Cricetulus griseus (Chinese hamster): 107976999
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Entry
107976999 CDS
T02813
Symbol
Col4a2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X2
KO
K06237
collagen type IV alpha
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge04151
PI3K-Akt signaling pathway
cge04382
Cornified envelope formation
cge04510
Focal adhesion
cge04512
ECM-receptor interaction
cge04820
Cytoskeleton in muscle cells
cge04926
Relaxin signaling pathway
cge04933
AGE-RAGE signaling pathway in diabetic complications
cge04974
Protein digestion and absorption
cge05146
Amoebiasis
cge05165
Human papillomavirus infection
cge05200
Pathways in cancer
cge05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
107976999 (Col4a2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107976999 (Col4a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107976999 (Col4a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107976999 (Col4a2)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
107976999 (Col4a2)
09154 Digestive system
04974 Protein digestion and absorption
107976999 (Col4a2)
09158 Development and regeneration
04382 Cornified envelope formation
107976999 (Col4a2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
107976999 (Col4a2)
09162 Cancer: specific types
05222 Small cell lung cancer
107976999 (Col4a2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
107976999 (Col4a2)
09174 Infectious disease: parasitic
05146 Amoebiasis
107976999 (Col4a2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
107976999 (Col4a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cge04147
]
107976999 (Col4a2)
00536 Glycosaminoglycan binding proteins [BR:
cge00536
]
107976999 (Col4a2)
Exosome [BR:
cge04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
107976999 (Col4a2)
Glycosaminoglycan binding proteins [BR:
cge00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107976999 (Col4a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
107976999
NCBI-ProteinID:
XP_027243678
UniProt:
A0A9J7HDF7
LinkDB
All DBs
Position
1
Genome browser
AA seq
1707 aa
AA seq
DB search
MDRVKFSVSGPALRGWLLLATVTVGLLAQSVLAGVKKLDVPCGGRDCSGGCQCYPEKGAR
GQPGPVGTQGYNGPPGLQGFPGLQGRKGDKGERGAPGPTGPKGDVGARGVSGFPGADGIP
GHPGQGGPRGRPGYDGCNGTRGDAGPQGPSGSGGFYGSPGPQGPKGQKGEPYVLRKEDQD
KYRGEPGEPGQIGYQGPPGRLGLIGQMGPMGAPGRPGPPGPPGPKGQPGNRGLGFYGKKG
EKGDVGQPGPNGIPSDITLIGPTTTTYRPDQYKGEKGSRGDQGIPGPSLKGEEGIMGFPG
TRGHPGIDGEKGIFGQKGSRGLDGFQGPSGPRGPKGERGQQGPPGPPVYSPHPSLAKGAR
GDPGFPGAHGEPGSRGEPGDPGPMGPPGPSIGDEDTKRGLPGEMGPKGFSGEPGHPAPYP
GPPGADGKPGLQGVPGPAGPPGPDGFLFGLKGSEGRVGYPGPSGFPGARGQKGWKGEAGD
CQCGQVIGGLPGLPGPKGSPGVNGELGKKGDQGDPGLHGIPGFPGFKGAPGPTGIPGPKG
IKGDSRTVTTKGERGQPGVPGVHGMKGDDGVPGRDGLDGFPGLPGPPGDGIKGPPGDAGS
PGLPGTKGFPGEVGPPGQGLPGPKGERGFPGDAGFPGSPGYPGPPGPPGAPGQLDCDTGV
KRPIGGGQQVIIQPGCGEGPTGSPGNPGPPGPTGVKGIRGMPGFPGDTGAPGLKGFPGDP
GREGFPGPPGFMGPRGSKGATGLPGPDGLPGPTGLPGPAGPPGDRGIPGEVLGAQPGPRG
DAGLPGHPGLKGPPGERGPPGVTGSQGMPGIPGLKGQPGFPGPSGQPGLPGPPGQDGFPG
APGREGPLGLPGSLGLRGLPGDRGEPGEPGVPGPVGMKGLSGDRGDVGISGERGHPGSPG
IKGVAGMPGNPGQKGDRGSPGMDGFQGMLGLKGRPGFPGVKGEAGFFGVPGLKGMPGEPG
