Cricetulus griseus (Chinese hamster): 113837774
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Entry
113837774 CDS
T02813
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-3-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cge
Cricetulus griseus (Chinese hamster)
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cge03000
]
113837774
Transcription factors [BR:
cge03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113837774
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
113837774
NCBI-ProteinID:
XP_027289152
UniProt:
A0A9J7GNK2
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All DBs
Position
X:11920997..11922335
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AA seq
446 aa
AA seq
DB search
MRPARENASGERSPRVPADFARSTPASLPFPPETPAPRPPSATPTESPGLFPVAAPAPGA
PSPPATLAHLLPAPAMYSLLETELKNPVGPATPAAATGGPAAPGGAGKNSANAGSGATAG
GGGXTAGGGGGGGGGGSDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADW
KLLTDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDKYSLPGGLLPPGAAAP
PPPPPAAAASSPVGVGQRLDTYTHVNGWANGAYSLVQEQLGYAQPPSMSSPPPXPLPQMH
RYDMAGLQYGPMMPPAPRATXTPRAAAAAASGYGGMAPSAAAAAAAAYGQQPATAAAAAA
AAAAMSLGPMGSVVKSEPSSPPPAIASHSQRACLGDLRDMISMYLPPGGDAADAASPLPG
GRLHGVHQHYQGAGTAVNGTVPLTHI
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccagctcgagagaacgcatcaggtgagagaagcccgcgcgttcccgccgacttc
gcgcggagcactcccgccagcctacccttcccgcccgagacgccggctccgcggccccca
agcgccactcccacggagtcccccggccttttccccgtggccgctccagccccgggagcg
ccttctcctcccgccacgctggcgcaccttcttcccgccccggcaatgtacagcctgctg
gagaccgaactcaagaaccccgtagggccggccaccccagcagcggccaccggcggcccc
gcagccccgggcggtgcaggcaagaacagcgcgaacgcaggcagcggcgcgaccgcgggc
ggcgggggcncaacagcgggcggcggcggcggcggcggcggcgggggcagcgaccaggac
cgcgtcaagcggcccatgaacgctttcatggtgtggtcccgcgggcagcggcgcaagatg
gccctggagaaccccaagatgcacaactcggagatcagcaagcgcctgggcgccgactgg
aaactgctgaccgacgccgagaagcggccgttcatcgacgaggccaagcgactgcgtgcc
gtgcacatgaaggagtacccggactacaagtaccggccgcgccgcaagaccaagacgctg
ctcaagaaggacaagtactcgctgcccggcggcctcctgcccccgggcgccgccgcgccg
ccgccgccgccgcccgccgcggccgccagcagcccggtgggcgtgggccagcgcctggac
acgtacacgcacgtgaacggctgggccaacggcgcgtactcgctggtgcaggagcagctg
ggctacgcgcagcccccgagcatgagcagcccgccgccgncgccgctcccgcagatgcac
cgctacgacatggccggcctgcagtacggccccatgatgcccccggcgcccagagctaca
tgaacgccgcgggccgccgccgccgccgcctcgggctacgggggcatggcgccctcggcc
gccgccgccgccgccgccgcctacgggcaacagcccgccaccgccgccgccgcggccgcc
gccgccgccgccatgagcctgggccccatgggctcggtggtcaagtcggagcccagctct
ccgccgcccgccatcgcttcgcactcgcagcgcgcgtgcctcggcgacctgcgcgacatg
atcagcatgtacctgccacctggcggggatgcggctgacgccgcctctcccctccccggc
ggccggctgcacggcgtgcaccagcactaccagggcgccgggactgcagtcaatggaacg
gtgccgctgacccacatctga
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