Cricetulus griseus (Chinese hamster): 107976990
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Entry
107976990 CDS
T02813
Symbol
Prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8 isoform X2
KO
K12856
pre-mRNA-processing factor 8
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107976990 (Prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cge03041
]
107976990 (Prpf8)
Spliceosome [BR:
cge03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
107976990 (Prpf8)
Complex C
U5 SnRNP specific factors
107976990 (Prpf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
107976990
NCBI-ProteinID:
XP_027282540
UniProt:
A0A9J7GDA7
LinkDB
All DBs
Position
7:88936612..88962887
Genome browser
AA seq
2335 aa
AA seq
DB search
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
SQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtgtttccttaccgagggccgggtaacccggttcccggccccctagccccg
ctgccggactacatgtcagaggagaagctgcaggaaaaagctcgaaaatggcagcagtta
caagccaagcgctatgcagagaagcggaaatttgggtttgtggatgctcagaaggaagac
atgcccccagaacatgtcaggaagatcattcgagaccatggagacatgaccaacaggaag
ttccgccatgacaaaagggtctatttgggagccctcaagtacatgcctcatgcagttctc
aagctcctggagaacatgcccatgccttgggagcagattcgggatgtgcctgttctgtac
cacatcactggagccatttcctttgtcaatgagattccctgggtcattgagccagtttac
atctcccagtgggggtcaatgtggatcatgatgcgtcgagaaaaaagagacaggaggcat
ttcaagaggatgcgtttccctccgttcgatgatgaggaacctcccctagattatgctgac
aacatcttagatgttgagcctctggaagccattcagctagagctggaccctgaggaggat
gcccctgtgttggattggttctatgaccaccagccattgagagacagtaggaagtatgtt
aatggttccacttaccaacgctggcagttcacattgcctatgatgtccactctctatcga
ttggccaatcagcttctgactgacttggtggatgacaactacttctatctgtttgacctg
aaggccttctttacctctaaggcactcaatatggccattcctggaggacccaaatttgaa
cctcttgttcgagatatcaacctacaggatgaagactggaatgaattcaatgatattaat
aagatcatcatccgtcagcctattcgtactgaatacaagattgcttttccttacctgtat
aacaaccttccacaccatgtccacctgacctggtaccacactcctaatgttgtattcatc
aagactgaggatcctgatttgccagctttctactttgatcctctgatcaacccaatctct
catagacactcagtcaagagccaggaaccattgcctgatgatgatgaggaatttgaactc
cctgagtttgtggagccctttctgaaggacacacccctctatacagacaatacagccaat
ggcattgccctgctctgggcaccacggccctttaacctacgctctggtcgtacccgccgg
gccctggacatacctcttgtcaagaactggtatcgggagcattgtcctgctgggcagcct
gtgaaggtgcgagtctcctatcagaagctgcttaagtactatgtgctgaatgccctcaag
catcggcctcctaaagcccaaaagaagaggtatctgttccgctcattcaaagctaccaaa
ttctttcagtccacaaagctagactgggtggaggtggggctgcaggtctgccgccagggc
tacaacatgctcaaccttctcattcaccggaagaacctcaactacctgcacttggactat
aacttcaacctgaagcctgtcaagacgctcactaccaaggaaagaaaaaaatctcgtttt
gggaatgcgttccatctgtgtcgggaagtactgcggttaactaagctggttgtggatagt
catgtgcagtaccgcttgggcaatgtggatgccttccagctggcagatggattgcagtat
atatttgcccacgtggggcagttaaccggcatgtatcgatacaaatataaactgatgagg