VKGNRGDRGPPGPPPVILPGMKDIKGEKGDEGPMGLKGYLGLKGIQGMPGVPGLAGIPGL
PGRPGYIKGVKGDIGVPGTPGLPGQPGVVGTPGITGFPGFIGSRGEKGAPGRAGLFGEIG
LTGDFGDIGDTVDLPGSPGLKGERGVTGIPGLKGILGEKGTEGEVGFPGITGMAGPQGSP
GLKGQTGFPGLTGLQGPQGDPGRSGVPGDKGDYGWPGVSGLPGFPGIRGISGLHGLPGTK
GFPGSPGADVHGDPGFPGPAGDRGDRGEANTLPGPVGAAGQKGERGTPGERGPAGSPGLQ
GFPGISPLSNISGSPGDVGAPGIFGSEGYRGPPGPPGPNALPGIKGDEGSVGAAGFPGQK
GWVGDPGLQGQPGVVGLPGEKGPKGEQGFMGNTGPSGAVGDRGPKGPKGDQGFPGAPGSV
GSPGIPGIPQKIAIQPGTMGPQGRRGLPGAQGEMGPQGPPGDPGFRGAPGKAGPQGRGGV
SAVPGFRGDQGPMGQQGPIGQEGEPGRPGSPGLPGMPGRSVSIGYLLVKHSQTDQEPMCP
VGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASRNDKSY
WLSTTAPLPMMPVAEEEIKPYISRCSVCEAPAVAIAVHSQDVSIPHCPAGWRSLWIGYSF
LMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYFANKYSFWLTTIPEQSFQ
GTPSADTLKAGLIRTHISRCQVCMKNL
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atggaccgagtgaagttctcagtgtctggccctgccctgagagggtggctgctactggcg
actgtgacagtgggactcctggctcagagcgtcttggctggggtgaagaagttggatgtg
ccctgcggagggagagactgcagtggtggctgccagtgctaccccgaaaaaggagcacgg
ggtcagccggggccagtgggcacccaggggtacaatggccccccagggttgcaaggcttc
ccaggactacagggccgcaaaggagacaagggtgaacggggagctcctgggccgactgga
ccaaaaggagatgtgggagccagaggcgtctctggattccccggcgcagatggaattcct
ggacatccagggcaaggtgggccccgaggaagaccaggctatgatggttgcaatgggacc
agaggagacgcaggtccacaagggccctctggatctgggggcttctatggctcccctggg
ccccaaggacccaaggggcagaaaggtgaaccttacgtactgcgtaaagaagaccaagac
aaatacaggggtgaacctggagagcctggacagatcggctaccaggggcctcctggccgc
ctggggctgataggacagatgggtcccatgggagcacccggaagaccgggaccaccaggg
ccccctggacccaaaggacaaccaggcaaccgaggacttggtttttacggaaagaagggt
gaaaagggtgacgtaggacagccaggacccaatgggatcccatccgacatcacactcatt
gggcccacaacaacaacgtaccgtccagatcagtacaagggtgaaaagggaagcagagga
gaccaagggataccaggcccctccttgaaaggcgaggaaggcatcatgggattcccagga
acacggggtcatcccggcattgatggagaaaaaggaatcttcggacagaaaggaagcaga
ggcctggatggtttccaaggccccagtggacctcgaggacccaagggagaacgtggacag
caaggccctccaggaccccctgtctactcgccccatccatccctggcaaaaggtgccaga
ggtgacccaggattcccaggtgctcatggggaaccaggaagccgaggcgagccaggagac
cctggccccatgggacccccaggcccatctattggagatgaagatacaaaaagaggcctt
ccaggggagatgggacccaaaggcttctcaggagaaccgggccacccagcaccctatcca
ggtccaccaggagctgatggaaaaccaggtctccaaggagtacctggacctgcaggccca
cctggaccagatggcttcctgtttggcctgaaaggatcagaagggagagtgggttacccg
gggccttccggtttcccaggggctcgaggacagaaaggatggaaaggtgaagccggagac
tgccagtgtggccaggtcatcgggggtcttccgggattgccaggacccaagggttctcct
ggtgtcaatggggaactgggaaagaaaggggaccaaggagacccaggcctgcacggtatc
cctgggttcccaggattcaagggagccccaggccccactggaattcctggacccaaggga
ataaagggagactccagaacagtcacaaccaaaggtgagcgaggacagccaggtgtccca
ggtgtccatgggatgaaaggtgatgatggtgtcccaggtcgtgatgggctggatggattc
cctggccttcctggtcctccgggtgatggtatcaaaggccctccgggagatgcaggttcc
cctggcttgcccggaaccaagggctttccaggagaagtgggtcctccaggacagggctta
ccaggcccgaaaggcgagcgtggtttccctggagatgctggatttccaggttctccaggc
taccctggtcctccaggtcctccaggagccccaggacaattggattgtgacacaggtgtg
aaaaggcctattggaggtggccagcaagtgatcattcagccaggttgcggtgaaggtccc
acaggatcacctggaaatccaggacccccaggccccacaggtgtcaaaggcatcagagga
atgccaggattcccaggagatactggagcaccagggctcaagggctttcctggagaccca
