Cricetulus griseus (Chinese hamster): 100774958
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Entry
100774958 CDS
T02813
Symbol
Ift140
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X1
KO
K19672
intraflagellar transport protein 140
Organism
cge
Cricetulus griseus (Chinese hamster)
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cge03037
]
100774958 (Ift140)
Cilium and associated proteins [BR:
cge03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
100774958 (Ift140)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_HPS5
WD40_Prp19
WDR55
Clathrin
Beta-prop_WDR90_POC16_2nd
TPR_IFT80_172
TPR_GEMI5
Beta-prop_CAF1B_HIR1
TPR_COPA_B
RNase_HII
tRNA_int_end_N2
Beta-prop_WDR75_1st
Exo84_C
TPR_2
WD40_MABP1-WDR62_1st
TPR_12
Motif
Other DBs
NCBI-GeneID:
100774958
NCBI-ProteinID:
XP_027280817
UniProt:
G3HBX9
LinkDB
All DBs
Position
7:44621853..44706544
Genome browser
AA seq
1462 aa
AA seq
DB search
MALYFDHRIKAPDVSRSPSHITWHPTHPFLAVASVSPSCGGNVDIYLEQGEPVPDTHIER
SSRVTSLCWHPTRLILAVGWETGEVIMFNKQDKEQHTVPLPHTTDIVILSWSTSGSCLVS
GDKLGVLLLWRLDQRGRVQGTPLLKHEYGKSLTHCIFRLPPPGEDLVQLAKAAVSGDEKA
LDMFNWRKSSFGSFLKTGSQEGLSFFVSLMDGTVHYVDEKGKTAQVASTDSSIQMLFYIE
KREALVVVTQNLLLSLYVVTPEGEAEEVMKVKLSGKTGRRADITLIEGTLLVTAVGEPVL
RFWDLERGENYILSPQEKFGFEKGENINCVCFCKTKGLLAAGTNKGRVALWKKVPNSLSG
RGVEGKDMWALQTPTELEGNITQIKWGSRKNLLAVSSADSVSILSEQAMSSHFHQQVAAV
QISPSLVNVSFLSTGSTHSLRTDMHISGVFATKDAVAVWNGKQVAVFEPSGSTLRNAGTF
LCETSVLAMHEESIYTVEPNRIQVRTWQGTVKQLLLFSESEGSPCFLDVCGTFLVAGTDL
AHFKSFDLSRREAKVHCSSKNLAHMIPDVGSIMSLRCNANGNKISILLNKVDNSPDSKIY
IYDVEMDTVNVFNFKTGQIGQTQTLPFNEPEMNESHIFMHERLASYIPVNHFWDQSEPRL
FVCEALQEASGAQPQGVDKQPHVEDTCHKEDVLILSFFASEEHGFLLHDCFPRPPIYQSL
LGMEVPHYYFTKKPGEAEKEDRVDSGHYHIPQMVAKRPLRDFVGLEDCDKPTREAMLNFS
FFVTIGDMDEAFKSIKLIKSETVWENMARMCVKTQRLDVAKVCLGNMGHARGARALREAE
REPELEARVAMLAIQLGMLEEAEELYKKCKRYDLLNKLYQASDQWQKAVEVAEVHDRVHL
RTTYYNYAKHLEASADCGLALSYYEKSDTHRFEVPRMLSEDLQSLELYINRMKDKTLWRW
WAQYLESQAEMDTALRYYELAQDYFSLVRIHCFQGNIQKAAEIANETGDWAASYHLARQY
ESQDEVKQAVHFYTRAQAFNNAIRLCKENGLDDQLMNLALLSSPEDMIEAARYYEEKGEQ
MDRAVMLYHKAGHFSKALELAFTTQQFAALQLIAEDLDEKSDPALLSRCSDFCIEHRQFE
KAVELLLAAKKYHEALQLCLEQNMTITEEMAEKMTVSKDSKDLSEESRRELLEQIANCCM
RQGNYHLATKKYTQAGNKLKAMRALLKSGDTEKIVFFAGVSRQKEIYIMAANYLQSLDWR
KEPEIMKNIISFYTKGRALDLLAGFYDACAQVEIDEYQNYDKAHGALTEAYKCLSKAKAK
SPLDQETKLAQLQSKMTLVKRFIQARRTYTEDPKESIRQCELLLEEPDLDSTIRIGDVYG
