KEGG   Cricetulus griseus (Chinese hamster): 100773283
Entry
100773283         CDS       T02813                                 
Symbol
Optn
Name
(RefSeq) optineurin isoform X1
  KO
K19946  optineurin
Organism
cge  Cricetulus griseus (Chinese hamster)
Pathway
cge04137  Mitophagy - animal
cge04140  Autophagy - animal
cge05014  Amyotrophic lateral sclerosis
cge05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:cge00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100773283 (Optn)
   04137 Mitophagy - animal
    100773283 (Optn)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100773283 (Optn)
   05022 Pathways of neurodegeneration - multiple diseases
    100773283 (Optn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cge04131]
    100773283 (Optn)
Membrane trafficking [BR:cge04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    100773283 (Optn)
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    100773283 (Optn)
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    100773283 (Optn)
  Xenophagy
   Cargo receptors
    100773283 (Optn)
SSDB
Motif
Pfam: CC2-LZ NEMO zf_C2H2_10 Zn_ribbon_CLPX_N
Other DBs
NCBI-GeneID: 100773283
NCBI-ProteinID: XP_027260987
UniProt: A0A9J7FNB9
LinkDB
Position
3
AA seq 573 aa
MSHQPPSCLTEKGDSLCETPGNEPPNKVHPSLDTFTPEEMLQQMKELLVENHQLKEAMKL
NNQAMKGRYEELSAWAEKQKEERQLFDTQNKEAKKLLMTLSYENEKLKVELGKLREKSER
PFEGSICGSRPPMEDLEQEVEQLKIQVMRLKAEKADLLGIVSELQLKLNSSGSSEDSFVE
IRMAEEEAEGAMKEMKSSPIPRRTYFTSMTKSTEDARTCVEFEELTVSQLLLCLREGNQK
VRRLEFALREAKERIAEFEKKANDRSEIGTQTEESLEEDEDYKDPESVGSEVETLKVGVT
ALYKELQEAHTKLSEAELMKKRLQEKCQALERKNSATPSELSEKQELVYSNKKLELQVES
MRSEIKMEQAKTEDEKSRLATLQSTHIKLLQEHNSALKTIEELTKKQAEKVDKMMLQELH
EKLELAERALASKQLQMDQMKQIIAKQEENLETMAVLRAQMEVYCSDFHAERAAREKIHE
EKEQLALQLAILLKENNDFEDGGSRQSLMEMQSRHGARTSDSDQQAYLLQRGAEDMSWSQ
QQPQNIPIHSCPKCGEILPDIDTLQIHVMDCII
NT seq 1722 nt   +upstreamnt  +downstreamnt
atgtcccatcaacctccgagctgcctgactgagaagggtgacagcctctgtgagacccca
ggaaatgaaccccctaataaggttcaccccagcctggacacattcactcctgaggagatg
ctgcagcaaatgaaggaactcctggttgagaaccaccagctgaaagaagccatgaagcta
aacaatcaagccatgaaagggagatatgaggagctttcagcctgggcagagaagcagaag
gaagaacgacagttgtttgacacacagaacaaagaagctaagaagctcctgatgaccttg
agttatgaaaatgagaaactgaaggtggagcttggaaaactaagagagaagtcagaaagg
ccatttgaaggctccatatgtggctccaggcctcccatggaagacttagaacaggaagtg
gagcagctgaagatccaggtgatgcgccttaaagctgaaaaggctgacctgctgggcatc
gtctcagaactgcagctcaagctcaactccagtggctcctcagaggactcctttgttgag
atcaggatggctgaagaagaagctgaaggggcaatgaaggaaatgaagagcagtcctata
cctaggaggacatacttcaccagcatgaccaaatctacagaagatgccaggacttgtgtg
gagtttgaggaattaactgtgagccaactcctgctttgcctaagagaaggaaaccaaaag
gtgcgaagacttgaattcgcactcagagaagccaaagaaagaattgcagagtttgaaaag
aaagcaaatgaccgttctgagattgggacccagacagaggagagcttagaagaggatgaa
gattacaaagacccagaaagtgttggaagcgaagtggaaacattgaaagttggagtgaca
gctctgtataaggaacttcaagaggcacacacgaaactcagtgaggctgagctaatgaag
aagagacttcaagaaaagtgccaggctctggaaaggaagaactctgccaccccatcagaa
ctgagtgagaagcaagagcttgtttacagcaacaagaagttagagctgcaggtggagagc
atgcgctctgaaatcaagatggaacaagctaagacagaggatgaaaaatccaggttagcc
actctgcagtcaacacacatcaagcttcttcaagaacataatagtgcactgaaaacaatt
gaggaactaaccaaaaaacaggcagaaaaggtggacaagatgatgctgcaagagctccat
gaaaagctggagctggcagagcgggctctggcatccaagcagcttcagatggaccagatg
aagcagatcattgctaagcaagaggagaacctggaaaccatggctgtcctcagggctcag
atggaggtgtactgttcagatttccatgctgaaagagcggcaagagagaagattcatgaa
gaaaaggagcagctggccttgcaactggcaattttgctgaaagagaacaatgactttgag
gatggaggcagcaggcaatccttgatggaaatgcagagccggcacggggcaagaaccagt
gactctgaccagcaggcttacctgcttcaaagaggagctgaggacatgagctggagtcag
cagcagcctcagaatattccgattcactcttgccccaaatgtggagaaattctgccggac
attgacacattacagatccatgtcatggattgcatcatttga

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