Cricetulus griseus (Chinese hamster): 100774924
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Entry
100774924 CDS
T02813
Symbol
Scaf8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X4
KO
K13191
RNA-binding protein 16
Organism
cge
Cricetulus griseus (Chinese hamster)
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cge03021
]
100774924 (Scaf8)
03041 Spliceosome [BR:
cge03041
]
100774924 (Scaf8)
Transcription machinery [BR:
cge03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100774924 (Scaf8)
Spliceosome [BR:
cge03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100774924 (Scaf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
DUF3525
Motif
Other DBs
NCBI-GeneID:
100774924
NCBI-ProteinID:
XP_027256850
UniProt:
A0A9J7FGC2
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All DBs
Position
2:284439345..284563581
Genome browser
AA seq
1270 aa
AA seq
DB search
MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN
NVFKSEIIQPLLDMAAGIPPPVVTPVLASTTAAMSNTPGTPVTPVTPANVVQGLPDPWVS
QITNTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSILQALDAGLVVQLQALTAQL
TAAAAAANSLTPLDQGVSFNKKLMDRFDFGEDSEHSEESKKEMPTPQLSHVSESVNNSIF
HQIAEQLQQQNLEHLRQQLLEQQQPQKQVTPQDSQEGTFGSEHSASPSQGSSQQHFLEPE
ANLDDSIDIQQQDMDIDEGQDVVEEEIFEPEAKKVAVRSRSRTHSRSRSRSPRKRRSRSR
SGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPVRSKTLSVCSTTL
WVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDSFRALQKLSSGSYKI
GSKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDDLDGFAEGGMIDQETVNAEW
ETVKTSEPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPAVSLVPPAF
PVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPAIPPVVPTSLVQPP
LSMTPETVKDAGFGGLVLPGGSVASSLAPSALPAGNVFNPPNKAEPEEKVPHLTEHQIPS
AENTRPVIPNDIPSSAAMLAQPPGPANTSGILCVQRPNVSSNSEILGVRPANVSSSAAII
GAQPPNILNNSGILGIQPPNVSSGSGLLGVLPPNLPNNSGLVGLQPPNVTNPAGLMGTQP
PIGPQNLPPLTIPAQRVPALPMLDIRPGLIPQAPGPRFPLLQPGIPPQRGIPPPAVLDAA
LHPPPRGPFPPGDLFSQPERPFLAPGRPSLDNVPNPDKRIPLGNDSIQQEGDRDYRFPPV
ETREGINRPPPVDVRDVVGRPIDPREGPGRPPLDGRDHFGRAPVDMRENLGRPGLDHLGR
RDHFGFPPEKPWGLRDFDEREHRVLPVFGGPKGLHEERGRFRAGSYRFDPRSGPWNRGFG
QDVPRDFDDRRRPWERQRDRDDRDFDFCREINGNRLGRDRIQNTWVPPPHARVFDYFEGA
TSQRKGENVPQVNGENTERHAQPPPLPVQKDPELYDKLASSGDIDKEESGTVAGVESEAV
VVESTETEGT
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaagaccttcaacagcgagttatattcgctgaatgactataaaccaccc
atttctaaagcaaaaatgacccagattacaaaggcagccatcaaagccattaagttctat
aaacacgtggtacaaagtgttgagaaattcattcagaaatgtaaaccagaatacaaggta
cctggactgtatgttattgactccattgtgcgacaatcccgacatcagtttggtcaagaa
aaggatgtgtttgcacccagatttagtaataacatcattagcactttccagaatttatat
cgttgccctggggatgacaagagtaaaatagtgagagtattaaatttatggcagaagaat
aatgtttttaagagtgagattatccagcctcttcttgatatggcagcagggattcctccc
ccagttgtcactcctgttttggccagcaccactgcagctatgagcaataccccaggaacc
cctgtgactcctgttactccagccaatgtggtccaaggtttacctgatccatgggtatct
caaataacaaacacagacacactggcagctgttgctcagatcttacaaagccctcaaggt
cagcagcttcagcagctaatacagaccttacagatccaacagcagaagccccagccttcc
atcctgcaggccctggatgctggtcttgtggttcagttgcaggcactgacagcacagctt
acagctgcagctgcagcagccaactcgcttacacccttggatcagggagtctctttcaac
aagaagttgatggacaggtttgattttggggaagattctgagcatagtgaagaatccaaa