FLVEHHVQMEEYQMAFKYLEEMRKRIPSANISYYVDQRTVDTVHQGLGLPPSRILPERVR
HNSMEDHKDVYEEVMEEVENDP
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atggcactgtattttgaccaccgaatcaaagccccagatgtatccagatctccctcacac
atcacctggcaccccacccacccattcctggcggtagcatctgtaagcccatcttgtgga
ggcaatgttgacatctaccttgaacaaggtgagcctgtgcctgacacccacattgagagg
tcctcccgggtcacttcattgtgctggcacccaacaaggcttatcctggctgttggctgg
gagactggagaagtgataatgtttaataagcaggacaaggagcagcacacagtgcccctg
ccacataccactgacattgtcatcctcagttggagtaccagtgggagctgcctggtatct
ggagataagcttggggtcctgctcttgtggagactggaccagcggggccgagtacagggg
acaccactcctgaaacatgaatacgggaaatcactcacccattgcatcttccgcctccct
cctcctggagaggatctagttcagttggcaaaggcagcagtaagtggtgatgaaaaagcc
ctggacatgtttaactggagaaaaagcagctttggaagtttcctgaagacggggtctcaa
gaggggctgtctttctttgtcagtctgatggatgggacagtgcactatgtggatgaaaaa
ggcaagactgcccaggtggcatccacagatagctccatccagatgctgttctacattgag
aagagagaagcactggttgtggttacacagaacctcctcttgtctctgtatgtggtgact
cctgagggggaagctgaagaagtaatgaaggtaaagttgagtgggaaaacaggtcgccgg
gcagatatcactctgatagagggcacccttcttgtcacagccgttggggaaccagtgctc
agattctgggacttagaacgaggagagaattacatattgagtccacaagagaaatttggc
tttgaaaagggagagaatataaactgcgtttgtttctgtaaaaccaaaggtctcctggca
gctgggaccaataaagggcgagtagccttgtggaaaaaagtgccaaactccctaagtggc
aggggggttgagggcaaggacatgtgggctcttcaaacccctactgaacttgaaggaaac
atcacacaaataaagtggggctccaggaagaaccttctggcagtgagcagtgccgactcc
gtgtccatcctcagtgagcaagccatgtcatcacacttccaccagcaagtagctgctgtg
cagatctccccaagcttagtcaatgtgtctttcctgtccacggggagcacacacagcctt
cgtactgacatgcacatcagtggagtattcgctaccaaggatgctgtggctgtctggaat
ggaaaacaggtggcagtctttgaaccttccggatctaccttaaggaatgcagggacgttt
ctttgtgaaacatcagtgttagcaatgcatgaagaaagcatttatacagtggagccaaac
cgaattcaagtacggacctggcagggaactgtcaaacaacttctgctgttttctgagtcc
gaggggagcccctgcttcctagacgtctgtgggactttcctggttgcagggacagattta
gctcactttaaaagttttgatctttccagaagggaagcaaaagtgcactgcagctctaag
aacctggcccacatgatccctgatgtggggagcatcatgtctctgaggtgcaatgccaat
gggaacaagatcagcattctccttaacaaggttgacaatagccctgattccaaaatctac
atctatgatgttgaaatggacacagtgaatgtcttcaacttcaagactggacagattgga
cagacgcagacactgccctttaatgagcccgagatgaatgagagccacatctttatgcat
gagagactagcgagttacatccctgtgaaccatttctgggatcagagtgagcccaggctc
ttcgtgtgtgaggccttgcaggaggcatctggagcccaaccacagggcgtagacaagcag
ccccatgtggaggacacatgccacaaggaagatgttttgattctgtcattctttgcttct
gaagagcatggcttcttgctccacgactgcttcccccggcctcctatctaccagagcctt
