Cricetulus griseus (Chinese hamster): 113833714
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Entry
113833714 CDS
T02813
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin alpha-11-like
KO
K16493
protocadherin alpha
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
113833714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cge03036
]
113833714
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cge04515
]
113833714
Chromosome and associated proteins [BR:
cge03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
113833714
Cell adhesion molecules [BR:
cge04515
]
Cadherins
Protocadherins
113833714
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_FAT4_N
Ig_Cad99C_N
Cadherin_CELSR2_9th
Ig_CLSTN
Cadherin_C_2
Ig_BT4661_3rd
Motif
Other DBs
NCBI-GeneID:
113833714
NCBI-ProteinID:
XP_035295541
UniProt:
A0A9J7GP83
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Position
2:complement(200525113..200529141)
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AA seq
825 aa
AA seq
DB search
MGVEDRERNYFFKKRKSLNWWHKAFHGSTPEEVDPAFCDLFSGFCSSQPGRQGAASFTXS
VPEEAKHGTFVGRIAQDLGLELAELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREA
LCGRSEECSIHLEVIVDQPLQVFHVEVEVRDINDNPPVFPLGEQKLLIYESKQPDSRFPL
EGASDADIGENAVLVYRLSQNEYFSLESPTNSKQNKRPSLILKKTLDREKTPELNLLLTA
SDGGKPELTGTVRLWVRVLDVNDNDPEFDHLEYKVRIMENAAKETLVIKLNATDRDEGVN
GQLEYSLMSIKPSGRSLFTLDENNGELRVNGTLDYEENKFYEIEVLATDKGTPPMVGHCT
VAVEILDTNDNAPEVTLTSLSLPVREDAQPNTVIALISVSDLDSGVNGQVTCSLTPNVPF
KIIPTFKNYYSLVLDSSLDRERVPTYYLIVTARDGGSPSLWATASVSVEVADVNDNAPAF
AQPEYTVFVKENNPPGAHIFTVLATDADAQENALVSYSLVERRVGERLLSSFVSVHAESG
KVFALQPLDHEELELLQFQVSARDAGVPALGSNVTLQVFVLDENDNAPVLLPHGAVGAGG
AVSELVPRSVGSGHVVTKVRAVDADSGYNAWLSYELQPATGGMRSPFRVGLYTGEISTTR
ALDESDAPRQTVLVLVKDHGEPALTATATVLVSLVESGQAPKSFSQTSGRVSVPEASLVT
VNVYLIIAICAVSSLLVLTLLLYTALRCSATPTEGACAPGKPVLVCSSAVGTWSYSQQRR
QRVCSGEGPPKVDLMAFSPSLPPNLDRDERERQESESNHSGPVSF
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtggaagatagagaacgtaactacttcttcaagaaaagaaaaagtctgaattgg
tggcataaagccttccatggcagcactccagaagaagtggatcctgcattctgcgacctc
ttctctggcttctgctcctcgcagcctgggaggcagggagcggccagcttcactnactcc
gttcccgaagaggccaaacacggcaccttcgtgggccgcatcgctcaggacctggggctg
gagctggccgagctggtgccccgcctgttcagggtggcgtccaaggaccgcggggacctt
ctggaggtaaatctgcagaatggcattttgtttgtgaattctcggatcgaccgggaggcg
ctgtgcgggcggagcgaggagtgtagcatccacctggaggtgatcgtggaccagcctctg
caggttttccacgtggaggtggaggtgagggacattaatgacaaccctccagtgtttcct
cttggagaacaaaagctgctgatttatgaatccaagcaaccagactcgcgttttccgcta
gagggagcttctgatgctgacataggggaaaacgctgtgttggtctacagattaagtcaa
aacgagtatttttctttagaatcaccaacaaatagcaagcagaataaaagaccgtcactc
atattaaagaagaccctggatcgggagaaaaccccggaacttaatttgcttcttacagcc
tcagatgggggaaagccagagctcaccggtacagttcggctttgggttcgtgttttagat
gttaacgacaatgatccggagttcgatcatttagaatacaaggtaagaataatggaaaat
gctgctaaagaaactcttgtcataaagttaaacgccacagatcgagacgaaggtgtcaac
gggcaactggagtactctttgatgtcaatcaagcccagtggaaggtctttatttacacta
gatgaaaacaacggagaattgagggtcaacgggactttggattatgaagaaaataagttt
tatgaaattgaagtgctggccacggataaggggacccccccgatggtaggtcactgtaca
gtcgcggtagaaatcttagacaccaatgacaacgcccctgaagtgacattgacttccctg
tccctcccagtaagagaggatgcccagccaaatacagtcattgctttgattagtgtatct
gatcttgactctggtgtcaatggccaagtgacctgctctcttacacccaatgtccccttc
aagatcatacccacctttaaaaactattattccctggtattggatagcagcctggaccgt
gagagggtgccaacctattatttgattgtgaccgcccgggacgggggctcgccctcgttg
tgggccaccgccagtgtgtccgtggaggtggctgacgtgaacgacaacgctcccgcgttc
gcgcagcccgaatacacggtgttcgtgaaggagaacaaccctcctggcgcgcacatcttc
acggtgttggccacagacgctgacgcgcaggagaacgcgctggtgtcctactctctggtg
gagcggagggtgggcgagcgcttgctgtcgagcttcgtgtctgtgcacgcagagagcggc
aaggtgttcgcgctgcagcctctggaccatgaggagctggagctgctgcagttccaggtg
agcgcgcgggatgctggtgtgcctgccctgggcagcaatgtgactctgcaggtgtttgtg
ctggacgagaacgacaatgcacctgtgctgctgccccacggagctgtgggagccggcgga
gcagtgagcgagcttgtgcctaggtcagtgggttcagggcacgtagtgactaaggtgcgc
gctgtagatgcagactctggttacaacgcatggctctcttatgagctgcagccggcgaca
gggggcatgcgcagtccgtttcgcgtgggtctgtacacgggcgagatcagcacaacgcgt
gccctggatgagtcagatgcccctcgacagactgtattggtgttggtgaaggaccatgga
gagcccgcactgacagccactgcaaccgtgttagtgtctctagtggaaagcggccaggcg
ccaaagtccttttcacagacttcagggcgcgtttcagttccagaggcgtcgctggtgaca
gtcaacgtgtatctgatcatcgccatctgcgcggtgtccagcctgttggtgctcacgctg
ctgctgtacaccgcgctgcgctgctcggcgacgcccaccgaaggagcctgtgctcccgga
aagccggtgctggtgtgctccagcgcggtggggacctggtcatactcgcagcagaggcgg
cagagggtgtgctctggagagggtccgcccaaggtcgacctcatggccttcagccccagt
ctaccccccaacctggatagagatgaaagggaaagacaggaatcagaatcaaatcactct
ggaccggtgagtttttga
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