ggtcgtgaaggtttcccaggacccccagggttcatgggaccccgaggatccaaaggtgct
acaggcctccctggcccagatggactcccaggccccactggacttccaggaccagctgga
ccccctggagacagagggattccaggagaagtcctaggagcccaacctgggccccgggga
gatgcaggactaccaggacaccctgggctaaaaggacctccaggagaaagaggaccccct
ggagtcacaggaagccaagggatgcccggaattccagggcttaaaggtcagccaggcttc
ccagggccttcaggacagccaggactacctggacccccaggacaagatggattcccagga
gctcctggccgagaggggcccttggggctgccaggatccctgggccttagaggtttgcct
ggagacagaggtgaacctggtgagcccggtgtccctggccctgttggtatgaaaggtctg
tctggggacagaggtgatgtcggcatatcaggcgagcgtggtcatcccggaagccctgga
attaaaggagtggcggggatgcctggcaaccctgggcaaaaaggcgatcgagggtcacct
ggaatggatggcttccagggcatgttgggactcaaaggaagaccagggttccctggagtc
aaaggagaagcagggttctttggagtgcctggtctgaagggcatgcctggagaaccaggt
gttaaaggaaatcgaggggaccggggccccccaggaccacctcctgtcatcctgccaggg
atgaaggacattaaaggagaaaaaggagatgaagggccgatgggcctgaagggctacctg
ggcttgaaaggtatccaaggaatgccaggggtcccagggctggctgggatccctgggcta
cccgggaggcccggctacatcaaaggagtcaagggtgacatcggagtccctggcacaccg
ggcttgccaggacagccaggggtggttggtactcctggaattaccgggttcccaggattc
ataggaagccggggagaaaagggtgctccaggaagagcagggctttttggcgagattggc
cttactggggactttggtgatattggggatactgtggacttaccaggaagcccgggcctg
aagggggaacgaggagtcactggaattccaggtctcaagggaatcttgggagagaaagga
actgagggtgaagttggatttcccgggataacaggcatggctggaccccagggctctcct
ggacttaaaggacagacaggttttccagggctcacaggcctgcaagggccacagggagac
ccgggaaggagcggagtacccggtgacaagggagattacggctggccaggggtatcaggg
ttaccaggttttccaggaatccgggggatcagcggattacacggcctgccaggcaccaaa
ggcttccccggatccccaggagctgacgtccatggagaccccgggttcccaggccctgct
ggagacaggggtgaccgaggagaagccaacacacttccaggccctgtgggagctgcaggg
cagaaaggggagcggggaaccccaggggagcgtggcccagctggaagcccaggacttcag
ggtttccctgggatctctccactatccaacatctctgggtcacctggtgatgtaggggcg
ccaggaatatttggctctgaaggctaccgaggccctccaggaccacctgggccaaacgca
cttcctggaatcaaaggagacgaggggagcgtaggagctgcaggattccctggacagaaa
ggatgggttggggacccagggctccagggccagcccggtgtagttggtcttccaggagag
aaagggcccaagggtgagcaaggattcatgggcaacactgggccctctggggctgtgggt
gacagaggccccaaaggacccaaaggagaccaaggattcccaggtgctcctggctccgtg
ggatccccaggcattccaggcatcccccagaagattgccatccaacctgggaccatgggt
ccccagggcaggagaggccttcccggtgcacagggagagatgggacctcagggccctcct
ggagatccaggtttccgtggggctccaggcaaggctgggccccagggcagaggaggcgtg
tctgctgttccagggttccggggagaccaagggcccatgggacaacagggcccaattggc
caggaaggggagccaggccgtccagggagcccaggcctgccagggatgccgggacgcagc
gtcagcatcggctacctcctggtgaaacacagccagacagaccaggaacccatgtgtcct
gtgggcatgaacaagctctggagtgggtacagcctgctgtacttcgagggccaggagaaa
gcccacaaccaggacctaggtctggcaggctcctgtctggcacgcttcagcactatgccg
tttctgtactgcaatccgggtgacgtctgctactacgccagccgcaatgacaaatcctac
tggctctccaccactgccccattgcccatgatgcctgtggctgaggaagaaatcaagccc
tacatcagccgctgctctgtgtgtgaggccccagctgtggccattgctgtccacagccaa
gatgtctctataccccactgcccagctgggtggcggagcttgtggatcggatattccttc
ctcatgcacaccgcagctggggacgaaggcggcggccagtcgctggtgtcgcccggtagc
tgtctggaggacttccgtgcaacacccttcatcgaatgtaacggaggccgtggaacctgc
cactacttcgctaacaagtacagcttttggctgaccacaatccctgagcagagcttccag
ggcacgccatctgccgacacactcaaggccggcctcatccgcacacatattagccgctgc
caagtgtgcatgaagaacctatag
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integrated database retrieval system