cagatccgcatgtgcaaggacttgaagcatctcatctattaccgattcaatacgggccct
gtagggaaaggccctggctgtggtttctgggctgctggctggcgagtctggctgttcttc
atgcgtggaattacacctttgctagagcgatggctgggcaacctcctggcccgacagttt
gaaggccgtcactcaaagggggtagcaaagacagtaacaaagcaaagagtggagtcccat
tttgaccttgagcttagggcagctgtgatgcacgatattctggacatgatgcctgaaggc
atcaaacagaataaggcccgaacaattctgcagcacctcagtgaagcctggcgctgctgg
aaggccaacattccctggaaggtcccaggcctgccaacacctatagagaatatgattctt
cggtatgttaaggccaaggctgattggtggaccaatactgctcactacaaccgtgaacga
atccgccgtggggccactgtagacaagactgtttgcaaaaagaacctgggccgcctcacc
cgcctgtacctgaaggcagaacaggaacggcagcacaattacctgaaggatgggccttac
attacagcagaagaagcagtggctgtgtatactaccactgtgcattggttggaaagccgt
agattctctcccatcccattccctccactctcctacaagcatgacaccaagttgctcatc
ctagctctggaacgcctcaaggaagcttatagtgtgaagtctaggttaaaccagtctcag
agggaagagctgggtctgatcgagcaagcctatgacaacccccatgaggctttgtcccgc
atcaagcgtcacctcctcacgcagagagcctttaaggaagtaggcattgagtttatggat
ctctatagccacctggtgccagtgtatgacgtggagcccctggagaaaataactgatgcc
tacctggaccaatacctgtggtatgaagcagataagcgccgtcttttcccaccctggatc
aagcctgccgacacggagccgcctccactgctcgtttacaagtggtgccaaggcatcaat
aacctgcaggatgtgtgggagaccagtgagggcgagtgcaatgtcatgttggagtcccgc
tttgagaagatgtatgaaaagattgacttgaccctgcttaataggctgctgcgactcatt
gtggaccacaacatagctgactacatgacagccaagaacaatgttgtcattaactataag
gacatgaaccatacaaactcatatgggatcatcagaggcctgcagtttgcctctttcatt
gtacagtactatggcttggtgatggatttgcttgtattgggattgcaccgggccagtgag
atggctgggcctcctcagatgccaaacgactttctcagtttccaggacatagccactgag
gctgctcacccaatccgactcttctgtagatacattgatcgcattcatattttcttcagg
ttcacagcagatgaagctcgggatctgatccagcgttacctgacggagcatccagacccc
aataatgaaaacattgttggctacaataacaagaaatgctggccccgagatgcccgaatg
cgcctcatgaagcatgatgtcaacttgggtcgggcagtgttctgggacatcaaaaaccgg
ctgccacgatcagtgactacagtacaatgggagaatagctttgtgtctgtgtacagtaaa
gacaaccccaacctgctgttcaacatgtgtggctttgagtgccgcatcctgcctaagtgc
cgtaccagctatgaagaattcacccacaaggatggggtctggaaccttcagaatgaggtt
accaaggagcggacagcgcaatgtttcctgcgtgtggacgatgagtcgatgcaacgcttc
cataaccgagttcgtcagattctaatggcctctggctccaccacctttaccaagattgtg
aataagtggaatacagctctcatcggccttatgacatattttcgagaggctgtagtgaat
actcaggaactcctagacttattggtaaagtgtgaaaacaagatccagacacgaatcaag
attggattgaactccaagatgccaagtcggttcccccctgttgtgttctacactcctaag
gagctgggtgggcttggcatgctctcaatgggtcatgtgctcatcccccagtctgacctc
aggtggtccaagcaaaccgatgtgggtatcacacacttccgttcaggaatgagtcatgaa
gaagaccaactgattcccaatttataccgctacatacagccgtgggagagtgagttcatt
gactctcaacgggtctgggctgagtatgcactcaagagacaggaggctattgctcagaac
agacggctgactttagaggatttagaagattcatgggatagaggcattccacggatcaat
accctgttccagaaggaccggcacacattagcttatgataaaggctggcgtgtccgaact
gacttcaagcagtatcaggttttgaagcaaaaccccttctggtggacacatcagcggcat
gatggcaagctctggaacctcaacaactaccgcacagatatgattcaggccctaggtggc