ctgggaatggaagtgcctcattattacttcacaaaaaagcctggagaagcagagaaagaa
gacagggtggattctgggcactaccacatccctcagatggtagccaagagacccctacga
gactttgtggggctggaggactgtgacaagcctactcgggaagccatgctcaacttcagc
ttctttgtcaccattggggacatggatgaagctttcaaatctatcaaactcatcaaaagt
gagactgtttgggagaacatggcacgcatgtgtgtgaagactcagaggctggatgtcgcc
aaggtgtgcctagggaacatgggccatgcccgtggagcccgagcactgcgggaagctgag
cgagagccagaactggaagccagagtagccatgctggccatacagctgggcatgctggag
gaggctgaagagctgtataagaagtgcaagcgctacgacctcttgaataagctctaccag
gcctcagatcagtggcagaaagccgtggaggtggctgaggtccacgaccgtgtccacctg
cgcaccacctactacaactatgccaagcacctggaggccagtgctgactgtggcctggcc
ctcagttactacgagaagtcagacacccaccgctttgaggtacctaggatgctctcagaa
gacctgcaatcactggagctctacatcaacaggatgaaggataagaccctgtggagatgg
tgggcccagtaccttgagagccaggccgagatggacactgcattgcgctattacgagctg
gcacaggactacttctccctggtccggattcactgctttcagggcaacattcagaaggct
gctgaaatagccaacgagactggagactgggctgcatcctaccaccttgcccggcagtat
gagagccaggatgaggtaaaacaggcagtgcacttctacacaagggcacaggctttcaac
aatgccatccgcctatgcaaggagaatggcttagatgaccagctcatgaacttggccctt
ttgagctctccagaggacatgattgaagcagcccgatattatgaggagaagggcgagcaa
atggacagggctgtcatgctgtatcataaggctggacatttttccaaggccctggagttg
gccttcaccacccagcagtttgcagccctacagctcatagcagaggacctggatgagaag
tcagatcctgctctcctgtcccgctgctcagacttctgcattgagcacaggcagtttgaa
aaggctgtcgaacttctgctggctgccaagaagtatcatgaggctctgcagctgtgccta
gaacagaacatgaccatcactgaggagatggcagagaagatgaccgtgtccaaggactca
aaggacctgtctgaggagtcacggcgtgagctgctagagcaaattgccaactgctgtatg
cgccagggcaactatcacctggccaccaagaagtacacacaggctgggaacaagctgaaa
gccatgagagcactgctaaaatctggagacacagagaaaattgtgttctttgcgggcgtc
tcaagacagaaggaaatctatatcatggcagccaattacctacagtccttggactggcgg
aaggagccggagatcatgaagaatattatcagcttctacaccaaagggcgggccttggac
ctcctggctggcttctatgatgcctgtgcccaggtggagattgatgaataccagaactat
gacaaggctcacggggcattgactgaggcctataagtgcctatccaaagccaaggccaag
agccccctggaccaggagaccaagctagcccagctacaaagcaagatgaccctagtgaag
aggttcatccaggcccgaaggacatacacagaggaccccaaagagtccatcagacagtgt
gaactgctcctagaagagccagacctggacagcaccatccgcatcggggacgtctatggc
ttcctggtggaacaccatgtacagatggaggaataccaaatggcctttaagtatcttgag
gagatgaggaaaagaattccttcagccaacatatcatactatgtggaccagcgcactgtg
gacactgtgcatcagggcctgggcctcccgccatcccgcatcttgcccgagcgggtccgg
cacaatagcatggaggaccacaaggatgtgtatgaagaggtgatggaagaggtggaaaat
gatccctga
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