Cricetulus griseus (Chinese hamster): 100774208
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Entry
100774208 CDS
T02813
Name
(RefSeq) LOW QUALITY PROTEIN: nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
cge
Cricetulus griseus (Chinese hamster)
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cge03009
]
100774208
03036 Chromosome and associated proteins [BR:
cge03036
]
100774208
Enzymes [BR:
cge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100774208
Ribosome biogenesis [BR:
cge03009
]
Eukaryotic type
Pre-60S particles
Helicases
100774208
Chromosome and associated proteins [BR:
cge03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
100774208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100774208
NCBI-ProteinID:
XP_035297289
UniProt:
A0A9J7GS89
LinkDB
All DBs
Position
3:148108624..148110881
Genome browser
AA seq
750 aa
AA seq
DB search
METLARERKTRKEKQKSKIEEATEGMEETASSKAKAVKKKGPSEDDMEPPKSKKTKKQEG
VPQDDSASKSKTSKKKKEPLEKKVAPAKTKEVKTEEPSEEDADVPKPKKMKKGKEANEDI
GEKSPKLKNGFSHSESNSTSNEAIGEENSSEAEKEIPVEQKEGAFSNFPISEETVKLLKA
HGVNFLFPIQAKTFHHVYSGKDLIAQSRTGTGKTFSFAIPLTEKLQGGLQDRKRCCAPLV
LVLAPTRELVNQVSKDFSDIIKKLSVACFYGGTPYGGQIEHMRSGIDILVGIPIRIKDHL
KNGKLDLTRLKHVVLDEVDQMLDMGFADQAEEFLCVAYKKDSEDNPQTLLISATCPHWVF
NVAKYYMKSTYEQVDLIGEKTQKAAITVEHLAIKCHWSERAAVIGDVISGRQGCAIIFYE
TKREAQALSQNTCIKQDAQSLHDDIPQKQREITLKGFRNGSFGVLVATKVAARGLDIPEV
DLVVQSCPPKDVESYIHRLGWTGRAGRTGLYICFYQHKEEYQLAQVEQKSGIKFKRIGVP
SATEIIKASSKDAIRLLDSVPPTAIGHFKQSAKKLLEEKGAVQALAAALAHISGATSVDP
RSLINSQVGFVTMILWCSIEMHNVSYAWKELKEQLGDSIDAKVRGVVFLKGKXGVCFDVC
TEAVIEIQEEKWHDSRRWQLTVATEQPDLEGPLEGYRSGRGQRDGSHGAFRGQRGGSRNF
RGQGQRGGGNRNFRGGNKGQKQSFSKAFGQ
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggagacgttggcacgcgagaggaaaactagaaaggagaagcaaaaatctaaaatcgaa
gaagcaacagaaggaatggaagaaactgcttcttctaaagctaaggcagttaaaaagaaa
ggtccttctgaagatgatatggagccccccaagtccaagaagaccaaaaagcaagaaggg
gtgcctcaagatgacagtgcttctaaaagcaaaacctccaagaagaaaaaggagcccctt
gagaagaaagtggcccctgctaaaaccaaagaggtaaaaactgaggagccttctgaggaa
gatgcagatgttcctaagcccaagaagatgaagaaagggaaggaagcaaatgaagacatt
ggagagaaaagccccaagctcaagaatggattctctcattctgagtcgaattccacctcc
aatgaagctattggtgaagaaaatagtagtgaggcagagaaggaaatacctgtggaacag
aaagaaggagctttctctaattttcccatatctgaagagactgtcaagcttctcaaagct
catggagtaaacttcctgtttcctatacaagccaagacattccaccatgtgtacagtggg
aaagacttaattgcccagtcacggacaggaactgggaagacattctcctttgccattccc
ttgactgagaagcttcagggtgggttacaagacaggaagagatgctgtgcccctctggtg
ctagttcttgcacctacaagagaattagtaaatcaagtgagcaaagacttcagtgacatc
atcaaaaagctatcagtggcttgtttttatggtggaactccctatggtggtcaaatcgaa
cacatgcggagtgggattgatatcctggttgggatcccaattcgtattaaagaccacctg
aagaatggcaagctagatctcaccagacttaaacatgttgtcctggatgaagttgatcag
atgttggatatgggttttgctgatcaagctgaagaattcttatgtgtggcatacaagaaa
gattctgaagacaacccccaaacattgcttatctctgcaacttgccctcattgggtgttt
aatgttgctaagtattacatgaaatctacatacgaacaggtggacctgattggtgaaaag
actcagaaagcagccataactgtggagcacttggccattaagtgtcactggagtgagagg
gcagcggttattggggatgtgatcagtggtcgtcaagggtgtgctatcatcttctatgaa
accaagagagaagcccaggcactgtcacagaatacatgcataaagcaggatgcccagtca
ttacatgatgacattccacagaagcaaagagaaatcaccctgaaaggtttccgaaatggc
agtttcggggttttggttgcaaccaaagttgctgcacgtggcttagacatccctgaggtt
gacttggttgttcaaagctgtccaccaaaagatgtggagtcctacattcaccgtttgggg
tggacaggcagagctggaaggacagggttgtacatctgcttttatcaacacaaggaagaa
taccagttagcacaagtggagcagaaatcgggaattaaatttaaacggataggtgttcca
tctgcaacagaaataataaaagcctccagcaaagatgccatcaggcttttagattctgtg
cctcctaccgctattggccacttcaagcaatctgctaagaagctgcttgaggagaaggga
gctgtacaggccctggcagccgcactggcccacatttcaggggccacatcagtcgacccg
cgctccttgatcaactcacaagtgggctttgtgaccatgatcctatggtgctccattgaa
atgcacaacgttagttatgcttggaaagaacttaaggagcagctgggagacagcattgat
gcgaaagtgaggggagtggtcttccttaaaggaaaanctggagtttgttttgatgtctgc
actgaagcagtcatagaaatacaggaggaaaagtggcatgattcaagacgctggcagctc
actgtggccacggagcagccggacctggagggacccctggaaggatatcgaagcggcagg
ggtcagcgggatggcagccatggtgcctttagaggacagcggggtggaagcaggaacttc
aggggacaggggcagcgaggaggaggaaatagaaacttcagaggtggcaacaaaggccag
aagcagagtttcagtaaagcgtttggtcagtga
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