aaggaaatgcctactcctcaactttctcatgtctccgaatctgtgaacaactccatcttc
catcagatagcagagcagctgcagcagcagaacctggagcacctgcggcagcagctcctg
gagcagcagcagcctcagaagcaggtaactcctcaagacagccaggaaggaacatttggg
tcagagcactcagcttcaccctcacaaggaagtagccaacagcattttctggaacctgaa
gcaaatttagatgattctatagacattcagcaacaggatatggatattgatgaaggacaa
gatgttgttgaagaggagatttttgaaccagaagcaaagaaagtagctgttcgctcaaga
tcaagaactcattcacgatctcgatcaagatcaccaagaaaacgaaggtccaggtcacga
tctggctctcgaaagcgaaaacacaggaaacgatcccgttctcgctcaagagaacgaaag
agaaaatcatcacggtcgtattcaagtgaaagaagagccagagagagggagaaagaacgc
caaaaaaagggattgcctcccgtcagatcaaaaaccctgagtgtatgcagcactactctc
tgggttggccaagtggacaagaaggctacacagcaggatttaaccaaccttttcgaggag
tttggacagatagaatctattaatatgattccacccaggggctgtgcatatgtctgtatg
gttcatcgacaagattcatttcgggctcttcagaaactgagttcaggatcctataaaatt
ggctccaaggtcattaagattgcctgggctttgaacaaaggtgtgaagacggaatacaaa
cagttttgggatgtggatcttggagtcacatatataccctgggaaaaagttaaagtggat
gacttggatggctttgcagaaggaggcatgatagatcaggaaactgtaaatgctgaatgg
gaaactgtgaaaacctcagagcctgttaaagagacggtccagactacacagagtccaact
ccagttgaaaaggagacagtggtcacaacacaggcagaggttttccctcctcctgtggcc
atgctgcagattccagtagcgccagcagttcctgcagttagtttagttccaccagcgttt
cctgtgtcaatgccggttccccctcctggattcagcccaatccctccacctccttttcta
cgagcaagttttaacccttcacaaccacctcctggttttatgccacctccggttccccca
cctgtggtacctccccctgcaattccaccagtagtaccaacatctttggtgcaaccacca
ttgtccatgaccccagaaactgtgaaagatgctggatttggtggccttgtcttaccaggt
ggctctgtcgccagcagtcttgctccttcagctcttccagctgggaacgtttttaatcct
cccaataaagcagagcctgaagaaaaagtacctcaccttacagaacaccagattccttct
gctgaaaacaccagaccagtgattccaaatgatattccaagtagtgctgcaatgttagct
cagcctcctggccccgccaacacctctgggatcctgtgtgtgcagagaccaaatgtatca
agtaattctgaaattctgggggttcggccagctaatgtttccagtagtgctgcgattatc
ggagcccagccaccaaatattctgaataactctggaattttgggcatacagccaccaaat
gtttcgagtggctctggacttcttggagtactgcctccaaacttgcccaacaactctgga
cttgtaggactacagccaccaaatgttacaaatcctgctggacttatgggaacacagcca
ccgattggacctcaaaacttacctcccttaactatcccagctcaaagggtgcctgcattg
ccgatgttagacatccgtccaggactgataccacaggctcctggaccaagattcccttta
ctacagcctggaatacccccccagcggggtatccctcccccagcggtacttgatgcagct
cttcatccgccaccccgtggacctttccctccaggagatcttttcagtcagccagaaaga
ccttttctggctcctggaagaccaagtctagacaacgttcccaacccagataaacggata
ccacttgggaatgacagtattcagcaggaaggtgatagagactaccggtttcctcctgta
gaaacaagggaaggcattaatagaccgcccccagtggatgttagggatgttgttgggaga
cctatagatcccagagaaggccctggaaggcctccgttagatggtagggatcattttgga
agagctcctgtggacatgagagagaatcttgggaggccaggtctagatcatcttggtcga
agagaccactttggctttccccctgagaagccctgggggcttagagattttgatgagaga
gagcatcgagttctgcctgtcttcggtggtccaaaaggcttacatgaagaaagaggtaga
tttcgggctggaagttaccgatttgatcctagaagtggtccttggaacagaggatttggg
caagacgttcccagagattttgatgaccgaagaagaccctgggagaggcagagggatagg
gatgacagagattttgatttctgccgagaaattaatggaaatcgtcttggacgagataga
attcaaaacacttgggtcccccctcctcatgctcgggtttttgattatttcgaaggggcc
acttctcaacgaaaaggtgagaatgtgcctcaagttaacggtgaaaatacagagagacat
gctcagccaccgcctttaccagtacagaaggaccctgaactctatgacaaactggcgtca
tcaggggacatagacaaggaggagagcggcacagttgctggtgtagaaagtgaagcagtg
gtggtagagagcacagagactgaggggacataa
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integrated database retrieval system
