Cricetulus griseus (Chinese hamster): 113830641
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Entry
113830641 CDS
T02813
Name
(RefSeq) tripartite motif-containing protein 30A isoform X2
KO
K10648
tripartite motif-containing protein 5 [EC:
2.3.2.27
]
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03250
Viral life cycle - HIV-1
cge05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113830641
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
113830641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cge04121
]
113830641
Enzymes [BR:
cge01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113830641
Ubiquitin system [BR:
cge04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
113830641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_4
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-RING_6
zf-Nse
zf-RING_10
TRAF3_RING
DUF1088
Motif
Other DBs
NCBI-GeneID:
113830641
NCBI-ProteinID:
XP_027263705
UniProt:
A0A9J7FQ60
LinkDB
All DBs
Position
3:95363038..95391730
Genome browser
AA seq
501 aa
AA seq
DB search
MASSVLEIIKEEVTCSICLDLMVEPVSTDCGHSFCRACITLNYESIKGKEEEGICPVCGV
TYLFGHLRPNRHVANIVESLLGFKSNPEEEQNVNVCAQHGEKLQLFCEKDMVAICWLCER
SQDHRGHQTALIEEVAHEYKEKLQAALEMQMANEKICDEWEDDLQKERTFWENQIQSDVE
NVQMAFKGLQEFLDFKEKSEKQKLMQEKEDVMNSLAESQNELMKQREAVRDLISDVEHQL
DCSTMEMLQGVNSVLTRSQTLRLKQPKMVLREKRRIFQASDLKGMLEVFHELMDAQHYWV
HVTLPRVYKKNVIINVDKKQIQHQNKNTRNRRMFSIFGTYDLGVLGYPAIHSGKHYWEVD
VSRSDAWLLGLNDGRCAQPQHHGLNKKPFKVMYNSVVKHCVYYQPKHGYWVIGKKNRSVY
NAFENRSVTHNASVLVLSLTHPPSRVGVFLDREACTLSFYDVSNHGALIYKFCEPSFPNT
VYPYFNPMESSEPMTVCGPPS
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggcctcatcagttctggagataatcaaggaggaggtgacctgttctatctgcctggac
ctcatggtggaacctgtgagtacagattgtggtcacagcttttgccgagcctgcatcaca
ctgaactatgaatccatcaaaggcaaagaagaggagggcatctgccctgtgtgtggagtt
acttacctgtttgggcatctgagacctaatcggcatgtggccaacatagtggagagtcta
ctggggttcaagtccaacccagaggaggagcagaatgtcaatgtctgtgcacaacatgga
gagaaacttcagctcttctgtgagaaggacatggtggccatctgctggctttgtgagaga
tctcaggatcaccgtggtcaccaaacagctctcattgaagaggtggcccatgagtacaag
gagaagctccaggctgctctggagatgcagatggcaaatgagaaaatatgtgatgaatgg
gaagatgacctgcaaaaggagagaactttctgggagaaccaaatacagagtgatgtagaa
aatgttcagatggcatttaaaggacttcaggaattcctggacttcaaggagaagagtgag
aagcagaagctgatgcaagagaaggaagatgttatgaacagcctggcagagtctcaaaat
gagctgatgaagcagagggaggcagtgagagacctcatctcagatgtggagcatcagttg
gactgctcaaccatggaaatgctgcagggtgtgaattctgtcctaacaaggagtcagacc
ttaagattaaaacagcccaaaatggtcctaagagaaaagagaaggatcttccaagcttca
gatctgaaaggcatgctggaagtgtttcatgagctcatggatgcccaacactactgggtt
catgtgaccctgcctcgagtctacaagaaaaatgttatcattaatgtggacaaaaaacaa
atacaacatcaaaataagaatacaagaaatagaagaatgtttagtatttttgggacctat
gatttaggtgtccttggatatccagctatccactcagggaaacattactgggaagtagac
gtgtctagaagtgatgcctggctcctgggattaaatgatggaagatgtgctcaaccccaa
catcatggattgaataaaaaacccttcaaagtcatgtataattctgttgttaaacattgt
gtatattatcagcctaaacatggctactgggttataggtaagaagaataggtctgtatat
aatgcctttgaaaatcgttctgtcacccacaatgccagtgtcttggtcctctctctgact
catcctcccagtcgtgttggagttttcctggacagagaagcttgcactctttcattttat
gatgtctccaaccacggagctctcatctataaattctgtgaaccttccttccctaataca
gtttatccatattttaatcctatggaatcatcagagccaatgacagtctgtggaccaccc
tcctaa
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