Cricetulus griseus (Chinese hamster): 103161970
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Entry
103161970 CDS
T02813
Symbol
Vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase isoform X2
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge04137
Mitophagy - animal
cge04141
Protein processing in endoplasmic reticulum
cge05014
Amyotrophic lateral sclerosis
cge05022
Pathways of neurodegeneration - multiple diseases
cge05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103161970 (Vcp)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
103161970 (Vcp)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
103161970 (Vcp)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103161970 (Vcp)
05022 Pathways of neurodegeneration - multiple diseases
103161970 (Vcp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cge03019
]
103161970 (Vcp)
03009 Ribosome biogenesis [BR:
cge03009
]
103161970 (Vcp)
04131 Membrane trafficking [BR:
cge04131
]
103161970 (Vcp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cge04147
]
103161970 (Vcp)
Messenger RNA biogenesis [BR:
cge03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
103161970 (Vcp)
Ribosome biogenesis [BR:
cge03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
103161970 (Vcp)
Membrane trafficking [BR:
cge04131
]
SNARE
SNARE associated proteins
Others
103161970 (Vcp)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
103161970 (Vcp)
Exosome [BR:
cge04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103161970 (Vcp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
RNA_helicase
AAA_28
Vps4_C
nSTAND3
AAA_18
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_7
ATPase
DUF815
Bac_DnaA
ABC_tran
AAA_24
NB-ARC
ResIII
TsaE
Zeta_toxin
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
bpMoxR
KAP_NTPase
Zot
UFD1
DUF3944
Motif
Other DBs
NCBI-GeneID:
103161970
NCBI-ProteinID:
XP_027259082
UniProt:
A0A8C2N386
LinkDB
All DBs
Position
2:100538092..100556254
Genome browser
AA seq
806 aa
AA seq
DB search
MASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGSGGGTGGSVYTEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctctggagccgattcaaaaggtgatgatttatcaacagccattctcaaacaaaag
aaccgtcccaatcggttaattgttgatgaagccatcaatgaagataacagtgtggtgtcc
ttgtcccagcccaagatggatgagctgcagttgttccgaggtgacacagtattgctaaaa
ggaaagaagagacgggaagctgtgtgtattgtactttctgatgacacatgttctgatgag
aagattcgaatgaatagagttgttcggaataacctccgtgttcgcctaggggatgtcatc
agcatccagccatgccctgatgtaaagtatggcaaacgtatccacgtgctacccatcgat
gacacggtggaaggcatcactggcaatctctttgaggtataccttaagccctacttcctg
gaagcttatcgacctatccgtaaaggagatattttccttgtccggggtgggatgcgtgct
gtggagttcaaagtagtagagacagatcccagcccttactgtattgttgctccagacaca
gtgatccactgtgaaggggagccaatcaagcgagaggatgaggaagagtctctgaatgaa
gtaggctatgatgacattggtggctgcaggaagcagctagctcagataaaggagatggtg
gaactgccactgagacatcctgcactctttaaggcaattggtgtgaagcctcctcgagga
atcttgctatatggacctcctgggacagggaaaaccctgattgcccgagctgtggcaaat
gaaactggagccttcttcttcttgatcaatggacctgagatcatgagcaaattggctggt
gaatctgagagcaaccttcgtaaagcctttgaggaagctgaaaagaatgctcctgctata
atcttcattgatgagcttgatgccattgcgcccaaaagagagaaaactcacggggaagta
gagcgtcgtatcgtgtctcagttgttgacccttatggatggcctgaagcagagagcacat
gtgatagttatggcagcaaccaatagacccaatagcattgacccggccctacggcgattt
ggtcgctttgacagagaggtagatattggaatccctgatgctacaggacgcttggaaatt
cttcagatccataccaagaacatgaaactggcagatgatgtggacttggaacaggtagcc
aatgagactcatggccatgtaggtgctgatttggcagccctgtgttcagaggctgctctg
caggccatccggaaaaaaatggaccttattgatcttgaggatgagaccattgatgcagag
gtcatgaattccttggcagttactatggatgatttccggtgggccttgagtcaaagcaac
ccatcagcacttcgggaaactgtggtagaggtgccacaagtaacctgggaagacattgga
ggcttggaagatgtcaaacgggagcttcaggaactggttcagtatcctgtggagcatcca
gacaaattcctcaaatttggaatgaccccttccaaaggtgttctcttctatggacctcct
ggttgtgggaagaccttgctggccaaagccattgctaatgaatgccaggctaacttcatc
tctatcaagggtcctgagctgctcaccatgtggtttggggaatctgaggccaatgtcagg
gaaatttttgacaaggcacggcaagctgccccctgtgtactattctttgatgagttagat
tcaattgccaaggctcgtggtggtaatattggagatggtggtggagctgctgaccgagtc
atcaatcagatcctgacagaaatggatggcatgtccacaaaaaagaatgtgtttatcatt
ggagctaccaaccggcctgacatcattgatcctgctatcctaagacctggccgtcttgat
cagctcatctatatcccacttcctgatgagaagtcccgtgttgccatcctgaaggctaac
ctgcgcaagtctccagttgccaaggatgtggatttggagttcctggctaagatgacaaat
ggcttttctggagctgatctgacagagatttgccaacgtgcttgtaaactggccattcgt
gaatctattgagagtgagattaggcgagaacgagagaggcagacaaatccatcagctatg
gaagtagaagaggatgatccagtgcctgagattcgcagagaccactttgaagaagccatg
cgctttgctcgtcgttctgtcagtgataatgacattcgaaagtatgaaatgttcgcccag
acacttcagcaaagtcgaggttttggcagcttcagattcccttcagggaaccagggtgga
gctggccccagccagggcagtggcggtggcacaggtggcagtgtgtacacagaagacaat
gacgatgacctgtatggctaa
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