Cricetulus griseus (Chinese hamster): 100773428
Help
Entry
100773428 CDS
T02813
Symbol
Rc3h2
Name
(RefSeq) roquin-2 isoform X2
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
cge
Cricetulus griseus (Chinese hamster)
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cge03000
]
100773428 (Rc3h2)
04121 Ubiquitin system [BR:
cge04121
]
100773428 (Rc3h2)
Transcription factors [BR:
cge03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
100773428 (Rc3h2)
Ubiquitin system [BR:
cge04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100773428 (Rc3h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_4
Xin
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
100773428
NCBI-ProteinID:
XP_027279332
UniProt:
A0A9J7JWK1
LinkDB
All DBs
Position
6:complement(148602541..148662889)
Genome browser
AA seq
1187 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQSIKLNNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKMSATVRTFPLLNKVGVNSTVTSTAGNGIPVI
GSTETSGKIVPSTNGISNAENSVSQLIPRSTDSALRTLETVKKVGKVGTNGQSTAGPSAE
SVSENKISSPPKTPVSNAAATSAGPSNFGTELSSVPPKSSPFLTRVPVYPQHSESIQYFQ
DPRTQIPFEVPQYPQAGYYPPPPTVPTGVTPCVPRFVRSNNVPESSLPPASMPYADHYST
FSPRDRMNSSPYQPPPQQYGPVPSGMYAPVYDSRRIWRPAMYQRDDIIRSNSLPPMDVMH
SSVYQTSLRERYNSLDGYYSVACQPPNEPRTTVPLPREPCGHLKTGCEEQIRRKPDQWAQ
YHTQKAPVSSTLPVATQSPTPPSPLFSVDFRTDVRKFSESVSGTKFEEDHLSHYSPWSCG
TIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRTKEEDPIIPFSDGPII
SKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSSYGNEATSSA
HYIERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLDEGR
HLTLNLLSKEIELRNGESDYTEDTVDTKPDRDIELELSALDTDEPDGQSEQIEEILDLQL
DISSQSDQLLNGTAMENGHPGQHHQKDTVKQKRQSLGEDHVILEEQKTVLPVTSCFSQPL
PVSISSAGCLPIATSVSVGNLILKTHVMSEDKNDFLKPIANGKMVNS
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcaatggacagagtttctgtcctgtccaatctgctataatgaa
tttgatgagaatgtgcacaaacccatcagtttaggttgttcacatacagtttgcaagacc
tgcttgaataaacttcaccgaaaagcgtgtccttttgaccaaactgccataaacacagac
attgatgtgctccctgtcaactttgcacttcttcaattagttggagcccaggtaccagat
catcagtcaataaaattaaataatctaggtgagaataaacactatgaagtggcaaaaaaa
tgcgttgaagatttggcactctacttaaaaccactaagtggcggtaaaggtgtagctagt
ttgaaccagagtgccctgagccgtccaatgcaaaggaagctagttactctcgtaaactgt
caactggtggaggaagaaggtcgtgtcagagctatgcgagctgcccgttcactaggagaa
agaactgtgacagaactgatcctgcagcaccagaaccctcagcagctgtctgccaacctg
tgggctgctgtcagggctcgaggatgccagtttttagggccagctatgcaagaagaagcc
ttgaagttggtgttgctagcattagaagatggttctgccctctcaaggaaagttttggta
ctttttgttgtgcagagactggaaccaagatttcctcaggcatcaaaaacaagtattggt
cacgttgtgcagctactgtatcgagcttcttgttttaaggttactaaaagagatgaagac
tcttccctgatgcagttaaaggaggaatttcggagttatgaagcactgcgcagagaacat
gatgcccaaattgttcatattgccatggaagcaggactccgtatttcacctgagcagtgg
tcctcactgctatatggggacttggctcataaatcacacatgcagtctatcattgataag
