IDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQ
ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ
AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSMRIFTKKLP
HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK
FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR
EYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQM
ITLSEAYIQIWKRRDNDETNQQGA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtctagccggtctaagcggcagtctcatggttccacccgcgggaagcgcgagtccgag
tcgcggggtagctcgggtcgcatcaagaaggagcgagaccgcgagcgggagccggaggcg
gcgagctctcggggcagtccggtccgcgtgaagcgggaagccgagccgactgcgcgagag
gtcccggcgcctgcgcccccggccgtgagggtgaagcgggagcgcgaggccgacgaggac
tcggagcccgagcgggaggtgcgagcaaagaatggccgagtggattctgaggaccggagg
agtcgtcactgcccatacctggataccattaacaggagtgtgctggacttcgactttgag
aaactctgttctatttccctctcacatattaatgcatatgcctgtctggtgtgtggcaag
tactttcaaggccggggcttgaagtctcatgcctacatccacagcgtccagttcagccac
cacgtcttcctcaacctccatactctcaagttttactgccttcctgacaactatgagatc
atcgattcctcactggaggatatcacatacgtgttgaagcctactttcacaaagcagcaa
attgcaaacttggacaagcaagccaaattatcccgggcatatgatggtaccacttacctg
ccagggatcgtggggctgaacaacataaaagccaacgactatgcaaatgcagtgctgcag
gctctgtcaaatgtccctcctcttcggaactactttctggaggaagacaattataagaac
atcaagcgccctccaggggatatcatgttcctgttggtccagcgttttggcgagctgatg
agaaaactctggaacccccgaaacttcaaggcacatgtttctcctcatgagatgcttcag
gctgttgtgctttgcagcaagaagactttccagatcaccaaacaaggggatggagttgac
ttcctgtcttggtttctgaatgctctgcactcagctctgggcggcaccaagaagaagaag
aagactattgtgactgatgttttccaggggtcaatgagaatattcaccaaaaagcttcct
catcctgatctgccagcggaagagaaagagcagctgctccataatgatgagtaccaagag
acaatggtggagtccacgttcatgtacctgacactggaccttcccactgccccactctac
aaggatgagaaggagcagctcattatcccccaggtgccgctcttcaacatcctggccaag
ttcaacggcatcaccgagaaggaatacaagacttacaaggagaacttcctgaagcgcttc
cagctcaccaagctgcctccatatctaatcttttgcatcaagagatttactaagaacaac
tttttcgtggagaagaatccgacaattgtcaacttccctatcacaaatgtggatctgaga
gaatacttatctgaagaagtccaagcagtccacaagaacaccacttatgatctcattgcc
aacattgtgcatgatggcaagccctccgagggctcctacaggatccacgtgcttcaccat
ggcaccggcaagtggtatgaattacaagaccttcaggtgactgacatcctgccccagatg
atcacattgtccgaggcatacattcagatttggaagaggcgggataatgatgaaaccaac
cagcagggggcttga
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