gtggagggcattctggagcacactctcttcaagggcacttacttccctacctgggaaggt
ctgttctgggagaaagccagtggctttgaggaatccatgaagtggaagaagctaaccaat
gctcagcgatcaggattaaaccagattcctaatcgtagattcaccctctggtggtccccc
acaatcaatcgagccaatgtatatgtaggcttccaggtacagctggacttgacaggaatc
ttcatgcatggcaagatacccacactgaagatctctcttatccagatattccgagctcac
ctgtggcagaagatccatgagagcatcgtgatggacttatgtcaggtctttgaccaggaa
ttggatgcactggaaattgagacagtacaaaaggagacaatccatccccgaaaatcctat
aagatgaattcttcctgtgctgacatactactctttgcttcctataagtggaatgtctcc
cggccctcactgctggcagactccaaggatgtgatggacagcacaactacacagaagtat
tggattgacatccagttacgatggggagactatgattcccatgatatcgagcgctatgcc
cgggccaagttcctggattataccacagacaacatgagtatctacccttctcccacaggt
gtgctcattgccattgacctggcctataatctacacagtgcctatggaaactggtttcca
ggcagcaagcctcttatacagcaggctatggccaagatcatgaaggcaaatcctgccttg
tatgtattacgtgaacggatccgcaaaggactgcagttgtattcatctgagcccactgag
ccttatctgtcctctcagaactatggtgaactcttctctaaccagattatctggtttgtg
gatgacaccaatgtctatagagtgaccatccacaagacctttgaggggaacttgacaacc
aaacccatcaacggagccatcttcatctttaacccacgtacggggcagcttttcctcaag
ataatccatacatctgtgtgggctggacagaagcgtttgggtcagttggccaagtggaag
acagctgaggaagtggctgccctgattcgatctctgcctgtagaggaacagcctaaacag
atcattgtcaccaggaagggcatgctggatccattggaggtgcacttgctggacttcccc
aacattgtgatcaaagggtcagagctccagctccccttccaggcttgtctcaaggtggag
aagtttggggatctcatccttaaagccacagagccccagatggttctcttcaacctctac
gatgactggctcaagactatctcatcctacacggctttctcccgtctcatcctgattctg
cgtgctttgcatgtgaacaatgatagggcaaaggtgatcctgaagccagacaaaactact
attacagaacctcaccacatctggcccacgctgactgacgaggagtggatcaaggtggag
gtgcagctcaaagatctgatcttagccgactatggcaagaaaaacaatgtgaatgtggca
tcactgacacaatcagaaattcgagacatcatcctaggaatggagatctcagcaccatca
cagcagcggcagcagatagctgagattgagaagcagaccaaggagcagtcacagctcact
gccacacaaacccgaactgtcaacaagcatggtgatgagattatcacctccaccactagc
aactatgagacccagaccttctcatcaaagactgaatggagagtcagggccatttcagct
gccaacctgcatcttcggaccaatcacatttatgtttcatctgatgacatcaaggagact
ggttatacttacatccttcccaagaatgtacttaagaaattcatctgcatatctgatctc
cgtgcccaaattgcagggtacctatatggggtgagtcctccagataaccctcaggtgaag
gagatccgctgtattgtgatggtgcctcagtggggcactcaccagactgtgcaccttccc
agccagctgccccagcatgagtacctcaaggagatggaacccttaggttggatccacact
caacccaatgagtctccccagctatcaccccaagatgtcaccactcatgccaagatcatg
gctgacaacccatcttgggatggcgagaagacaattatcatcacctgcagcttcacccca
ggctcctgcacactgacagcctacaagttgacccccagtggctatgagtggggccgacag
aacactgacaaaggcaacaaccccaaaggctacctgccctcacactatgagagggtccag
atgctcctctcagaccgattcctcggcttctttatggttcctgcccagtcctcctggaat
tacaactttatgggtgttcggcatgatccaaacatgaaatatgagctgcagctggcaaac
cccaaggaattctatcatgaggtccataggccctcccacttcctcaactttgccctcctg
caggagggtgaggtctactctgcagacagagaggacctctacgcctag
DBGET
integrated database retrieval system