ctacagtctccagaatcatttgcaaagagtgtccaagaattgacaattgttttgcaacga
acaggtgacccagctaatttaaatagactgaggcctcatttagaacttcttgcaaatata
gatcctaatccagatgctgtttcaccaacttgggaacagctagaaaatgcaatggtagct
gttaaaacagtggttcatggtcttgtggacttcatacaaaattacagtagaaaaggccat
gagacaccccagcctcagccaaacagcaagtataaaactagcatgtgccgagacttacga
caacaggggggttgtccacgaggaacaaattgtacatttgcccattctcaggaagagctt
gaaaagtaccgattaaggaacaaaaagatgagtgcaactgtaagaacgttccctcttctg
aataaagttggtgtaaacagcactgttacatccacagctggaaatggcattcctgtcata
ggaagtactgaaacatctgggaaaattgttccaagtacaaatggaatttcaaatgcagaa
aacagtgtttcccagctaattccacgaagcactgacagtgcattaaggactctggagact
gtgaagaaagtcgggaaagttggcactaatggccaaagtactgctgggccctctgcagag
tctgtatctgaaaataaaattagttctccacccaagactcctgtaagtaatgcagcagct
acctccgctgggccctctaattttggaacagagctgagctccgtgcctcccaaatccagc
ccatttctaactagagttccagtatatcctcagcattctgaaagcattcagtattttcaa
gatccaaggactcagataccctttgaagtcccacaatacccacaagcagggtactaccca
ccacctccaacggtaccaactggtgtgactccttgtgttcctcgatttgtgaggtccaat
aatgttccagagtcctcccttccacctgcttccatgccatatgctgatcattacagtaca
ttttcccctcgagacagaatgaattcttctccttaccagcctcctccgcagcagtatgga
ccagtaccttctggaatgtatgctcctgtgtatgacagcaggcgcatctggcgcccagct
atgtaccaacgagatgacattattagaagcaattctttacctccaatggatgtgatgcac
tcatctgtctatcagacatctttacgggaaagatacaactcattagatggatattactca
gtggcttgtcagccaccaaatgagccaaggacgactgtgcctttaccaagggagccttgt
ggtcatttgaagactggttgtgaggaacagataagaagaaagccagatcagtgggcacag
taccatacccagaaagcacctgtctcttcaactctgcctgtggctacacaatcaccaaca
ccaccttctcctctattcagtgtagacttccgaacagatgtaagaaagttctctgagagt
gtgagtggcacaaaatttgaggaagaccatctttcccattactctccctggtcttgtggc
accataggctcgtgtataaatgccattgattcagagcccaaagatgtgattgctaattca
aatgctgtgctaatggacctggacagtggggatgttaagagaagagtgcatttatttgaa
acgcagagaaggacaaaagaagaagacccaattattccctttagtgatggacccattatc
tcaaaatggggtgcaatttcccgatcctcccgaacaggttaccatacaacagatcccatc
caagccactgcttcccaaggaagtgcaactaagcccatcagtgtatcagattatgtccct
tatgtcaatgctgttgattcaaggtggagttcatatggcaatgaggccacatcatcagca
cactatattgaacgggacagattcattgttactgatttatctggtcatagaaagcattcc
agtactggagaccttttgagcattgaacttcagcaggccaagagtaactcattacttctt
cagagggaagctaatgctctggccatgcagcagaagtggaattccctggatgaaggccga
caccttactttaaatcttctaagcaaggaaattgaactaagaaatggagagagtgattat
acagaagacacagtagatacgaagcccgatagagatattgagttagagctttcagcactc
gatactgatgaacctgatggacaaagtgaacaaattgaagaaatcctggacctacaactt
gatatcagttctcaaagtgatcagttgctgaatggaacagcaatggaaaatggccatcca
ggtcaacatcaccagaaagacacagtaaagcagaagagacagagcttaggtgaagaccat
gtgattctggaggagcaaaaaacagttctgccagtaacgtcttgctttagccagccactc
ccagtatctattagcagtgcaggctgcctccccatcgccacatctgtcagtgttggcaac
ctcattctgaaaactcacgttatgtctgaagataaaaacgactttttaaaacctattgca
aatgggaagatggttaacagctga
DBGET
integrated database retrieval system
