KEGG   Cricetulus griseus (Chinese hamster): 113838925
Entry
113838925         CDS       T02813                                 
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin SEH1-like
  KO
K14299  nucleoporin SEH1
Organism
cge  Cricetulus griseus (Chinese hamster)
Pathway
cge03013  Nucleocytoplasmic transport
cge04150  mTOR signaling pathway
cge05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:cge00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    113838925
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    113838925
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    113838925
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cge03019]
    113838925
   04131 Membrane trafficking [BR:cge04131]
    113838925
Messenger RNA biogenesis [BR:cge03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     113838925
Membrane trafficking [BR:cge04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    113838925
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_EIPR1 EIF3I Beta-prop_Vps41 WDR55 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Ge1_WD40 Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd
Other DBs
NCBI-GeneID: 113838925
NCBI-ProteinID: XP_027290236
UniProt: A0A9J7GN30
LinkDB
Position
Unknown
AA seq 360 aa
MFLPCSIEADHKDLIHDVSFDFHGHRMATCSSDQSIKVWDKTESGDWHCSASWKTHSGSV
WQVTWAHPEFGQVLVSCSVDRTAAVWEEVVGESNDKLRGQSHWVKRTTLLDSRTSVTDVK
FAPKHMGLMLATCSADGIVRIXEAPDVMNLSQWSLQHEISCKLSCTCISWNPSISPPHYP
MIAVGSNDSSGKAMTMFQIFEYNENTKKYSKAEILMTVTDPVHDIAFALNLGRSFHILAI
ATKDVRIFTLKPVRKELTSSGGPTNFKIHMVAQFDNHNSQVWRVSWNITGTVLASAGDDG
CVRLWKANYMDNWKCTGILNGKGSPVNGSSQLGNSNPSLSSNTPNLQNSLHGSSAGKKHS
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgtttctgccatgcagcatcgaggccgaccacaaggacctcatccacgatgtgtctttc
gactttcacgggcaccggatggccacctgctccagcgaccagagcatcaaagtctgggat
aaaactgaaagtggagattggcattgttctgctagttggaagacacatagtggatccgta
tggcaagtgacatgggctcatcctgaatttggacaggttttggtttcctgttctgttgac
cgaacagcagctgtttgggaagaagtagtaggagaatcaaacgataaacttcgaggccag
agtcactgggtgaagaggacaactctactggacagtagaacatctgttactgatgtgaaa
tttgctcccaaacatatgggtctgatgttagcaacctgttcagcagatggcatagtaaga
atataggaggccccagatgttatgaacctcagccagtggtctctacagcacgagatctca
tgtaagctgagctgtacctgtatttcttggaacccttccatctctcctcctcattacccc
atgatcgcagtgggaagtaatgacagcagtggaaaagcaatgaccatgttccagattttt
gagtacaatgaaaacaccaagaaatactcaaaagcagaaattcttatgacagtcacagat
cctgttcatgatattgcctttgctctgaatttggggagatctttccacatcctggcaata
gccaccaaagatgtaagaattttcacattaaaacctgtgaggaaagaacttacttcttct
ggtggtcccacaaattttaaaatccatatggtggctcagtttgataatcacaactctcag
gtctggagggtgagttggaacataacaggaacagtgctagcatccgcaggagatgatggc
tgcgtgaggttgtggaaagctaattacatggacaattggaagtgtactggtattttgaat
ggtaaaggaagcccagtaaatgggagttctcagctgggaaactcaaatccttcactaagc
tcaaatactccaaatcttcaaaactcattacatggatcttctgctggcaaaaagcacagc
tga

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