Cricetulus griseus (Chinese hamster): 103162562
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Entry
103162562 CDS
T02813
Name
(RefSeq) protocadherin alpha-6-like isoform X2
KO
K16493
protocadherin alpha
Organism
cge
Cricetulus griseus (Chinese hamster)
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cge03036
]
103162562
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cge04515
]
103162562
Chromosome and associated proteins [BR:
cge03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
103162562
Cell adhesion molecules [BR:
cge04515
]
Cadherins
Protocadherins
103162562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
103162562
NCBI-ProteinID:
XP_035295629
UniProt:
A0A9J7GTT1
LinkDB
All DBs
Position
2:complement(200560469..200566534)
Genome browser
AA seq
870 aa
AA seq
DB search
MEIKQEAFGMDFTTEGRLGTRCLLLWLLLLAAWEAGSGQLHYSVPEEAKHGTFVGRIAQD
LGLELAELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREALCGRSAECSIHLEVIVD
RPLQVFHVEVEVRDINDNPPMFSVKEQRMLIYESRLPDSLFPLEGASDADVGSNSVLTYK
LSPSEYFGLDVKTNSDGNKQIGLSLKKSLDREDAPEHKLLLTATDGGKPELTGSVQLLVT
VLDVNDNAPTFQQSEYEVRILENSDNGTTVIRLNASDRDEGTNSAISYSFNRLVSSMVLE
QFSIDTDTGEIIIQGNLDFEQVNVYKIRVDATDKGHPPMAGHCTVLVKVLDENDNVPQVT
LTSLSLPVREDAALGTVIALISVSDLDSGANGQVTCSLTPHVPFKLVSTFKNYYSLVLDS
ALDRETTADYKVVVTARDGGSPSLWATASVSVEVADVNDNAPAFAQPEYTVFVKENNPPG
AHIFTVSATDADVQENALVSYSLVERRVGERLLSSFVSVHAESGKVFALQPLDHEELELL
QFQVSARDAGVPALGSNVTLQVFVLDENDNAPALLGPWTQGSGGVVSELVSPSMGAGQVV
TKVRAVDADSGYNAWLSYELHPLSGGTRSLFRVGLYTGEISTTRTLDETDAPRHRLLVLV
KDHGEPALTATATVLVSLVENSQTPKASSRASSSTGQEVSLVNVNVYLIIAICAVSSLLV
LTLMIYSALRCSVPPTEGVCGSGKPVLVCSSAVGSWSYSQQRRQKVCSGEGPPKTDLMAF
SPSLPPCPVVGEHQDLNDDHCSRVSPKFIIVIYHGLNFLNFVNSTYYLGHMMSLLTTKWS
RREAIHFPLERIHWASLFGCSTMASKSGLD
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggaaataaagcaagaagcatttggcatggattttaccactgaaggcagactgggaaca
cggtgtctgctgctctggcttcttctcctcgcagcctgggaggcagggagcggccagctc
cactactccgtccccgaggaggccaaacacggcaccttcgtgggccgcatcgctcaggac
ctggggctggagctggccgagctggtgccccgcctgtttagggtggcgtccaaggaccgc
ggggaccttctggaggtaaatctgcagaatggcattttgtttgtgaattctcggatcgac
cgggaggcgctgtgcgggcggagcgcggagtgtagcatccacctggaggtgatcgtggac
cggcctctgcaggttttccacgtggaggtggaggtgagggacattaacgacaatcctccc
atgttctccgtaaaggagcaaagaatgttaatttatgaatctaggttgccagattctttg
tttccactagagggcgcatcagatgctgatgttggatcaaattctgtcttaacctataaa
ctcagtcccagcgaatactttgggctagatgtgaaaacaaacagtgatggcaacaaacaa
attggactatcgttgaaaaaatccttggacagagaggatgctcctgagcataagctactg
ctgacagccacggatggaggcaaacctgagctcacaggctctgttcagctgctggtcact
gtgctggatgtgaacgacaacgcccctactttccagcagtctgagtatgaagtgagaata
ttggaaaactcagacaacggaacgacggttatcagactgaatgcttctgacagggacgaa
gggacgaattcagcaatttcttactcctttaacaggctggtctcatccatggttctcgag
cagtttagcatagacacagatacaggagaaatcataattcaagggaacttggactttgag
caagtcaatgtctacaaaatccgcgttgacgcgacggacaaaggacaccctccgatggcg
ggtcattgcactgttctagtgaaggtattggatgaaaacgacaatgtgcctcaggtcaca
ttgacttccttatccctgcctgttcgagaggatgctgcactgggtactgtcattgctcta
atcagcgtttcagacttggactctggagccaatgggcaggtgacctgctctctgacccct
catgtccctttcaagctggtgtccaccttcaagaattactattcgcttgtgctggacagt
gccctagaccgagagaccacagctgactataaggtggtggtgaccgcccgcgacgggggc
tcgccctcgctgtgggccacagccagcgtgtccgtggaggtggctgatgtgaacgataac
gctcccgcattcgcgcagcccgaatacacggtgttcgtgaaggagaacaaccctcctggc
gcgcacatcttcacagtgtcggccacagacgccgacgtgcaggagaacgcgctggtgtcc
tactctctggtggagcggcgggtgggcgagcgcttgctgtcgagcttcgtgtctgtgcac
gcagagagcggcaaggtgttcgcgctgcagcctctggaccatgaggagctggagctgctg
cagttccaggtgagcgcgcgggatgctggtgtgcctgccctgggcagcaatgtgactctt
caggtgtttgtgctggatgagaacgacaatgcacccgcgctgctaggaccttggacacaa
ggatctggtggtgtagtgagcgagctcgtgtctccctcaatgggtgccggccaagttgtc
actaaggtgcgtgctgtagatgcggattctggctacaatgcatggttgtcttatgaattg
catcctttatcaggtggaactcggagcttgttccgggttggtctgtacacgggcgagatc
agtactacacgcaccctggatgagacggatgcaccgcgccatcgcctattagtgctagtg
aaggaccatggggagccagctctgacggccactgccaccgtgttagtgtctctggttgag
aatagccaaactccaaaagcctcttcgcgggcttcaagctccaccggccaggaagtttcg
ttagtgaatgtcaatgtctacctgatcattgccatctgcgcagtgtccagcctgttagtt
ctaactctcatgatatactctgcacttcggtgctcagtgccccccacagagggcgtgtgc
gggtctgggaaacccgtgctggtgtgctccagcgcggtggggagctggtcatactcgcag
cagaggagacagaaggtgtgttctggagagggaccacccaaaaccgacctcatggccttc
agcccgagtcttcctccttgtccggtagtgggggagcatcaggatttgaacgatgatcat
tgttcaagagtaagtccaaaatttataattgtcatatatcacggtttaaattttttaaat
tttgtaaattctacttactacttgggccacatgatgtcgctgttaaccactaaatggtca
cgacgtgaagccattcattttccattagaaaggatccactgggcttcactcttcggttgc
tcgacaatggccagcaaatcgggattggattga
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