Cricetulus griseus (Chinese hamster): 107978826
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Entry
107978826 CDS
T02813
Symbol
Atxn1
Name
(RefSeq) ataxin-1
KO
K23616
ataxin 1/1L
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge04330
Notch signaling pathway
cge05017
Spinocerebellar ataxia
cge05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
107978826 (Atxn1)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
107978826 (Atxn1)
05022 Pathways of neurodegeneration - multiple diseases
107978826 (Atxn1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
107978826
NCBI-ProteinID:
XP_027265810
UniProt:
G3GUF4
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All DBs
Position
3:complement(265261760..265668487)
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AA seq
790 aa
AA seq
DB search
MKSNQERSNECLPPKKREIPATSRPSEEKATALPSDNHCVEGVAWLPSTPGSRSHGGGRH
GPAGTSGELGLQGMGLHKALSAGLDYSPPSAPRSVPTATTLPAVYPPPPSGTPVSPVQYA
HLSHTFQFIGSSQYSGPYAGFIPSQLISPSGNPVTSAVASAAGATTPSQRSQLEAYSTLL
ANMGSLSQAPGHKIEPPPQQHLSRAAGLVTPGSPPPTQQNQYIHISSSPQSSGRAASPPP
IPVHLHPHQTMIPHTLTLGPSSQVVVQYSDAGGHFVPRESTKKAESSRLQQAMQAKEVLN
GEMEKSRRYGAPSSVELSLGKASGKSVPHPYESRHVVVHPSPADYSSRDTSGVRGSVMVL
PNNNTPSADLEAQQATHREASPSTLNDKSSLHLGKPGHRSYALSPHTVIQTTHSASEPLP
VGLPATAFYAGTQPPVIGYLSGQQQAITYAGSLPQHLVIPGTQPLLIPVGSPDMDTPGAA
SAIVTSSPQFAAVPHTFVTTALPKSENFNPEALVTQAAYPAMVQAQIHLPVVQSVASPAA
APPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISNDLKIDSSTVERIEDSHSPG
VAVIQFAVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQLFDLPCSKLSVGDVCISL
TLKNLKNGSVKKGQPVDPASVLLKHAKTDSLAGSRHRYAEQENGINQGGTQVLSENGELK
FPEKVGLPAAPFLTKIEPSKPTATRKRRWSAPETRKLEKSEDEPPLTLPKPSLIPQEVKI
CIEGRSNVGK
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaaccaagagaggagcaatgaatgcctgcctcctaaaaaacgtgagatcccc
gccaccagccggccctctgaggagaaggccactgctctgcccagcgacaaccactgcgtg
gagggtgtggcatggctccccagcacccctggcagccgcagccatgggggtgggcggcac
gggccagcagggacttccggggagcttggtttacaaggaatgggtttacataaagcactg
tccgcagggctggactactccccacccagtgcccccaggtcagtccccacagctaccacg
ctgcccgcagtgtaccctcctcctccgtcagggactccagtgtccccagtgcagtatgcc
cacctgtcacacaccttccagttcattgggtcctcccaatacagtgggccctacgctggc
tttatcccttcccagctaatctccccatcaggcaacccggtcaccagtgcggtggcctcg
gctgcaggggccaccactccatcacagcgctcccagctggaggcctattccaccctgctg
gccaacatgggcagtctgagccaggcaccgggacataagattgagcccccaccgcagcag
cacctcagcagggctgcggggctagtcaccccggggtccccgccacccacccagcagaat
cagtacattcatatttccagctctccacagagctctgggcgggcagcatctcccccaccc
attccggtccacctccatccccatcagacgatgatcccgcacacactcaccctggggccc
tcgtcccaggtggtcgtgcaatacagcgatgccggaggccactttgttcctcgagagtcc
accaaaaaagcagaaagcagcaggttgcagcaggctatgcaagccaaggaggtcctgaat
ggggagatggagaagagtcggaggtatggggcaccgtcctctgtggagctgagcctggga
aaggcaagcggcaagtcagtgcctcatccttatgagtcccggcatgtggtggtccaccca
agcccagcagactacagcagtcgtgatacctctggggtccgtggatctgtgatggtcctg
cccaacaacaacacaccctcagctgacctggaggcgcagcaggccacacatcgcgaggcc
tcgccatccaccctcaatgacaagagcagcctgcacttagggaagcccggccaccgctcc
tatgcactgtccccacacacggtcattcagacgacacacagtgcatcagagcctctccca
gtgggcctgccagccacagccttctatgctgggactcagcctcctgtcatcggctacctg
agtggccagcagcaagcaatcacctacgccggcagtctgccccagcacctggtgatccca
ggtacccagcctctgctcatccctgtgggcagccctgacatggacacacctggggcagcc
tcggccatagtcacatcttcaccccagtttgctgcagtgcctcacacgtttgtcaccacc
gccctgcccaagagcgagaacttcaaccccgaggccctggtcacccaggccgcctaccca
gccatggtgcaggcccagatccacctgcccgtggtgcagtcagtggcatcccctgccgcc
gcgccacccacgctgccaccatatttcatgaaaggctccatcatccaactggccaacggg
gagctgaaaaaggtggaggacctgaagacggaggacttcatccagagtgcagagattagt
aatgacctcaagattgactccagcacagtggagaggatcgaagacagccacagccccggt
gtggccgtgatacaattcgccgttggtgaacatcgagcccaggtcagtgttgaagttttg
gtagagtatcctttttttgtgtttggacagggctggtcgtcctgctgtcccgaaagaacc
agccagctctttgatctgccgtgttccaaactctccgttggggacgtttgcatctcgctc
accctcaagaacctgaagaatggctctgttaaaaagggccagcccgtggaccctgccagt
gtcctgctgaagcacgcaaagaccgacagcctggctggcagcagacacagatacgccgag
caagaaaacggaatcaaccagggaggcacccaggtgctctctgagaatggtgaactgaag
tttccagaaaaagtaggattgcctgcagcacccttcctcaccaaaatagagccgagcaag
cccacagccacgcggaagaggaggtggtcggcgccggagacccgcaaactggagaagtcg
gaggacgagccaccgttgactcttcccaagccttcgctcattcctcaggaggttaagatc
tgcattgaaggccgatctaatgtgggcaagtag
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